iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Cel-018156

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

MIB (MIndBomb) ubiquitin ligase homolog

Genbank Nucleotide ID

BX284603

Gene Name

mib-1; CELE_Y47D3A.22; Y47D3A.22

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
WBGene00012933	Y47D3A.22	Y47D3A.22

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	18636104

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	0.027	15.3	611	645

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 4    CledfkdgplvlpCgH.vfhadClqkwpglknssskefrCPlCr 46
           Cl++  + +++ pCgH v + dC +k+           rCP+Cr
   Q: 611  CLNSVAT-VKLDPCGHrVACVDCTEKV--------AIRRCPVCR 645
           9999999.********666****9888........6668****8 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MNGVAGESPS YDEYLTYFTP GDRILISENH PNHAQRLNSY NNVAWTKTHL ALLGHIGYIE 60
SINEHRHTAN VRVYYAVPQN PELFKLSTEW PLDALEFPQC IDHSKGDLVA ITRGDPEKTT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAATGAGG GTTTTTCCAA ATAAAAACGT GTTATTCTCG GAAAAATACT AGAAAACCAC 60
GGAAAAACGT GTCTAAAACA AAAAACTAAA GCAGAATAAC AAAAAATTAT TTATTTCAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0040--ANK repeat
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0436--Ligase
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR002110--Ankyrin_rpt
IPR020683--Ankyrin_rpt-contain_dom
IPR001370--BIR_rpt
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50297--ANK_REP_REGION
PS50088--ANK_REPEAT
PS50089--ZF_RING_2

Pfam

PF12796--Ank_2

PRINTS

PR01415--ANKYRIN

SMART

SM00248--ANK
SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016874--F:ligase activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

cel:CELE_Y47D3A.22

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001993	Ailuropoda melanoleuca	23.97	2.00e-27	116.00
IUUC-Apl-003867	Anas platyrhynchos	23.87	2.00e-26	113.00
IUUC-Aca-004471	Anolis carolinensis	24.23	2.00e-26	113.00
IUUC-Aly-006101	Arabidopsis lyrata	30.39	1.00e-09	57.00
IUUC-Ath-007301	Arabidopsis thaliana	30.39	9.00e-10	57.00
IUUC-Ame-011923	Astyanax mexicanus	22.41	4.00e-18	85.90
IUUC-Bta-012972	Bos taurus	24.19	8.00e-27	114.00
IUUC-Cja-019044	Callithrix jacchus	23.84	1.00e-26	114.00
IUUC-Cfa-020049	Canis familiaris	24.01	6.00e-27	115.00
IUUC-Cpo-021836	Cavia porcellus	24.06	3.00e-20	92.80
IUUC-Csa-023228	Chlorocebus sabaeus	23.84	8.00e-27	114.00
IUUC-Cho-024456	Choloepus hoffmanni	25.14	1.00e-10	61.20
IUUC-Cin-025703	Ciona intestinalis	24.58	4.00e-12	65.50
IUUC-Dre-028844	Danio rerio	23.21	3.00e-25	109.00
IUUC-Dno-029816	Dasypus novemcinctus	24.01	5.00e-27	115.00
IUUC-Dor-030678	Dipodomys ordii	26.42	6.00e-10	58.50
IUUC-Dme-031616	Drosophila melanogaster	25.29	5.00e-15	75.90
IUUC-Eca-033837	Equus caballus	24.01	5.00e-27	115.00
IUUC-Eeu-035321	Erinaceus europaeus	23.83	6.00e-11	61.60
IUUC-Fca-036568	Felis catus	24.01	6.00e-27	114.00
IUUC-Fal-036757	Ficedula albicollis	23.59	2.00e-26	113.00
IUUC-Gmo-038802	Gadus morhua	21.36	4.00e-23	102.00
IUUC-Gga-040131	Gallus gallus	23.87	2.00e-26	114.00
IUUC-Gac-042061	Gasterosteus aculeatus	21.77	9.00e-25	107.00
IUUC-Ggo-044970	Gorilla gorilla	23.84	8.00e-27	114.00
IUUC-Hsa-046439	Homo sapiens	23.84	8.00e-27	114.00
IUUC-Itr-048215	Ictidomys tridecemlineatus	23.37	2.00e-14	73.60
IUUC-Lch-049427	Latimeria chalumnae	23.72	3.00e-25	109.00
IUUC-Loc-052166	Lepisosteus oculatus	23.60	2.00e-23	103.00
IUUC-Lma-053223	Leptosphaeria maculans	39.58	1.00e-03	38.50
IUUC-Laf-054292	Loxodonta africana	24.01	3.00e-27	115.00
IUUC-Mcc-055748	Macaca mulatta	23.57	3.00e-23	102.00
IUUC-Mga-059408	Meleagris gallopavo	23.87	3.00e-26	112.00
IUUC-Mmr-061628	Microcebus murinus	24.01	5.00e-27	115.00
IUUC-Mdo-062055	Monodelphis domestica	24.05	7.00e-27	114.00
IUUC-Mmu-063520	Mus musculus	24.01	1.00e-26	114.00
IUUC-Mpu-065864	Mustela putorius furo	24.01	4.00e-27	115.00
IUUC-Mlu-067802	Myotis lucifugus	23.66	7.00e-27	114.00
IUUC-Nle-069568	Nomascus leucogenys	23.84	9.00e-27	114.00
IUUC-Opr-070624	Ochotona princeps	22.89	3.00e-17	82.80
IUUC-Ont-072079	Oreochromis niloticus	21.55	4.00e-24	105.00
IUUC-Ocu-073932	Oryctolagus cuniculus	24.01	5.00e-27	115.00
IUUC-Ola-087184	Oryzias latipes	21.53	1.00e-23	104.00
IUUC-Oga-089002	Otolemur garnettii	23.81	7.00e-26	111.00
IUUC-Oar-089440	Ovis aries	24.19	8.00e-27	114.00
IUUC-Ptr-090690	Pan troglodytes	23.84	8.00e-27	114.00
IUUC-Pan-092295	Papio anubis	23.84	8.00e-27	114.00
IUUC-Psi-093964	Pelodiscus sinensis	23.42	1.00e-22	100.00
IUUC-Ppa-095606	Physcomitrella patens	35.29	1.00e-05	43.50
IUUC-Pfo-096821	Poecilia formosa	23.39	2.00e-26	113.00
IUUC-Pab-097804	Pongo abelii	23.84	1.00e-25	110.00
IUUC-Pca-100806	Procavia capensis	23.93	8.00e-20	91.30
IUUC-Pva-102890	Pteropus vampyrus	24.92	1.00e-16	80.90
IUUC-Pte-104027	Pyrenophora teres	39.47	7.00e-03	35.80
IUUC-Rno-105470	Rattus norvegicus	23.66	7.00e-23	101.00
IUUC-Sha-106650	Sarcophilus harrisii	24.05	5.00e-27	115.00
IUUC-Ssc-115706	Sus scrofa	24.01	5.00e-27	115.00
IUUC-Tgu-116863	Taeniopygia guttata	23.73	3.00e-26	113.00
IUUC-Tru-118714	Takifugu rubripes	23.59	3.00e-26	112.00
IUUC-Tsy-119313	Tarsius syrichta	24.01	1.00e-26	114.00
IUUC-Tni-120601	Tetraodon nigroviridis	22.54	2.00e-26	113.00
IUUC-Tbe-127979	Tupaia belangeri	24.57	2.00e-19	89.70
IUUC-Ttr-128673	Tursiops truncatus	24.01	3.00e-27	116.00
IUUC-Vpa-130332	Vicugna pacos	23.56	3.00e-21	95.90
IUUC-Xtr-132967	Xenopus tropicalis	25.00	5.00e-28	118.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence