iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113889

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G175200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g021970	Sb08g021970.1	Sb08g021970.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-08	36.1	116	158

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl d+   d+++ lp C H+fh+ C+ +w       +++ +CP+Cr
   Q: 116  CAVCLADYvdGDELRRLPgCRHAFHRGCVDQW------LRRRPTCPVCR 158
           ********77445999999*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MTKDTVLIAA SVAALVVFSA ATFLCSWRRR RRRAQSASQR RDAAGDDVEL GHGRGGAAAG 60
GIDEAVLAAY PTLLYSSSSS EKEKDDEEAA ARDGARGEPE EEEAAAGGAG SDAARCAVCL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCAAGG ACACCGTGCT GATCGCCGCC TCCGTGGCCG CGCTGGTCGT GTTCTCGGCC 60
GCCACGTTCC TGTGCTCCTG GCGGCGGCGG AGGAGGCGCG CGCAGTCGGC GTCCCAGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_08g021970

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001148	Aegilops tauschii	47.47	2.00e-27	114.00
IUUC-Bdi-014861	Brachypodium distachyon	47.45	1.00e-15	74.30
IUUC-Lpe-051665	Leersia perrieri	52.17	2.00e-23	103.00
IUUC-Oba-075023	Oryza barthii	87.50	5.00e-18	82.40
IUUC-Ogu-079023	Oryza glumaepatula	87.80	3.00e-18	84.70
IUUC-Oin-079910	Oryza indica	87.50	5.00e-18	82.40
IUUC-Ome-081509	Oryza meridionalis	77.78	4.00e-17	79.70
IUUC-Opu-083765	Oryza punctata	52.68	3.00e-19	88.20
IUUC-Oru-084624	Oryza rufipogon	87.80	2.00e-18	85.50
IUUC-Osa-085648	Oryza sativa	87.50	1.00e-17	81.30
IUUC-Tae-125918	Triticum aestivum	51.90	3.00e-23	99.80
IUUC-Tur-126851	Triticum urartu	76.74	4.00e-17	79.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence