iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ame-010881

Ensembl Protein ID

ENSAMXP00000020867.1

UniProt Accession

W5LM05; W5LM05_ASTMX

Genbank Protein ID

ENSAMXP00000020867

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

APWO01059766

Gene Name

LONRF3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMXG00000020270.1	ENSAMXT00000020867.1	ENSAMXP00000020867.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.30e-09	38.3	410	458
E3 activity/RING/RING	4.30e-08	33.8	415	453

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplte 52
           p+++ C++ + l+ +Pv++p+G+t+  +++e++l+++ + cP++++ l+e
   Q: 410  PSDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNPT-CPLCKEDLSE 458
           78999******************************9998.*******976 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+  f + p+++pCgH+f+++Cl++          + +CPlC+
   Q: 415  CSLCMRLFYE-PVTTPCGHTFCLKCLERC------LDHNPTCPLCK 453
           ****999977.***************999......9*********7 PP

Organism

Astyanax mexicanus

Protein Sequence
(Fasta)

MGMERADCML ELAAEAVRSR NFELAAEIYE VQLSRFSDPA ARRELLLRRA DALALHGKLS 60
EALEAYRRAS ELERLCPAQL ENLLRCLSGP ARGRDGARAE SEDTFACGIC GGFLREPVTL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGACCGGC GGGGTGACCG ATTTAATTCC CGCCCAGACG CGCCGGTGTA ACATTGTTTT 60
GTAACAGTTT TAGTGTCCCA CCCAATGAGA AGGGCCGCTC TTGGTCACGT GATGCCGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0802--TPR repeat

Interpro

IPR023114--Elongated_TPR_rpt_dom
IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg

SMART

SM00464--LON
SM00184--RING
SM00028--TPR

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bta-012872	Bos taurus	50.29	2.00e-170	592.00
IUUC-Cre-022730	Chlamydomonas reinhardtii	28.40	3.00e-10	58.90
IUUC-Cne-026875	Cryptococcus neoformans	31.40	4.00e-09	56.60
IUUC-Dno-029518	Dasypus novemcinctus	47.86	7.00e-153	534.00
IUUC-Dor-031132	Dipodomys ordii	48.24	1.00e-169	589.00
IUUC-Fal-036730	Ficedula albicollis	60.39	3.00e-174	604.00
IUUC-Gmo-039110	Gadus morhua	46.95	4.00e-161	561.00
IUUC-Gga-041187	Gallus gallus	57.23	0.00e+00	725.00
IUUC-Gac-042201	Gasterosteus aculeatus	55.70	0.00e+00	717.00
IUUC-Lch-050429	Latimeria chalumnae	55.27	0.00e+00	740.00
IUUC-Loc-051823	Lepisosteus oculatus	62.09	0.00e+00	784.00
IUUC-Mga-060131	Meleagris gallopavo	59.02	2.00e-165	575.00
IUUC-Ont-072029	Oreochromis niloticus	55.76	0.00e+00	732.00
IUUC-Ola-086698	Oryzias latipes	57.73	0.00e+00	780.00
IUUC-Pfo-097284	Poecilia formosa	56.66	0.00e+00	775.00
IUUC-Pab-098343	Pongo abelii	48.54	4.00e-166	578.00
IUUC-Ppe-101621	Prunus persica	40.81	1.00e-38	154.00
IUUC-Pyt-104565	Pyrenophora triticirepentis	38.68	4.00e-38	152.00
IUUC-Rno-105899	Rattus norvegicus	48.74	8.00e-170	590.00
IUUC-Sha-107565	Sarcophilus harrisii	65.41	2.00e-123	436.00
IUUC-Tgu-116978	Taeniopygia guttata	58.46	0.00e+00	677.00
IUUC-Uma-129541	Ustilago maydis	33.20	6.00e-35	143.00
IUUC-Xtr-132508	Xenopus tropicalis	53.15	0.00e+00	677.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence