iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129968

Ensembl Protein ID

EGY23161

UniProt Accession

G2X3L2; G2X3L2_VERDV

Genbank Protein ID

EGY23161.1

Protein Name

E3 ubiquitin-protein ligase HRD1

Genbank Nucleotide ID

DS572702

Gene Name

VDAG_04599

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_04599	EGY23161	EGY23161

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-08	34.6	346	398

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..............kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++               + p+ lpCgH+ h  Cl+ w        +++ CP+Cr
   Q: 346  CIICREEMrpwdpasnpgalqrIR-PKKLPCGHILHMGCLKSW------LERQQVCPTCR 398
           ******998888888777777666.99****************......**********8 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MRLVWYAGVS TTLATAVVVS AFQQRANFYS AMVYLAQSNF CLLILINFVY LIYGTTVYGL 60
QRIFYGPLRQ TEVEQLSERA WFAITETCLA MTIFRDEIGA WFLVMFTALI TGKVWGWIGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGGCTCG TGTGGTATGC CGGGGTCAGT AAAGCATGAT CAACTCGACA CGCAAGACTG 60
AATGGGTGAA ACTGACGACG ACAGGTCTCG ACGACTCTGG CGACTGCGGT TGTCGTCTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0436--Ligase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR024766--Znf_RING_H2

PROSITE

PS50089--ZF_RING_2

Pfam

PF12678--zf-rbx1

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding

KEGG

vda:VDAG_04599

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000344	Aegilops tauschii	42.73	8.00e-22	96.30
IUUC-Aml-001539	Ailuropoda melanoleuca	29.07	1.00e-42	166.00
IUUC-Atr-002892	Amborella trichopoda	40.96	3.00e-32	131.00
IUUC-Apl-003404	Anas platyrhynchos	32.89	1.00e-14	72.80
IUUC-Aca-004799	Anolis carolinensis	27.84	1.00e-41	162.00
IUUC-Aly-006352	Arabidopsis lyrata	32.86	5.00e-56	209.00
IUUC-Ath-006773	Arabidopsis thaliana	32.45	9.00e-55	206.00
IUUC-Ago-007894	Ashbya gossypii	25.89	7.00e-22	97.10
IUUC-Acl-008041	Aspergillus clavatus	51.38	3.00e-128	450.00
IUUC-Afl-008427	Aspergillus flavus	56.23	4.00e-112	397.00
IUUC-Afu-009023	Aspergillus fumigatus	41.41	5.00e-146	509.00
IUUC-Ani-009133	Aspergillus nidulans	50.00	1.00e-131	462.00
IUUC-Ang-009612	Aspergillus niger	46.84	6.00e-109	386.00
IUUC-Aor-010045	Aspergillus oryzae	56.28	1.00e-128	451.00
IUUC-Ate-010533	Aspergillus terreus	39.53	8.00e-128	449.00
IUUC-Ame-011083	Astyanax mexicanus	29.43	3.00e-44	171.00
IUUC-Bgr-012122	Blumeria graminis	45.39	7.00e-140	489.00
IUUC-Bta-013375	Bos taurus	30.08	6.00e-46	176.00
IUUC-Bci-013675	Botrytis cinerea	67.55	4.00e-143	500.00
IUUC-Bdi-015070	Brachypodium distachyon	41.33	1.00e-31	129.00
IUUC-Bol-015674	Brassica oleracea	31.68	4.00e-55	206.00
IUUC-Bra-016681	Brassica rapa	43.83	8.00e-35	139.00
IUUC-Cel-018422	Caenorhabditis elegans	28.68	1.00e-42	165.00
IUUC-Cja-019779	Callithrix jacchus	29.32	2.00e-40	158.00
IUUC-Cfa-020189	Canis familiaris	28.82	4.00e-44	171.00
IUUC-Cpo-022209	Cavia porcellus	29.57	2.00e-46	178.00
IUUC-Cre-022743	Chlamydomonas reinhardtii	32.20	3.00e-50	190.00
IUUC-Csa-023571	Chlorocebus sabaeus	29.07	5.00e-43	167.00
IUUC-Cho-024889	Choloepus hoffmanni	37.06	1.00e-22	99.40
IUUC-Cin-025215	Ciona intestinalis	31.03	9.00e-14	70.10
IUUC-Csv-026160	Ciona savignyi	40.28	1.00e-28	119.00
IUUC-Cne-027002	Cryptococcus neoformans	34.22	5.00e-68	250.00
IUUC-Cme-027285	Cyanidioschyzon merolae	37.87	8.00e-25	106.00
IUUC-Dre-027999	Danio rerio	29.43	3.00e-45	174.00
IUUC-Dno-029250	Dasypus novemcinctus	29.07	2.00e-42	165.00
IUUC-Dor-030718	Dipodomys ordii	30.03	1.00e-41	162.00
IUUC-Dse-031498	Dothistroma septosporum	49.01	6.00e-101	360.00
IUUC-Dme-031969	Drosophila melanogaster	31.67	1.00e-53	202.00
IUUC-Ete-032962	Echinops telfairi	33.11	2.00e-14	72.00
IUUC-Eca-033258	Equus caballus	29.07	6.00e-43	167.00
IUUC-Eeu-034515	Erinaceus europaeus	45.21	3.00e-11	61.20
IUUC-Fca-035980	Felis catus	29.07	2.00e-43	168.00
IUUC-Fal-037554	Ficedula albicollis	31.95	2.00e-23	101.00
IUUC-Fox-037902	Fusarium oxysporum	56.12	4.00e-175	606.00
IUUC-Fso-038418	Fusarium solani	59.31	6.00e-155	539.00
IUUC-Gmo-039288	Gadus morhua	29.40	2.00e-45	175.00
IUUC-Ggr-040076	Gaeumannomyces graminis	61.98	5.00e-152	530.00
IUUC-Gga-040347	Gallus gallus	38.17	2.00e-24	102.00
IUUC-Gac-042347	Gasterosteus aculeatus	29.69	6.00e-48	183.00
IUUC-Gma-043917	Glycine max	33.25	2.00e-56	211.00
IUUC-Ggo-044858	Gorilla gorilla	29.32	3.00e-45	174.00
IUUC-Hsa-046412	Homo sapiens	29.07	1.00e-42	166.00
IUUC-Hvu-047279	Hordeum vulgare	40.65	2.00e-30	124.00
IUUC-Itr-048924	Ictidomys tridecemlineatus	30.08	5.00e-46	177.00
IUUC-Kpa-049117	Komagataella pastoris	24.22	2.00e-31	128.00
IUUC-Lch-049533	Latimeria chalumnae	45.00	9.00e-17	80.10
IUUC-Lpe-051229	Leersia perrieri	34.29	1.00e-19	89.00
IUUC-Loc-052843	Lepisosteus oculatus	35.81	2.00e-22	97.40
IUUC-Lma-052997	Leptosphaeria maculans	54.55	2.00e-58	218.00
IUUC-Laf-053482	Loxodonta africana	29.32	3.00e-45	174.00
IUUC-Mcc-055075	Macaca mulatta	29.07	8.00e-43	166.00
IUUC-Meu-056683	Macropus eugenii	36.36	1.00e-22	99.40
IUUC-Mor-057082	Magnaporthe oryzae	55.54	2.00e-166	577.00
IUUC-Mpo-057573	Magnaporthe poae	55.60	2.00e-151	527.00
IUUC-Mtr-058639	Medicago truncatula	33.91	1.00e-56	212.00
IUUC-Mla-059168	Melampsora laricipopulina	35.71	2.00e-73	268.00
IUUC-Mga-059510	Meleagris gallopavo	47.56	5.00e-16	75.90
IUUC-Mvi-060515	Microbotryum violaceum	37.20	2.00e-58	219.00
IUUC-Mmr-060922	Microcebus murinus	28.82	4.00e-43	167.00
IUUC-Mdo-062491	Monodelphis domestica	33.16	6.00e-24	103.00
IUUC-Mmu-063770	Mus musculus	29.07	5.00e-43	167.00
IUUC-Mac-064789	Musa acuminata	32.67	2.00e-56	211.00
IUUC-Mpu-066107	Mustela putorius furo	28.96	1.00e-42	165.00
IUUC-Mlu-067918	Myotis lucifugus	29.32	5.00e-42	163.00
IUUC-Nfi-068389	Neosartorya fischeri	42.50	2.00e-142	498.00
IUUC-Ncr-068742	Neurospora crassa	50.83	3.00e-155	540.00
IUUC-Nle-069139	Nomascus leucogenys	29.07	1.00e-42	166.00
IUUC-Opr-070898	Ochotona princeps	36.24	2.00e-23	102.00
IUUC-Ont-071991	Oreochromis niloticus	30.63	3.00e-50	191.00
IUUC-Oan-073717	Ornithorhynchus anatinus	31.40	1.00e-14	73.20
IUUC-Ocu-074065	Oryctolagus cuniculus	30.08	6.00e-45	173.00
IUUC-Oba-075221	Oryza barthii	32.75	6.00e-50	189.00
IUUC-Obr-076914	Oryza brachyantha	41.73	1.00e-30	125.00
IUUC-Ogu-078124	Oryza glumaepatula	32.75	6.00e-50	189.00
IUUC-Oin-080013	Oryza indica	41.73	1.00e-30	125.00
IUUC-Olo-080247	Oryza longistaminata	41.22	6.00e-31	126.00
IUUC-Ome-081769	Oryza meridionalis	32.75	2.00e-52	197.00
IUUC-Oni-082946	Oryza nivara	32.75	4.00e-50	190.00
IUUC-Opu-083268	Oryza punctata	35.29	2.00e-21	95.50
IUUC-Oru-085114	Oryza rufipogon	32.75	6.00e-50	189.00
IUUC-Osa-085829	Oryza sativa	33.00	4.00e-52	197.00
IUUC-Ola-087449	Oryzias latipes	29.43	3.00e-46	177.00
IUUC-Olu-087894	Ostreococcus lucimarinus	32.83	1.00e-51	195.00
IUUC-Oga-089036	Otolemur garnettii	29.07	5.00e-43	167.00
IUUC-Oar-089715	Ovis aries	29.22	1.00e-42	166.00
IUUC-Ptr-091000	Pan troglodytes	30.08	6.00e-46	176.00
IUUC-Pan-092187	Papio anubis	29.07	2.00e-43	168.00
IUUC-Psi-093377	Pelodiscus sinensis	27.68	1.00e-38	152.00
IUUC-Pma-094759	Petromyzon marinus	37.24	1.00e-24	105.00
IUUC-Pno-094883	Phaeosphaeria nodorum	50.13	4.00e-101	360.00
IUUC-Ppa-095684	Physcomitrella patens	44.93	1.00e-30	125.00
IUUC-Pfo-096861	Poecilia formosa	30.20	1.00e-48	185.00
IUUC-Pab-098030	Pongo abelii	30.08	5.00e-46	177.00
IUUC-Pop-099245	Populus trichocarpa	33.50	9.00e-55	206.00
IUUC-Pca-100191	Procavia capensis	29.38	6.00e-44	170.00
IUUC-Ppe-101829	Prunus persica	37.06	2.00e-32	132.00
IUUC-Pva-102689	Pteropus vampyrus	29.07	1.00e-42	165.00
IUUC-Pgr-103286	Puccinia graminis	35.29	6.00e-70	256.00
IUUC-Ptt-103919	Puccinia triticina	34.32	2.00e-66	244.00
IUUC-Pte-104372	Pyrenophora teres	52.07	3.00e-115	407.00
IUUC-Pyt-104456	Pyrenophora triticirepentis	50.74	5.00e-111	393.00
IUUC-Rno-105723	Rattus norvegicus	30.08	3.00e-46	177.00
IUUC-Sce-106348	Saccharomyces cerevisiae	25.06	2.00e-22	98.60
IUUC-Sha-107300	Sarcophilus harrisii	35.81	3.00e-23	101.00
IUUC-Sja-107685	Schizosaccharomyces japonicus	40.26	2.00e-32	132.00
IUUC-Spo-108308	Schizosaccharomyces pombe	38.82	3.00e-29	121.00
IUUC-Ssl-108558	Sclerotinia sclerotiorum	61.26	4.00e-127	446.00
IUUC-Smo-109123	Selaginella moellendorffii	44.76	4.00e-29	120.00
IUUC-Sit-110276	Setaria italica	40.65	2.00e-31	128.00
IUUC-Sly-111819	Solanum lycopersicum	42.66	3.00e-31	127.00
IUUC-Stu-112048	Solanum tuberosum	32.52	3.00e-55	207.00
IUUC-Sar-113397	Sorex araneus	33.11	6.00e-15	73.90
IUUC-Sbi-114192	Sorghum bicolor	34.72	6.00e-32	130.00
IUUC-Sre-115212	Sporisorium reilianum	31.87	9.00e-56	209.00
IUUC-Ssc-116323	Sus scrofa	30.08	6.00e-46	177.00
IUUC-Tgu-116717	Taeniopygia guttata	33.77	4.00e-15	74.70
IUUC-Tru-118045	Takifugu rubripes	29.21	1.00e-47	182.00
IUUC-Tsy-118823	Tarsius syrichta	36.84	7.00e-18	82.80
IUUC-Tni-120106	Tetraodon nigroviridis	38.41	9.00e-25	106.00
IUUC-Tca-121462	Theobroma cacao	40.74	8.00e-32	129.00
IUUC-Tre-122204	Trichoderma reesei	60.20	2.00e-146	511.00
IUUC-Tvi-122550	Trichoderma virens	69.40	7.00e-157	546.00
IUUC-Tae-125239	Triticum aestivum	31.93	3.00e-52	197.00
IUUC-Tur-126538	Triticum urartu	42.73	7.00e-21	94.00
IUUC-Tme-127197	Tuber melanosporum	44.63	2.00e-90	325.00
IUUC-Tbe-127385	Tupaia belangeri	36.36	7.00e-23	100.00
IUUC-Ttr-128795	Tursiops truncatus	29.07	1.00e-42	166.00
IUUC-Uma-129401	Ustilago maydis	31.06	3.00e-45	174.00
IUUC-Vpa-130483	Vicugna pacos	37.23	1.00e-10	60.10
IUUC-Vvi-130944	Vitis vinifera	32.92	1.00e-49	188.00
IUUC-Xtr-131884	Xenopus tropicalis	28.96	8.00e-45	173.00
IUUC-Xma-133488	Xiphophorus maculatus	30.23	1.00e-47	182.00
IUUC-Yli-134552	Yarrowia lipolytica	25.43	1.00e-36	145.00
IUUC-Zma-135530	Zea mays	34.93	1.00e-31	129.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence