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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Mmu-063646
Ensembl Protein ID ENSMUSP00000038580.8
UniProt Accession Q91WM3; Q8CFB7; U3IP2_MOUSE
Genbank Protein ID AAN62792.1; AAN62794.1; BAC36193.1; AAH14703.1
Protein Name U3 small nucleolar RNA-interacting protein 2; RRP9 homolog; U3 small nucleolar ribonucleoprotein-associated 55 kDa protein
Genbank Nucleotide ID AF368232; AF368234; AK076113; BC014703
Gene Name Rrp9; Rnu3ip2; U3-55k
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMUSG00000041506.15 ENSMUST00000047721.9 ENSMUSP00000038580.8
ENSMUSG00000041506.15 ENSMUST00000185336.1 ENSMUSP00000140949.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressGXD
DNA & RNA Element
AREsitemicroRNATRANSFACRepTar
miRNAMapRAID2
Protein-protein Interaction
IIDiRefIndexPINAHINT
Mentha
Post-translational Modifications (PTMs)
dbPAFPhosphositePlusdbPTMPhospho.ELM
UniProtPHOSIDA
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.20e-29 102.1 322 356
UBD/Beta-Prp 9.90e-42 144.2 145 406
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgv 34
           gH++s+ c+++ ++ ++vsG+dDg++ +W l++ +
   Q: 322  GHQGSIDCIHLiNEEHMVSGADDGSVALWGLSKKR 356
           8*********9999***************987665 PP
   

   UBD/Beta-Prp
   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkl...........lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkc 86
           h+  itc+ ++pd+  ++++ +d ti+ w+v+tg +             +  gh++ v ++ +s+dgk+l++g + ++i +w+ ++++ 
   Q: 145  HQLSITCLVITPDDLAIFSAAKDCTIIKWSVETGRKlhviprakkgaQGQPAGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQH 233
           66789999999***********************99999999999988889999999******************************** PP
   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl 175
           ++t++gh d v  l+f + ++ l s+shdr ++vw+  +++ +e tl gh+++v  +   + ++++ +G+ D+tvr+W+++ ++ l   
   Q: 234  LYTFTGHRDAVSGLAFRKGTHQLYSTSHDRSVKVWNAAENSYVE-TLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIPEESQLVFY 321
           ******************99***********************9.***********************************999988755 PP
   S: 176  tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght...........dnvksvrfspnderlvsgssDgsiriWdlr 252
            g h++s+ ++ +  + +++vsg++dg+v lw l++++ +  +++              +v+sv+++ n++++++gs+   +r+W + 
   Q: 322  -G-HQGSIDCIHLINE-EHMVSGADDGSVALWGLSKKRPLALQREAHglhgepgleqpFWVSSVAALLNTDLVATGSHNARVRLWQCG 406
           .6.*********8886.7*****************999977777655588999999999**************************875 PP
   
Organism Mus musculus
Functional Description
(View)

Functional Description


     Component of a nucleolar small nuclear ribonucleoprotein particle (snoRNP) thought to participate in the processing and modification of pre-ribosomal RNA.
 Component of a nucleolar small nuclear ribonucleoprotein particle (snoRNP) thought to participate in the processing and modification of pre-ribosomal RNA.
Protein Sequence
(Fasta)
MSTAVATRKR AKPAPGPGAA PVAGKRRRKV DSAADRGKSK GGGKMNEEIS SDSESESLAP 60
RKTEEEEEEE LEETAQEKKL RLAKLYLEQL RQQEEEKAEA RAFEEDQVAG RLKEDVLEQR 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Mmu-063646|E3,WD_repeat;UBD,Beta-Prp|Mus musculus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTTTTGGAGC CATGGTTCTC CTGGGGCAAG AGGTAGGGAG CGTTCAGATT TGCCCTTTAG 60
GAGGCTGGCC TCCTACTCCT TGGTTTACAT ATCCCCATCT CCAAACCTGC ACTTTGTACC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Mmu-063646|E3,WD_repeat;UBD,Beta-Prp|Mus musculus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0488--Methylation
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0687--Ribonucleoprotein
KW-0694--RNA-binding
KW-0698--rRNA processing
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0031428--C:box C/D snoRNP complex
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0003723--F:RNA binding
GO:0030515--F:snoRNA binding
GO:0034511--F:U3 snoRNA binding
GO:0006364--P:rRNA processing
KEGG mmu:27966
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000586 Aegilops tauschii 34.29 3.00e-57 216.00
IUUC-Aml-002072 Ailuropoda melanoleuca 92.13 0.00e+00 749.00
IUUC-Atr-002824 Amborella trichopoda 37.76 4.00e-72 265.00
IUUC-Apl-003264 Anas platyrhynchos 75.34 1.00e-167 582.00
IUUC-Aca-004898 Anolis carolinensis 72.41 0.00e+00 637.00
IUUC-Aly-005535 Arabidopsis lyrata 37.96 7.00e-66 244.00
IUUC-Ath-007119 Arabidopsis thaliana 36.39 1.00e-71 264.00
IUUC-Ago-007710 Ashbya gossypii 28.34 2.00e-57 216.00
IUUC-Acl-008345 Aspergillus clavatus 32.93 8.00e-57 214.00
IUUC-Afl-008718 Aspergillus flavus 32.27 4.00e-55 209.00
IUUC-Afu-008966 Aspergillus fumigatus 29.37 2.00e-54 207.00
IUUC-Ani-009214 Aspergillus nidulans 31.60 2.00e-57 216.00
IUUC-Ang-009774 Aspergillus niger 32.84 3.00e-58 219.00
IUUC-Aor-009956 Aspergillus oryzae 32.27 4.00e-55 209.00
IUUC-Ate-010449 Aspergillus terreus 29.87 2.00e-55 210.00
IUUC-Ame-011860 Astyanax mexicanus 70.23 1.00e-167 582.00
IUUC-Bgr-012213 Blumeria graminis 30.67 2.00e-62 233.00
IUUC-Bta-012698 Bos taurus 90.95 0.00e+00 739.00
IUUC-Bci-013973 Botrytis cinerea 27.85 5.00e-59 222.00
IUUC-Bdi-014790 Brachypodium distachyon 36.65 8.00e-64 238.00
IUUC-Bol-016068 Brassica oleracea 37.83 9.00e-67 247.00
IUUC-Bra-017410 Brassica rapa 35.98 3.00e-62 233.00
IUUC-Cel-018616 Caenorhabditis elegans 37.01 7.00e-74 271.00
IUUC-Cja-019532 Callithrix jacchus 89.68 0.00e+00 738.00
IUUC-Cfa-020961 Canis familiaris 88.89 0.00e+00 741.00
IUUC-Cpo-021527 Cavia porcellus 89.29 0.00e+00 747.00
IUUC-Csa-023106 Chlorocebus sabaeus 94.78 0.00e+00 761.00
IUUC-Cin-025670 Ciona intestinalis 52.17 2.00e-124 439.00
IUUC-Csv-026172 Ciona savignyi 51.92 4.00e-117 414.00
IUUC-Cgl-026619 Colletotrichum gloeosporioides 32.06 2.00e-62 233.00
IUUC-Cne-027070 Cryptococcus neoformans 30.13 2.00e-47 183.00
IUUC-Cme-027125 Cyanidioschyzon merolae 26.58 3.00e-32 133.00
IUUC-Dre-027919 Danio rerio 66.67 1.00e-157 549.00
IUUC-Dno-029684 Dasypus novemcinctus 94.65 6.00e-170 590.00
IUUC-Dor-030363 Dipodomys ordii 86.70 7.00e-106 377.00
IUUC-Dse-031503 Dothistroma septosporum 31.20 6.00e-59 221.00
IUUC-Dme-031979 Drosophila melanogaster 44.56 2.00e-97 349.00
IUUC-Eca-033735 Equus caballus 93.75 0.00e+00 725.00
IUUC-Fca-036193 Felis catus 92.17 0.00e+00 737.00
IUUC-Fal-037058 Ficedula albicollis 70.57 1.00e-168 586.00
IUUC-Fox-038036 Fusarium oxysporum 31.41 4.00e-62 232.00
IUUC-Fso-038298 Fusarium solani 32.46 1.00e-61 231.00
IUUC-Gmo-038796 Gadus morhua 64.99 8.00e-143 500.00
IUUC-Ggr-040074 Gaeumannomyces graminis 31.73 2.00e-51 197.00
IUUC-Gga-040743 Gallus gallus 79.26 1.00e-136 479.00
IUUC-Gac-042583 Gasterosteus aculeatus 64.07 7.00e-166 577.00
IUUC-Gma-042659 Glycine max 39.55 7.00e-81 294.00
IUUC-Ggo-045543 Gorilla gorilla 92.42 0.00e+00 760.00
IUUC-Hsa-047017 Homo sapiens 94.78 0.00e+00 761.00
IUUC-Hvu-047173 Hordeum vulgare 38.22 4.00e-70 258.00
IUUC-Itr-048062 Ictidomys tridecemlineatus 86.95 0.00e+00 752.00
IUUC-Kpa-049262 Komagataella pastoris 32.23 8.00e-58 218.00
IUUC-Lch-050566 Latimeria chalumnae 72.58 3.00e-157 548.00
IUUC-Lpe-051651 Leersia perrieri 36.58 2.00e-68 253.00
IUUC-Loc-051997 Lepisosteus oculatus 70.64 2.00e-165 575.00
IUUC-Lma-053182 Leptosphaeria maculans 29.90 8.00e-60 224.00
IUUC-Laf-054105 Loxodonta africana 93.40 0.00e+00 718.00
IUUC-Mcc-055215 Macaca mulatta 94.56 0.00e+00 761.00
IUUC-Meu-055943 Macropus eugenii 80.34 0.00e+00 651.00
IUUC-Mor-057069 Magnaporthe oryzae 32.40 2.00e-61 230.00
IUUC-Mpo-057358 Magnaporthe poae 30.25 6.00e-50 192.00
IUUC-Mtr-058209 Medicago truncatula 39.10 3.00e-80 292.00
IUUC-Mla-059043 Melampsora laricipopulina 26.60 4.00e-47 182.00
IUUC-Mga-060024 Meleagris gallopavo 74.77 1.00e-153 535.00
IUUC-Mvi-060371 Microbotryum violaceum 32.02 1.00e-67 251.00
IUUC-Mmr-061403 Microcebus murinus 94.62 0.00e+00 744.00
IUUC-Mdo-063026 Monodelphis domestica 77.45 0.00e+00 666.00
IUUC-Mac-064801 Musa acuminata 37.78 6.00e-77 281.00
IUUC-Mpu-065760 Mustela putorius furo 90.11 0.00e+00 755.00
IUUC-Mlu-067963 Myotis lucifugus 93.72 0.00e+00 737.00
IUUC-Nfi-068288 Neosartorya fischeri 31.45 3.00e-58 219.00
IUUC-Ncr-068679 Neurospora crassa 32.85 1.00e-55 211.00
IUUC-Nle-069766 Nomascus leucogenys 84.03 0.00e+00 678.00
IUUC-Opr-070906 Ochotona princeps 93.03 0.00e+00 757.00
IUUC-Ont-071661 Oreochromis niloticus 62.08 1.00e-167 582.00
IUUC-Oan-073465 Ornithorhynchus anatinus 65.70 3.00e-148 518.00
IUUC-Ocu-074263 Oryctolagus cuniculus 93.05 0.00e+00 747.00
IUUC-Oba-075607 Oryza barthii 38.44 2.00e-63 236.00
IUUC-Ogl-077387 Oryza glaberrima 37.83 4.00e-67 248.00
IUUC-Ogu-078323 Oryza glumaepatula 38.67 2.00e-67 249.00
IUUC-Oin-079977 Oryza indica 32.73 2.00e-45 176.00
IUUC-Olo-080857 Oryza longistaminata 38.54 2.00e-67 249.00
IUUC-Ome-081568 Oryza meridionalis 38.54 1.00e-66 247.00
IUUC-Oni-082685 Oryza nivara 38.67 1.00e-70 260.00
IUUC-Opu-084049 Oryza punctata 38.67 4.00e-67 248.00
IUUC-Oru-084348 Oryza rufipogon 38.67 1.00e-70 260.00
IUUC-Osa-086076 Oryza sativa 38.67 1.00e-70 260.00
IUUC-Ola-086991 Oryzias latipes 69.27 5.00e-163 567.00
IUUC-Olu-087891 Ostreococcus lucimarinus 36.01 3.00e-65 242.00
IUUC-Oga-088991 Otolemur garnettii 92.60 0.00e+00 758.00
IUUC-Oar-090430 Ovis aries 92.81 0.00e+00 726.00
IUUC-Ptr-091359 Pan troglodytes 95.01 0.00e+00 762.00
IUUC-Pan-092499 Papio anubis 94.33 0.00e+00 758.00
IUUC-Pma-094447 Petromyzon marinus 61.78 4.00e-130 457.00
IUUC-Pno-095008 Phaeosphaeria nodorum 30.20 1.00e-63 237.00
IUUC-Ppa-095680 Physcomitrella patens 40.00 8.00e-79 287.00
IUUC-Pfo-096430 Poecilia formosa 68.84 2.00e-164 572.00
IUUC-Pab-097649 Pongo abelii 94.78 0.00e+00 759.00
IUUC-Pop-100055 Populus trichocarpa 39.79 1.00e-77 284.00
IUUC-Pca-100317 Procavia capensis 73.84 2.00e-129 455.00
IUUC-Ppe-101999 Prunus persica 38.16 1.00e-80 293.00
IUUC-Pva-103046 Pteropus vampyrus 92.54 0.00e+00 740.00
IUUC-Pgr-103655 Puccinia graminis 29.51 1.00e-52 201.00
IUUC-Ptt-103812 Puccinia triticina 31.54 8.00e-47 181.00
IUUC-Pte-104243 Pyrenophora teres 29.92 2.00e-57 216.00
IUUC-Pyt-104512 Pyrenophora triticirepentis 30.10 4.00e-60 226.00
IUUC-Rno-104973 Rattus norvegicus 97.68 0.00e+00 792.00
IUUC-Sce-106329 Saccharomyces cerevisiae 25.45 2.00e-49 190.00
IUUC-Sha-106941 Sarcophilus harrisii 83.33 0.00e+00 664.00
IUUC-Sja-107821 Schizosaccharomyces japonicus 32.74 7.00e-64 238.00
IUUC-Spo-108329 Schizosaccharomyces pombe 36.34 9.00e-74 271.00
IUUC-Ssl-108552 Sclerotinia sclerotiorum 28.88 1.00e-59 224.00
IUUC-Smo-109198 Selaginella moellendorffii 38.69 3.00e-65 242.00
IUUC-Sit-109694 Setaria italica 37.68 4.00e-74 272.00
IUUC-Sly-111294 Solanum lycopersicum 38.64 3.00e-80 292.00
IUUC-Stu-112747 Solanum tuberosum 39.14 2.00e-81 296.00
IUUC-Sar-113315 Sorex araneus 72.65 2.00e-75 276.00
IUUC-Sbi-114694 Sorghum bicolor 36.88 9.00e-73 267.00
IUUC-Sre-114937 Sporisorium reilianum 28.70 7.00e-63 235.00
IUUC-Ssc-116127 Sus scrofa 94.00 0.00e+00 736.00
IUUC-Tgu-117242 Taeniopygia guttata 69.84 6.00e-107 380.00
IUUC-Tru-118285 Takifugu rubripes 62.87 2.00e-169 588.00
IUUC-Tni-120368 Tetraodon nigroviridis 62.24 7.00e-162 563.00
IUUC-Tca-121724 Theobroma cacao 37.37 2.00e-73 269.00
IUUC-Tre-122106 Trichoderma reesei 32.41 9.00e-66 244.00
IUUC-Tvi-122526 Trichoderma virens 32.01 4.00e-66 245.00
IUUC-Tae-122939 Triticum aestivum 37.70 8.00e-69 254.00
IUUC-Tur-126548 Triticum urartu 37.70 1.00e-68 254.00
IUUC-Tme-126985 Tuber melanosporum 34.63 4.00e-64 239.00
IUUC-Tbe-127923 Tupaia belangeri 94.47 0.00e+00 724.00
IUUC-Ttr-129308 Tursiops truncatus 88.38 0.00e+00 670.00
IUUC-Uma-129472 Ustilago maydis 30.41 1.00e-58 220.00
IUUC-Vda-129910 Verticillium dahliae 31.36 3.00e-64 239.00
IUUC-Vvi-131683 Vitis vinifera 39.68 3.00e-87 315.00
IUUC-Xtr-132118 Xenopus tropicalis 67.68 8.00e-159 553.00
IUUC-Xma-133804 Xiphophorus maculatus 68.34 1.00e-162 565.00
IUUC-Yli-134639 Yarrowia lipolytica 32.07 3.00e-60 226.00
IUUC-Zma-135884 Zea mays 37.53 2.00e-73 270.00
Created Date 25-Jun-2017

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