iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ont-071298

Ensembl Protein ID

ENSONIP00000006309.1

UniProt Accession

I3JBR9; I3JBR9_ORENI

Genbank Protein ID

ENSONIP00000006309

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AERX01034044

Gene Name

rnf19b

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000005016.1	ENSONIT00000006314.1	ENSONIP00000006309.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RBR	6.00e-48	164.0	131	328

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RBR

   S: 1    CkvCllelsveeltvlleCehtfCkeClkqylelkikegqvteiscpaaecpekleeseikellveeelykryekllleevveadaalkw 90
           C++Cl++++ ++l+ ll C+h+ C  Cl+qyl+++i e++ +++scp  ec e+l +++++ +l ++ l+++ye++ll++++++d++++w
   Q: 131  CPLCLVRQPADQLPELLGCSHRSCLCCLRQYLRIEITESR-VQLSCP--ECAERLAPRQVADILDDTALMEKYEEFLLRRCLASDPDCRW 217
           ****************************************.99****..89*************************************** PP
   S: 91   cpapdCslvvllekea..eklevecekcgkefCveCkeewHeglsCkelkeklakteeek....eeaeskelleanskkCpkCkvyiek. 173
           cpapdC ++v+++ +a  ++l +++e+cg efC++Ck++wH++++C+++++++a++ +++     ++++++  ++++k+Cp+C +yi+k 
   Q: 218  CPAPDCGFAVIASGCAscPRLVCRREGCGAEFCYHCKQAWHPNQTCDSARQQRAQSLHTHsnhsPSYTQEQGPADDIKPCPRCGAYIIKm 307
           **************9988999******************************999998777666667788889999*************99 PP
   S: 174  .negCnhmtCakCkaefCwlC 193
            +++CnhmtCa C++efCwlC
   Q: 308  nDGSCNHMTCAVCGCEFCWLC 328
           7889***************** PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MGSEKDSESP HSSVNGVPNP KCRAAGKRQG RISFSLFHGK RSSRGTRAPK GGAATPLSHH 60
HQHHHTQQQL LPSALSSAAA AAAANPTTTT TATTATTPQD AASGTPSKPL SSSQPSLGGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGTGGGGC GGCAACCAGA GAGCGCGAGG CGACGCGGAG CGAGCTGCGG AGATTAGAGT 60
TTTTGCGCTG CGCTCCCGGG GCGCAGGAAA ATCAGTGCGC CGTCACCTGC CAGGAGACCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF01485--IBR

SMART

SM00647--IBR

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002183	Ailuropoda melanoleuca	67.08	0.00e+00	686.00
IUUC-Apl-003468	Anas platyrhynchos	68.74	4.00e-168	584.00
IUUC-Aca-004324	Anolis carolinensis	68.60	0.00e+00	714.00
IUUC-Bta-013135	Bos taurus	68.15	0.00e+00	733.00
IUUC-Bol-016316	Brassica oleracea	32.70	2.00e-16	80.90
IUUC-Cja-019264	Callithrix jacchus	64.94	0.00e+00	670.00
IUUC-Cpo-022502	Cavia porcellus	69.28	0.00e+00	652.00
IUUC-Cho-025032	Choloepus hoffmanni	57.56	5.00e-151	527.00
IUUC-Cin-025143	Ciona intestinalis	60.31	6.00e-41	160.00
IUUC-Dre-028769	Danio rerio	82.76	0.00e+00	1063.00
IUUC-Gac-041619	Gasterosteus aculeatus	91.56	0.00e+00	982.00
IUUC-Hsa-045958	Homo sapiens	68.67	0.00e+00	737.00
IUUC-Itr-048425	Ictidomys tridecemlineatus	68.85	0.00e+00	638.00
IUUC-Lch-049552	Latimeria chalumnae	62.45	0.00e+00	770.00
IUUC-Loc-051738	Lepisosteus oculatus	82.31	0.00e+00	884.00
IUUC-Meu-055920	Macropus eugenii	70.04	0.00e+00	663.00
IUUC-Mdo-061985	Monodelphis domestica	69.07	0.00e+00	744.00
IUUC-Mmu-064262	Mus musculus	68.46	0.00e+00	733.00
IUUC-Mpu-066101	Mustela putorius furo	68.61	0.00e+00	733.00
IUUC-Oan-073219	Ornithorhynchus anatinus	69.01	2.00e-175	608.00
IUUC-Ola-086499	Oryzias latipes	92.83	0.00e+00	1042.00
IUUC-Oga-088812	Otolemur garnettii	69.20	0.00e+00	704.00
IUUC-Oar-090353	Ovis aries	69.04	0.00e+00	649.00
IUUC-Psi-092988	Pelodiscus sinensis	68.32	4.00e-167	581.00
IUUC-Pfo-096268	Poecilia formosa	95.48	0.00e+00	1077.00
IUUC-Pca-100597	Procavia capensis	67.00	5.00e-172	597.00
IUUC-Sha-106512	Sarcophilus harrisii	68.66	0.00e+00	722.00
IUUC-Sar-113233	Sorex araneus	68.38	4.00e-166	578.00
IUUC-Ssc-115781	Sus scrofa	67.80	0.00e+00	751.00
IUUC-Tgu-117384	Taeniopygia guttata	75.29	5.00e-174	603.00
IUUC-Tru-117919	Takifugu rubripes	90.03	0.00e+00	1001.00
IUUC-Tsy-119275	Tarsius syrichta	66.41	1.00e-174	606.00
IUUC-Tbe-127335	Tupaia belangeri	75.95	4.00e-150	524.00
IUUC-Vpa-130407	Vicugna pacos	63.93	1.00e-173	603.00
IUUC-Xtr-132325	Xenopus tropicalis	73.31	1.00e-180	626.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence