iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129994

Ensembl Protein ID

EGY17208

UniProt Accession

G2WSW7; G2WSW7_VERDV

Genbank Protein ID

EGY17208.1

Protein Name

Histone deacetylase clr3

Genbank Nucleotide ID

DS572696

Gene Name

VDAG_00890

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_00890	EGY17208	EGY17208

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/ZnF/ZnF_UBP	39.07	1.00e-69	262.00	IUUC-Hsa-046904

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MDGEDWQMRD AAGSNGVAGP QPPPDQGPSV NGTTSSDEEY DEGYDEEYED SEDATVVSQL 60
RRRGQLPTGC CYDDRMKLHC NADFTSHPHH PEDPRRIEEI IKAFKKAGLL YTGPEANVAK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGCTCCTCA AGCCTCGAAG CGCATCACTG GCGTAGCCCC AGATCTGATC GATCCTCCTG 60
GGAATCGGAG GCTTCCCTTC TCGAAAGCTC CCGGTCCCCG GTGTCCCAGA GGTCGACGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR019154--Arb2_domain
IPR000286--His_deacetylse
IPR023801--His_deacetylse_dom
IPR017321--Hist_deAcase_II_yeast

Pfam

PF09757--Arb2
PF00850--Hist_deacetyl

PRINTS

PR01270--HDASUPER

Gene Ontology

GO:0000781--C:chromosome, telomeric region
GO:0031934--C:mating-type region heterochromatin
GO:0031618--C:nuclear pericentric heterochromatin
GO:1990707--C:nuclear subtelomeric heterochromatin
GO:0030874--C:nucleolar chromatin
GO:0033553--C:rDNA heterochromatin
GO:0070824--C:SHREC complex
GO:0031078--F:histone deacetylase activity (H3-K14 specific)
GO:0030702--P:chromatin silencing at centromere
GO:0000183--P:chromatin silencing at rDNA
GO:0030466--P:chromatin silencing at silent mating-type cassette
GO:0006348--P:chromatin silencing at telomere
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0016584--P:nucleosome positioning

KEGG

vda:VDAG_00890

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000749	Aegilops tauschii	35.61	7.00e-61	226.00
IUUC-Aml-002087	Ailuropoda melanoleuca	38.18	1.00e-74	273.00
IUUC-Atr-002745	Amborella trichopoda	34.64	2.00e-67	248.00
IUUC-Apl-003250	Anas platyrhynchos	34.80	2.00e-62	232.00
IUUC-Aca-004303	Anolis carolinensis	41.41	5.00e-82	297.00
IUUC-Aly-006432	Arabidopsis lyrata	36.76	2.00e-67	248.00
IUUC-Ath-007355	Arabidopsis thaliana	37.34	2.00e-70	258.00
IUUC-Ago-007972	Ashbya gossypii	38.52	9.00e-137	479.00
IUUC-Acl-008187	Aspergillus clavatus	49.32	0.00e+00	637.00
IUUC-Afl-008399	Aspergillus flavus	47.43	8.00e-128	448.00
IUUC-Afu-008954	Aspergillus fumigatus	52.69	5.00e-114	403.00
IUUC-Ani-009142	Aspergillus nidulans	46.55	5.00e-164	569.00
IUUC-Ang-009522	Aspergillus niger	43.12	2.00e-87	314.00
IUUC-Aor-010069	Aspergillus oryzae	45.72	1.00e-170	591.00
IUUC-Ate-010291	Aspergillus terreus	45.74	5.00e-169	586.00
IUUC-Ame-010780	Astyanax mexicanus	41.45	8.00e-76	277.00
IUUC-Bta-013052	Bos taurus	41.79	4.00e-68	251.00
IUUC-Bci-013789	Botrytis cinerea	57.37	0.00e+00	837.00
IUUC-Bdi-014007	Brachypodium distachyon	38.02	2.00e-69	255.00
IUUC-Bol-015468	Brassica oleracea	38.12	4.00e-70	257.00
IUUC-Bra-016680	Brassica rapa	38.12	2.00e-70	258.00
IUUC-Cel-018220	Caenorhabditis elegans	38.99	4.00e-68	251.00
IUUC-Cja-019473	Callithrix jacchus	38.57	3.00e-73	268.00
IUUC-Cfa-020263	Canis familiaris	38.57	7.00e-73	267.00
IUUC-Cpo-021691	Cavia porcellus	40.52	6.00e-73	267.00
IUUC-Cre-022561	Chlamydomonas reinhardtii	44.07	3.00e-51	192.00
IUUC-Csa-024223	Chlorocebus sabaeus	39.31	2.00e-74	272.00
IUUC-Csv-026359	Ciona savignyi	40.75	1.00e-63	234.00
IUUC-Cgl-026709	Colletotrichum gloeosporioides	77.08	0.00e+00	967.00
IUUC-Cne-026978	Cryptococcus neoformans	36.24	9.00e-116	409.00
IUUC-Dre-028820	Danio rerio	41.39	1.00e-78	286.00
IUUC-Dno-029160	Dasypus novemcinctus	40.52	8.00e-73	267.00
IUUC-Dor-030859	Dipodomys ordii	40.51	4.00e-81	295.00
IUUC-Dse-031186	Dothistroma septosporum	44.91	8.00e-168	582.00
IUUC-Dme-031766	Drosophila melanogaster	37.25	2.00e-75	275.00
IUUC-Ete-032279	Echinops telfairi	33.24	1.00e-53	202.00
IUUC-Eca-033842	Equus caballus	40.17	3.00e-72	265.00
IUUC-Eeu-034487	Erinaceus europaeus	50.49	5.00e-58	218.00
IUUC-Fca-036430	Felis catus	38.65	2.00e-74	272.00
IUUC-Fox-038067	Fusarium oxysporum	72.62	0.00e+00	900.00
IUUC-Fso-038263	Fusarium solani	72.51	0.00e+00	1079.00
IUUC-Gmo-038473	Gadus morhua	41.30	7.00e-63	234.00
IUUC-Ggr-040062	Gaeumannomyces graminis	64.66	0.00e+00	937.00
IUUC-Gga-040501	Gallus gallus	34.80	3.00e-62	232.00
IUUC-Gac-042335	Gasterosteus aculeatus	35.51	2.00e-65	243.00
IUUC-Gma-043738	Glycine max	37.34	7.00e-69	253.00
IUUC-Ggo-045022	Gorilla gorilla	39.31	2.00e-74	273.00
IUUC-Hsa-046904	Homo sapiens	39.31	2.00e-74	272.00
IUUC-Hvu-047285	Hordeum vulgare	37.53	1.00e-70	258.00
IUUC-Itr-048484	Ictidomys tridecemlineatus	38.96	3.00e-79	288.00
IUUC-Kpa-049281	Komagataella pastoris	38.96	2.00e-141	494.00
IUUC-Lch-050330	Latimeria chalumnae	43.14	1.00e-69	256.00
IUUC-Lpe-051214	Leersia perrieri	35.58	5.00e-70	256.00
IUUC-Loc-052231	Lepisosteus oculatus	35.15	1.00e-61	230.00
IUUC-Lma-053263	Leptosphaeria maculans	46.27	3.00e-175	607.00
IUUC-Laf-053386	Loxodonta africana	41.57	4.00e-73	268.00
IUUC-Mcc-055530	Macaca mulatta	39.31	2.00e-74	273.00
IUUC-Meu-056442	Macropus eugenii	40.67	9.00e-77	279.00
IUUC-Mor-057095	Magnaporthe oryzae	66.72	0.00e+00	982.00
IUUC-Mpo-057389	Magnaporthe poae	62.17	0.00e+00	931.00
IUUC-Mtr-058463	Medicago truncatula	37.15	5.00e-72	263.00
IUUC-Mla-059143	Melampsora laricipopulina	34.50	6.00e-98	349.00
IUUC-Mmr-060637	Microcebus murinus	40.74	4.00e-69	255.00
IUUC-Mdo-062198	Monodelphis domestica	41.65	7.00e-78	283.00
IUUC-Mmu-063346	Mus musculus	39.95	2.00e-75	275.00
IUUC-Mac-064630	Musa acuminata	37.34	9.00e-73	266.00
IUUC-Mpu-065884	Mustela putorius furo	38.67	1.00e-73	269.00
IUUC-Mlu-068117	Myotis lucifugus	40.92	7.00e-71	260.00
IUUC-Nfi-068404	Neosartorya fischeri	48.79	4.00e-180	622.00
IUUC-Ncr-068672	Neurospora crassa	66.67	0.00e+00	1009.00
IUUC-Nle-069868	Nomascus leucogenys	37.82	1.00e-68	252.00
IUUC-Opr-071074	Ochotona princeps	40.41	4.00e-79	287.00
IUUC-Ont-072246	Oreochromis niloticus	37.39	7.00e-77	280.00
IUUC-Oan-073275	Ornithorhynchus anatinus	34.79	5.00e-64	237.00
IUUC-Ocu-074627	Oryctolagus cuniculus	39.59	2.00e-78	285.00
IUUC-Oba-075489	Oryza barthii	37.29	1.00e-69	255.00
IUUC-Obr-076150	Oryza brachyantha	37.01	7.00e-70	256.00
IUUC-Ogl-077437	Oryza glaberrima	35.84	2.00e-70	258.00
IUUC-Ogu-078370	Oryza glumaepatula	35.84	2.00e-70	258.00
IUUC-Oin-079210	Oryza indica	35.84	2.00e-70	258.00
IUUC-Olo-080971	Oryza longistaminata	40.00	6.00e-66	243.00
IUUC-Oni-082031	Oryza nivara	35.84	2.00e-70	258.00
IUUC-Opu-083471	Oryza punctata	36.72	4.00e-69	254.00
IUUC-Oru-084755	Oryza rufipogon	35.84	2.00e-70	258.00
IUUC-Osa-085447	Oryza sativa	35.84	2.00e-70	258.00
IUUC-Ola-087031	Oryzias latipes	34.96	8.00e-65	240.00
IUUC-Oga-089155	Otolemur garnettii	40.00	1.00e-69	256.00
IUUC-Oar-089620	Ovis aries	42.07	2.00e-70	259.00
IUUC-Ptr-091116	Pan troglodytes	35.52	3.00e-65	242.00
IUUC-Pan-092340	Papio anubis	39.31	1.00e-74	273.00
IUUC-Psi-093734	Pelodiscus sinensis	35.25	3.00e-63	235.00
IUUC-Pma-094386	Petromyzon marinus	40.21	5.00e-70	258.00
IUUC-Pno-095131	Phaeosphaeria nodorum	53.39	3.00e-111	393.00
IUUC-Ppa-095550	Physcomitrella patens	40.57	2.00e-71	262.00
IUUC-Pfo-096110	Poecilia formosa	37.23	9.00e-76	276.00
IUUC-Pab-098422	Pongo abelii	37.56	2.00e-68	253.00
IUUC-Pop-099174	Populus trichocarpa	35.92	5.00e-72	263.00
IUUC-Pca-100833	Procavia capensis	39.94	2.00e-71	262.00
IUUC-Ppe-101644	Prunus persica	40.28	3.00e-74	271.00
IUUC-Pva-102410	Pteropus vampyrus	41.21	2.00e-70	259.00
IUUC-Ptt-103841	Puccinia triticina	31.48	2.00e-93	335.00
IUUC-Pte-104383	Pyrenophora teres	45.44	6.00e-172	596.00
IUUC-Pyt-104427	Pyrenophora triticirepentis	46.74	6.00e-160	555.00
IUUC-Rno-105131	Rattus norvegicus	39.60	4.00e-79	288.00
IUUC-Sce-106274	Saccharomyces cerevisiae	38.81	3.00e-134	470.00
IUUC-Sha-106661	Sarcophilus harrisii	41.64	6.00e-72	264.00
IUUC-Sja-107915	Schizosaccharomyces japonicus	43.10	3.00e-145	506.00
IUUC-Spo-108300	Schizosaccharomyces pombe	42.19	3.00e-146	510.00
IUUC-Smo-109615	Selaginella moellendorffii	39.34	7.00e-73	266.00
IUUC-Sit-110160	Setaria italica	37.29	1.00e-66	245.00
IUUC-Sly-111164	Solanum lycopersicum	35.88	8.00e-70	256.00
IUUC-Stu-112685	Solanum tuberosum	39.10	2.00e-67	248.00
IUUC-Sar-113692	Sorex araneus	39.16	8.00e-54	204.00
IUUC-Sbi-114301	Sorghum bicolor	37.75	4.00e-68	250.00
IUUC-Sre-115013	Sporisorium reilianum	34.01	1.00e-96	345.00
IUUC-Ssc-115724	Sus scrofa	40.57	2.00e-67	249.00
IUUC-Tgu-116776	Taeniopygia guttata	34.80	3.00e-62	231.00
IUUC-Tru-117614	Takifugu rubripes	41.24	5.00e-79	288.00
IUUC-Tsy-118807	Tarsius syrichta	38.00	3.00e-66	245.00
IUUC-Tni-119809	Tetraodon nigroviridis	43.47	5.00e-79	287.00
IUUC-Tca-121312	Theobroma cacao	39.89	8.00e-75	273.00
IUUC-Tre-121930	Trichoderma reesei	70.10	0.00e+00	1042.00
IUUC-Tvi-122373	Trichoderma virens	71.26	0.00e+00	1032.00
IUUC-Tae-123064	Triticum aestivum	35.77	7.00e-61	225.00
IUUC-Tme-127027	Tuber melanosporum	48.30	7.00e-86	309.00
IUUC-Tbe-127675	Tupaia belangeri	31.28	3.00e-16	79.30
IUUC-Ttr-128360	Tursiops truncatus	42.49	1.00e-62	233.00
IUUC-Uma-129408	Ustilago maydis	33.63	9.00e-88	316.00
IUUC-Vpa-130525	Vicugna pacos	50.85	7.00e-14	70.90
IUUC-Vvi-131038	Vitis vinifera	40.72	8.00e-76	276.00
IUUC-Xtr-132618	Xenopus tropicalis	40.36	6.00e-78	284.00
IUUC-Xma-133730	Xiphophorus maculatus	39.53	1.00e-75	276.00
IUUC-Yli-134680	Yarrowia lipolytica	38.55	2.00e-131	461.00
IUUC-Zma-135110	Zea mays	37.18	5.00e-67	246.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence