iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095401

Ensembl Protein ID

PP1S135_17V6.1

UniProt Accession

A9SXX8; A9SXX8_PHYPA

Genbank Protein ID

EDQ63956.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545024

Gene Name

PHYPADRAFT_167057

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S135_17V6	PP1S135_17V6.1	PP1S135_17V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.80e-28	96.1	488	521
E3 activity/RING/U-box	3.50e-09	37.3	50	111

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           H+ + ++++f  +d t+lvsGsdDg++k+W +r+
   Q: 488  HEKRAWSVDFsrTDpTMLVSGSDDGKVKIWCTRQ 521
           888899*****9889***************9876 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliq 66
           ++flCpI  + M+d   +++G+++  ++I  +l+++ + cP ++  lt+++l Pn  l +l  
   Q: 50   KDFLCPICIQTMKDAFLTACGHSFCYTCIMTHLSNKSN-CPCCGLYLTNNQLFPNFLLNKLLG 111
           68*******************************99999.****************99987765 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MEGGGPFTQG SAGPHVPSVA EVKQEPRTGS WSSEDNKYEV AMATKPALDK DFLCPICIQT 60
MKDAFLTACG HSFCYTCIMT HLSNKSNCPC CGLYLTNNQL FPNFLLNKLL GKASASHLVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGGAG GAGGTCCTTT CACCCAGGGT TCAGCAGGAC CTCATGTTCC CTCCGTAGCA 60
GAGGTTAAGC AAGAACCAAG GACGGGCTCC TGGTCGTCTG AGGACAATAA ATATGAGGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00184--RING
SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

ppp:PHYPADRAFT_167057

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000885	Aegilops tauschii	63.44	0.00e+00	827.00
IUUC-Atr-002460	Amborella trichopoda	64.70	0.00e+00	854.00
IUUC-Aly-006014	Arabidopsis lyrata	62.08	0.00e+00	870.00
IUUC-Ath-007636	Arabidopsis thaliana	62.66	0.00e+00	882.00
IUUC-Bdi-014152	Brachypodium distachyon	63.70	0.00e+00	838.00
IUUC-Bol-016380	Brassica oleracea	61.73	0.00e+00	867.00
IUUC-Bra-017690	Brassica rapa	61.13	0.00e+00	843.00
IUUC-Gmo-039245	Gadus morhua	37.86	2.00e-127	448.00
IUUC-Gac-042177	Gasterosteus aculeatus	38.78	4.00e-128	451.00
IUUC-Gma-044187	Glycine max	62.54	0.00e+00	830.00
IUUC-Lpe-051219	Leersia perrieri	63.08	0.00e+00	824.00
IUUC-Mtr-058555	Medicago truncatula	60.94	0.00e+00	859.00
IUUC-Mac-065240	Musa acuminata	63.49	0.00e+00	855.00
IUUC-Opr-070366	Ochotona princeps	43.41	1.00e-44	174.00
IUUC-Ont-071522	Oreochromis niloticus	37.65	8.00e-128	450.00
IUUC-Oba-075149	Oryza barthii	61.43	0.00e+00	843.00
IUUC-Obr-076563	Oryza brachyantha	64.17	0.00e+00	844.00
IUUC-Ogl-077701	Oryza glaberrima	61.82	0.00e+00	850.00
IUUC-Ogu-078383	Oryza glumaepatula	61.82	0.00e+00	850.00
IUUC-Oin-079965	Oryza indica	60.79	0.00e+00	769.00
IUUC-Olo-080639	Oryza longistaminata	62.70	0.00e+00	834.00
IUUC-Ome-081821	Oryza meridionalis	64.14	0.00e+00	784.00
IUUC-Oni-082622	Oryza nivara	61.82	0.00e+00	850.00
IUUC-Opu-083295	Oryza punctata	64.58	0.00e+00	848.00
IUUC-Oru-084661	Oryza rufipogon	61.82	0.00e+00	850.00
IUUC-Osa-085766	Oryza sativa	61.82	0.00e+00	850.00
IUUC-Pfo-097388	Poecilia formosa	38.64	5.00e-128	451.00
IUUC-Pop-099319	Populus trichocarpa	64.12	0.00e+00	861.00
IUUC-Smo-109418	Selaginella moellendorffii	68.10	0.00e+00	901.00
IUUC-Sit-110248	Setaria italica	64.44	0.00e+00	842.00
IUUC-Sly-110895	Solanum lycopersicum	62.09	0.00e+00	886.00
IUUC-Stu-112386	Solanum tuberosum	60.88	0.00e+00	831.00
IUUC-Sbi-113962	Sorghum bicolor	62.03	0.00e+00	822.00
IUUC-Tru-118231	Takifugu rubripes	39.05	8.00e-124	437.00
IUUC-Tca-121619	Theobroma cacao	64.28	0.00e+00	865.00
IUUC-Tae-125524	Triticum aestivum	64.15	0.00e+00	853.00
IUUC-Tur-126557	Triticum urartu	64.97	0.00e+00	832.00
IUUC-Vvi-131386	Vitis vinifera	62.57	0.00e+00	837.00
IUUC-Xma-133421	Xiphophorus maculatus	38.79	1.00e-127	449.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence