iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ola-087223

Ensembl Protein ID

ENSORLP00000004158.1

UniProt Accession

H2LDZ2; H2LDZ2_ORYLA

Genbank Protein ID

ENSORLP00000004158

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04091557

Gene Name

preb

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000003344.1	ENSORLT00000004159.1	ENSORLP00000004158.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-06	28.8	170	194

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf.sd.tllvsGsdDgtikvWDlr 31
           ++f +d  ll++G+ Dg ++vW++ 
   Q: 170  VRFsPDkSLLLTGGTDGHVRVWEFP 194
           678999999*************975 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MGKRRVPDLY RSPFPLYAVR VDPSTGLLIT AGGGGASKTG IKNAVHFLDL QLEGDQQYSA 60
TLLHAHDTDT RATMNMAVGD GVLAAGQDGT CCLLTFKVCS PKQRGAAQSE GNDSQKGSVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTTCCACGG CCGAAACCGA GCTGAGGTCA GCGGGACAGA CGCTGGAGGG AGCAGCGGCC 60
CACAGGTGCG CTAACTGGCC CGACGGAGAG CGTTACGACT TCCTGTCAGA ACCGAGCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

KEGG

ola:101168647

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000155	Aegilops tauschii	24.26	2.00e-10	60.10
IUUC-Aml-001671	Ailuropoda melanoleuca	56.61	6.00e-112	397.00
IUUC-Atr-002477	Amborella trichopoda	23.67	2.00e-12	66.60
IUUC-Aly-005479	Arabidopsis lyrata	26.42	2.00e-15	76.60
IUUC-Ath-007466	Arabidopsis thaliana	25.95	2.00e-14	73.60
IUUC-Ame-010812	Astyanax mexicanus	56.87	3.00e-82	297.00
IUUC-Bta-012386	Bos taurus	57.24	5.00e-119	421.00
IUUC-Bdi-014110	Brachypodium distachyon	26.20	3.00e-15	75.90
IUUC-Bra-017708	Brassica rapa	27.71	5.00e-17	81.60
IUUC-Cel-018480	Caenorhabditis elegans	26.11	1.00e-27	117.00
IUUC-Cja-018998	Callithrix jacchus	56.60	7.00e-121	426.00
IUUC-Cfa-020666	Canis familiaris	57.94	6.00e-115	407.00
IUUC-Cpo-022030	Cavia porcellus	53.95	4.00e-112	397.00
IUUC-Csa-023521	Chlorocebus sabaeus	57.81	2.00e-118	418.00
IUUC-Cin-025431	Ciona intestinalis	31.29	2.00e-41	163.00
IUUC-Dre-027832	Danio rerio	64.25	7.00e-145	506.00
IUUC-Dno-028989	Dasypus novemcinctus	58.04	3.00e-124	437.00
IUUC-Dme-031901	Drosophila melanogaster	35.70	1.00e-56	213.00
IUUC-Ete-032290	Echinops telfairi	57.34	4.00e-116	411.00
IUUC-Eca-033917	Equus caballus	57.94	2.00e-119	422.00
IUUC-Fca-036323	Felis catus	57.01	2.00e-119	422.00
IUUC-Gmo-038693	Gadus morhua	68.17	2.00e-169	588.00
IUUC-Gga-040702	Gallus gallus	56.60	5.00e-113	400.00
IUUC-Gac-042635	Gasterosteus aculeatus	70.33	7.00e-168	583.00
IUUC-Gma-043946	Glycine max	24.14	3.00e-14	72.80
IUUC-Ggo-044648	Gorilla gorilla	56.91	6.00e-115	407.00
IUUC-Hsa-046003	Homo sapiens	57.71	4.00e-120	424.00
IUUC-Itr-048613	Ictidomys tridecemlineatus	57.34	4.00e-121	427.00
IUUC-Lch-049473	Latimeria chalumnae	56.98	1.00e-124	439.00
IUUC-Lpe-051586	Leersia perrieri	24.48	1.00e-16	80.90
IUUC-Loc-052177	Lepisosteus oculatus	62.47	4.00e-144	504.00
IUUC-Laf-054366	Loxodonta africana	56.54	1.00e-120	426.00
IUUC-Mcc-055775	Macaca mulatta	58.24	6.00e-119	420.00
IUUC-Meu-056562	Macropus eugenii	54.67	2.00e-105	375.00
IUUC-Mtr-058661	Medicago truncatula	22.81	3.00e-15	76.30
IUUC-Mvi-060443	Microbotryum violaceum	27.06	2.00e-11	63.50
IUUC-Mmr-061126	Microcebus murinus	58.28	1.00e-120	426.00
IUUC-Mdo-062928	Monodelphis domestica	57.58	3.00e-112	398.00
IUUC-Mmu-064083	Mus musculus	57.71	2.00e-114	405.00
IUUC-Mac-064955	Musa acuminata	29.27	4.00e-16	79.00
IUUC-Mpu-066857	Mustela putorius furo	56.31	6.00e-124	437.00
IUUC-Mlu-067891	Myotis lucifugus	57.71	3.00e-115	407.00
IUUC-Nle-070030	Nomascus leucogenys	56.78	5.00e-115	407.00
IUUC-Opr-070864	Ochotona princeps	62.59	6.00e-88	317.00
IUUC-Ont-072204	Oreochromis niloticus	74.19	0.00e+00	639.00
IUUC-Oan-073643	Ornithorhynchus anatinus	52.88	2.00e-80	292.00
IUUC-Ocu-074217	Oryctolagus cuniculus	57.94	5.00e-113	400.00
IUUC-Oba-075587	Oryza barthii	23.85	2.00e-17	82.80
IUUC-Obr-076826	Oryza brachyantha	25.29	7.00e-19	88.20
IUUC-Ogl-077927	Oryza glaberrima	24.48	1.00e-16	80.50
IUUC-Ogu-078241	Oryza glumaepatula	24.48	2.00e-16	79.70
IUUC-Oin-080217	Oryza indica	25.31	2.00e-16	80.50
IUUC-Olo-081060	Oryza longistaminata	25.31	4.00e-16	79.00
IUUC-Ome-082007	Oryza meridionalis	23.39	9.00e-18	84.30
IUUC-Oni-082827	Oryza nivara	25.31	2.00e-16	80.50
IUUC-Opu-083159	Oryza punctata	24.27	9.00e-17	80.90
IUUC-Oru-085039	Oryza rufipogon	25.31	2.00e-16	80.50
IUUC-Osa-086258	Oryza sativa	25.31	2.00e-16	80.50
IUUC-Oga-088417	Otolemur garnettii	56.07	1.00e-111	396.00
IUUC-Oar-090435	Ovis aries	57.24	2.00e-119	422.00
IUUC-Ptr-090869	Pan troglodytes	57.48	1.00e-112	399.00
IUUC-Pan-092527	Papio anubis	57.81	2.00e-118	418.00
IUUC-Pma-094156	Petromyzon marinus	51.18	3.00e-104	371.00
IUUC-Ppa-095904	Physcomitrella patens	28.14	4.00e-15	75.90
IUUC-Pfo-097488	Poecilia formosa	67.65	3.00e-168	584.00
IUUC-Pab-097720	Pongo abelii	57.24	2.00e-117	415.00
IUUC-Pop-099618	Populus trichocarpa	22.46	3.00e-15	75.90
IUUC-Pca-100288	Procavia capensis	58.40	2.00e-102	365.00
IUUC-Ppe-101864	Prunus persica	24.63	9.00e-15	74.30
IUUC-Pva-103192	Pteropus vampyrus	57.81	4.00e-117	414.00
IUUC-Rno-106123	Rattus norvegicus	56.40	2.00e-114	405.00
IUUC-Sha-107169	Sarcophilus harrisii	58.64	1.00e-113	402.00
IUUC-Smo-109265	Selaginella moellendorffii	28.95	2.00e-15	76.30
IUUC-Sly-111551	Solanum lycopersicum	25.00	6.00e-14	71.60
IUUC-Stu-112264	Solanum tuberosum	25.00	1.00e-12	67.00
IUUC-Sar-113218	Sorex araneus	62.14	4.00e-69	253.00
IUUC-Ssc-115282	Sus scrofa	55.94	2.00e-114	405.00
IUUC-Tru-117866	Takifugu rubripes	69.77	3.00e-170	590.00
IUUC-Tca-121083	Theobroma cacao	27.10	2.00e-15	76.60
IUUC-Tae-124218	Triticum aestivum	25.38	2.00e-14	72.80
IUUC-Tur-126597	Triticum urartu	23.27	3.00e-09	55.50
IUUC-Ttr-128585	Tursiops truncatus	56.64	1.00e-112	399.00
IUUC-Uma-129598	Ustilago maydis	24.07	1.00e-08	54.30
IUUC-Vvi-131024	Vitis vinifera	24.90	2.00e-17	83.60
IUUC-Xma-134081	Xiphophorus maculatus	67.44	2.00e-169	588.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence