iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	TRANSFAC	RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	92.67	4.00e-146	514.00	IUUC-Hsa-046340

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MRPKVMWHLL RRYMASRLHS LRMGGYLFSG SQAPQLSPAL MRALGQKCPN LKRLCLHVAD 60
LSMVPITSLP STLRTLELHS CEISMIWLQK EQDPTVLPLL ECIVLDRVPA FRDEHLQGLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCAGTCTCT AGTCTGGTCC TCCAAACGGT CGTCAGGCCG CGCCAGTACA GTCCTGGGGC 60
CTCAGGCACT TTCCTAGGAA GGTAGGGATC CTCGGCAGGC CTCGGAAAGT CGCGCCGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032675--L_dom-like

Gene Ontology

GO:0005737--C:cytoplasm
GO:0000151--C:ubiquitin ligase complex
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

rno:313782

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001419	Ailuropoda melanoleuca	91.94	2.00e-144	504.00
IUUC-Aca-004405	Anolis carolinensis	34.96	5.00e-33	134.00
IUUC-Ame-011583	Astyanax mexicanus	38.76	5.00e-06	45.40
IUUC-Bta-013334	Bos taurus	90.11	9.00e-142	496.00
IUUC-Cja-019257	Callithrix jacchus	92.31	1.00e-146	512.00
IUUC-Cfa-020655	Canis familiaris	92.31	6.00e-145	506.00
IUUC-Cpo-021946	Cavia porcellus	82.78	8.00e-123	432.00
IUUC-Csa-024146	Chlorocebus sabaeus	92.67	2.00e-147	514.00
IUUC-Cho-024674	Choloepus hoffmanni	44.50	5.00e-38	150.00
IUUC-Dno-028860	Dasypus novemcinctus	85.71	1.00e-136	479.00
IUUC-Eca-034376	Equus caballus	91.58	1.00e-144	505.00
IUUC-Eeu-035297	Erinaceus europaeus	58.76	8.00e-83	300.00
IUUC-Fca-036044	Felis catus	90.48	2.00e-142	498.00
IUUC-Fal-036630	Ficedula albicollis	31.52	1.00e-24	106.00
IUUC-Gmo-039360	Gadus morhua	30.62	2.00e-13	69.70
IUUC-Gga-040461	Gallus gallus	41.18	1.00e-15	77.00
IUUC-Gac-041737	Gasterosteus aculeatus	38.35	3.00e-13	69.30
IUUC-Ggo-044537	Gorilla gorilla	93.04	2.00e-147	514.00
IUUC-Hsa-046340	Homo sapiens	92.67	2.00e-147	514.00
IUUC-Itr-048279	Ictidomys tridecemlineatus	92.67	6.00e-147	513.00
IUUC-Lch-050320	Latimeria chalumnae	36.92	5.00e-41	161.00
IUUC-Laf-054250	Loxodonta africana	91.58	2.00e-145	508.00
IUUC-Mcc-055154	Macaca mulatta	93.04	2.00e-147	514.00
IUUC-Mmr-060928	Microcebus murinus	91.58	2.00e-145	508.00
IUUC-Mdo-062488	Monodelphis domestica	48.77	5.00e-38	150.00
IUUC-Mmu-063209	Mus musculus	97.80	4.00e-155	540.00
IUUC-Mpu-066145	Mustela putorius furo	92.31	2.00e-145	508.00
IUUC-Nle-069785	Nomascus leucogenys	92.67	2.00e-147	514.00
IUUC-Opr-070335	Ochotona princeps	88.64	3.00e-139	487.00
IUUC-Ont-071234	Oreochromis niloticus	38.46	8.00e-14	71.20
IUUC-Ocu-073801	Oryctolagus cuniculus	91.21	9.00e-143	499.00
IUUC-Ola-087439	Oryzias latipes	40.56	2.00e-17	83.20
IUUC-Oga-088576	Otolemur garnettii	91.58	3.00e-145	507.00
IUUC-Oar-090342	Ovis aries	90.48	1.00e-142	498.00
IUUC-Ptr-090775	Pan troglodytes	92.67	2.00e-147	514.00
IUUC-Pan-092039	Papio anubis	93.04	2.00e-147	514.00
IUUC-Psi-093821	Pelodiscus sinensis	35.66	2.00e-33	135.00
IUUC-Pma-094751	Petromyzon marinus	31.91	2.00e-21	95.90
IUUC-Pfo-096195	Poecilia formosa	40.91	2.00e-14	73.60
IUUC-Pab-098147	Pongo abelii	92.31	2.00e-146	511.00
IUUC-Pca-101020	Procavia capensis	91.21	1.00e-143	501.00
IUUC-Pva-102723	Pteropus vampyrus	91.21	1.00e-143	501.00
IUUC-Sha-107634	Sarcophilus harrisii	43.48	5.00e-38	150.00
IUUC-Ssc-115703	Sus scrofa	93.77	4.00e-147	513.00
IUUC-Tsy-118925	Tarsius syrichta	89.38	6.00e-143	499.00
IUUC-Tni-119768	Tetraodon nigroviridis	36.81	3.00e-15	75.90
IUUC-Tbe-127446	Tupaia belangeri	88.57	6.00e-121	426.00
IUUC-Xtr-132349	Xenopus tropicalis	32.57	1.00e-29	123.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence