iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016380

Ensembl Protein ID

Bo4g045420.1

UniProt Accession

A0A0D3BSM6; A0A0D3BSM6_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo4g045420	Bo4g045420.1	Bo4g045420.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.30e-09	37.1	49	116
E3 adaptor/Cullin RING/DCX/DWD	3.30e-31	107.5	548	585
UBD/Beta-Prp	2.10e-43	150.2	372	673

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           +++lCpI +++ +d   +++G+++   +I  +l+++   cP ++q+lt+++l Pn  l +l ++  +++
   Q: 49   KDLLCPICMQVIKDAFLTACGHSFCYMCIITHLKNKSD-CPCCSQHLTNKQLYPNFLLDKLLKKTSARH 116
           6799******************************9999.****************99988888777666 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+  v+ ++f s++ l+s+s D t+++WD++++ +++
   Q: 548  GHKKAVSYVKFlSNNELASASTDSTLRLWDVKDNLPVR 585
           8999*******9889****************9998876 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkl........lrslsgheaevtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlkghedsv 97
            + ++++ f +d++l+at++ +++ikv+d+++           + ++s  + + +++++++++k  ++++   +++ vwd+ t++ ++ +++he+++
   Q: 372  ANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNepadiqcpIVEMSTRS-KLSCLSWNKHEKnHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRA 467
           567899**************************6559999998888888777.79*****99987566666666************************ PP
   S: 98   lslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdl.ktgkllrtltgghtdsvyslsfdsn 191
           +s++fs++  + lvsGs+d  ++vw ++++  + +++ +  + ++cv+++p + n ++ Gs+D  +  +dl +  + l+ ++g h+++v  ++f sn
   Q: 468  WSVDFSRTEpSMLVSGSDDCKVKVWCTKQEASVLNIDMK--ANICCVKYNPGSsNFIAVGSADHHIHYYDLrNISQPLHVFSG-HKKAVSYVKFLSN 561
           *******888***************88888888655554..459********99*****************556899*****9.************8 PP
   S: 192  gkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn..............ssvisvavls 274
            +el+s+s+d+t++lwd++ +  vrt++ght+  + v ++ n+e+l++gs+ + ++++   +++++k ++ h+              s +is  +++
   Q: 562  -NELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVY---HKEITKPVTSHRfgsldmeeaeeeagSYFISAVCWK 654
           .7*******************************************************9...999999999999999**********99999999*** PP
   S: 275  fgdnvlvlgsedskvniwk 293
            + + ++++ + ++++++ 
   Q: 655  SDSPTMLTANSQGTIKVLV 673
           ***************9975 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MEEIRKDPLV PAVKPDPRTS SIGEGPNRRH ENDEGGSGGL EIGAPDLDKD LLCPICMQVI 60
KDAFLTACGH SFCYMCIITH LKNKSDCPCC SQHLTNKQLY PNFLLDKLLK KTSARHVSKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGAGA TTAGGAAGGA TCCGCTAGTT CCGGCTGTGA AACCCGATCC GAGAACCTCC 60
TCCATCGGAG AAGGCCCCAA CCGCCGCCAC GAAAACGACG AAGGAGGAAG CGGTGGTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0016604--C:nuclear body
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0046283--P:anthocyanin-containing compound metabolic process
GO:0006281--P:DNA repair
GO:0009649--P:entrainment of circadian clock
GO:0009640--P:photomorphogenesis
GO:0048573--P:photoperiodism, flowering
GO:0010119--P:regulation of stomatal movement
GO:0009641--P:shade avoidance

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000885	Aegilops tauschii	70.82	0.00e+00	939.00
IUUC-Aml-001265	Ailuropoda melanoleuca	40.15	9.00e-126	443.00
IUUC-Atr-002460	Amborella trichopoda	73.92	0.00e+00	983.00
IUUC-Apl-003796	Anas platyrhynchos	40.00	6.00e-118	417.00
IUUC-Aca-005078	Anolis carolinensis	40.36	5.00e-125	441.00
IUUC-Aly-006014	Arabidopsis lyrata	93.20	0.00e+00	1283.00
IUUC-Ath-007636	Arabidopsis thaliana	94.08	0.00e+00	1334.00
IUUC-Ame-011176	Astyanax mexicanus	57.02	6.00e-39	155.00
IUUC-Bta-012595	Bos taurus	40.21	3.00e-126	445.00
IUUC-Bdi-014152	Brachypodium distachyon	71.47	0.00e+00	950.00
IUUC-Bra-017690	Brassica rapa	97.19	0.00e+00	1332.00
IUUC-Cja-018926	Callithrix jacchus	40.21	5.00e-126	444.00
IUUC-Cfa-021088	Canis familiaris	40.43	3.00e-125	442.00
IUUC-Cpo-022442	Cavia porcellus	39.56	3.00e-119	422.00
IUUC-Csa-024119	Chlorocebus sabaeus	40.12	1.00e-125	443.00
IUUC-Cho-024883	Choloepus hoffmanni	31.70	2.00e-39	157.00
IUUC-Cin-025375	Ciona intestinalis	39.04	2.00e-121	429.00
IUUC-Cme-027350	Cyanidioschyzon merolae	39.19	2.00e-95	343.00
IUUC-Dre-028453	Danio rerio	38.82	2.00e-121	429.00
IUUC-Dno-029887	Dasypus novemcinctus	40.06	8.00e-126	444.00
IUUC-Dor-031110	Dipodomys ordii	51.63	1.00e-91	330.00
IUUC-Ete-033016	Echinops telfairi	51.63	2.00e-91	330.00
IUUC-Eca-034403	Equus caballus	39.52	3.00e-117	415.00
IUUC-Eeu-034690	Erinaceus europaeus	51.77	3.00e-86	312.00
IUUC-Fca-036475	Felis catus	40.16	4.00e-119	421.00
IUUC-Fal-037189	Ficedula albicollis	40.47	4.00e-124	438.00
IUUC-Gmo-039245	Gadus morhua	38.47	2.00e-119	423.00
IUUC-Gga-040806	Gallus gallus	40.21	2.00e-125	442.00
IUUC-Gac-042177	Gasterosteus aculeatus	37.67	1.00e-119	424.00
IUUC-Gma-044187	Glycine max	76.36	0.00e+00	1049.00
IUUC-Ggo-044430	Gorilla gorilla	36.22	4.00e-77	281.00
IUUC-Hsa-045853	Homo sapiens	40.21	5.00e-126	444.00
IUUC-Itr-048238	Ictidomys tridecemlineatus	51.98	3.00e-68	251.00
IUUC-Lch-050420	Latimeria chalumnae	39.82	3.00e-126	445.00
IUUC-Lpe-051219	Leersia perrieri	72.55	0.00e+00	946.00
IUUC-Loc-052728	Lepisosteus oculatus	40.06	3.00e-119	422.00
IUUC-Laf-053775	Loxodonta africana	39.85	8.00e-126	444.00
IUUC-Meu-056595	Macropus eugenii	39.72	9.00e-56	211.00
IUUC-Mtr-058555	Medicago truncatula	76.83	0.00e+00	1077.00
IUUC-Mga-059646	Meleagris gallopavo	40.00	6.00e-118	417.00
IUUC-Mmr-060990	Microcebus murinus	40.15	1.00e-125	443.00
IUUC-Mdo-062287	Monodelphis domestica	40.21	1.00e-125	443.00
IUUC-Mmu-064097	Mus musculus	40.21	3.00e-126	445.00
IUUC-Mac-065240	Musa acuminata	74.68	0.00e+00	968.00
IUUC-Mpu-066612	Mustela putorius furo	39.84	8.00e-119	420.00
IUUC-Mlu-067967	Myotis lucifugus	39.71	3.00e-117	415.00
IUUC-Nle-069543	Nomascus leucogenys	40.21	4.00e-126	445.00
IUUC-Opr-070366	Ochotona princeps	43.78	8.00e-44	171.00
IUUC-Ont-071522	Oreochromis niloticus	38.56	5.00e-125	441.00
IUUC-Oan-073409	Ornithorhynchus anatinus	40.10	3.00e-117	415.00
IUUC-Ocu-073756	Oryctolagus cuniculus	40.00	3.00e-121	428.00
IUUC-Oba-075149	Oryza barthii	72.76	0.00e+00	961.00
IUUC-Obr-076563	Oryza brachyantha	73.53	0.00e+00	965.00
IUUC-Ogl-077701	Oryza glaberrima	73.11	0.00e+00	966.00
IUUC-Ogu-078383	Oryza glumaepatula	73.11	0.00e+00	966.00
IUUC-Oin-079965	Oryza indica	69.18	0.00e+00	885.00
IUUC-Olo-080639	Oryza longistaminata	71.12	0.00e+00	949.00
IUUC-Ome-081821	Oryza meridionalis	72.48	0.00e+00	890.00
IUUC-Oni-082622	Oryza nivara	73.11	0.00e+00	966.00
IUUC-Opu-083295	Oryza punctata	72.96	0.00e+00	964.00
IUUC-Oru-084661	Oryza rufipogon	73.11	0.00e+00	966.00
IUUC-Osa-085766	Oryza sativa	73.11	0.00e+00	966.00
IUUC-Ola-086727	Oryzias latipes	39.27	2.00e-125	442.00
IUUC-Oga-088215	Otolemur garnettii	39.84	3.00e-121	429.00
IUUC-Oar-089880	Ovis aries	39.84	3.00e-121	428.00
IUUC-Ptr-090597	Pan troglodytes	40.21	5.00e-126	444.00
IUUC-Pan-091987	Papio anubis	40.21	2.00e-126	446.00
IUUC-Psi-094033	Pelodiscus sinensis	40.25	1.00e-121	429.00
IUUC-Pma-094587	Petromyzon marinus	38.62	1.00e-106	380.00
IUUC-Ppa-095401	Physcomitrella patens	62.30	0.00e+00	838.00
IUUC-Pfo-097388	Poecilia formosa	37.69	2.00e-122	432.00
IUUC-Pab-098029	Pongo abelii	40.21	4.00e-126	445.00
IUUC-Pop-099319	Populus trichocarpa	75.48	0.00e+00	1071.00
IUUC-Pca-100846	Procavia capensis	47.22	2.00e-104	373.00
IUUC-Ppe-101250	Prunus persica	67.81	0.00e+00	873.00
IUUC-Pva-102407	Pteropus vampyrus	40.06	1.00e-122	433.00
IUUC-Rno-105312	Rattus norvegicus	40.21	3.00e-126	445.00
IUUC-Sha-106514	Sarcophilus harrisii	47.44	1.00e-99	355.00
IUUC-Smo-109418	Selaginella moellendorffii	62.93	0.00e+00	793.00
IUUC-Sit-110248	Setaria italica	73.27	0.00e+00	968.00
IUUC-Sly-110895	Solanum lycopersicum	76.81	0.00e+00	1068.00
IUUC-Stu-112386	Solanum tuberosum	73.93	0.00e+00	1015.00
IUUC-Sar-113230	Sorex araneus	43.19	2.00e-68	253.00
IUUC-Sbi-113962	Sorghum bicolor	70.20	0.00e+00	943.00
IUUC-Ssc-115987	Sus scrofa	29.66	2.00e-27	116.00
IUUC-Tgu-116471	Taeniopygia guttata	40.00	5.00e-124	437.00
IUUC-Tru-118231	Takifugu rubripes	47.47	1.00e-105	376.00
IUUC-Tsy-119415	Tarsius syrichta	39.66	1.00e-117	416.00
IUUC-Tni-120893	Tetraodon nigroviridis	47.47	1.00e-105	376.00
IUUC-Tca-121619	Theobroma cacao	78.13	0.00e+00	1108.00
IUUC-Tae-125524	Triticum aestivum	72.22	0.00e+00	967.00
IUUC-Tur-126557	Triticum urartu	72.28	0.00e+00	946.00
IUUC-Tbe-127253	Tupaia belangeri	43.46	9.00e-70	258.00
IUUC-Ttr-129100	Tursiops truncatus	39.69	1.00e-116	413.00
IUUC-Vpa-130613	Vicugna pacos	36.34	8.00e-102	363.00
IUUC-Vvi-131386	Vitis vinifera	73.42	0.00e+00	1028.00
IUUC-Xtr-132033	Xenopus tropicalis	40.09	4.00e-132	465.00
IUUC-Xma-133421	Xiphophorus maculatus	37.69	1.00e-122	434.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence