iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074637

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02059984

Gene Name

UBR4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000000264.3	ENSOCUT00000000268.3	ENSOCUP00000000234.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/N-recognin/UBR-box	97.74	0.00e+00	9623.00	IUUC-Hsa-046955

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MATSGGDEAA AAAPAPGAPA AGADATPGWE VAVRPLLSAS YSAFEMKELP QLVASVIESE 60
SEILHHEKQY EPFYSSFVAL STHYITTVCS LIPRNQLQSV AAACKVLIEF SLLRLENPDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGACGA GCGGCGGCGA TGAGGCGGCG GCAGCGGCGC CGGCGCCGGG GGCCCCGGCA 60
GCGGGGGCGG ACGCGACCCC GGGCTGGGAG GTGGCGGTGC GGCCCCTGCT GTCCGCGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016024--ARM-type_fold
IPR025704--E3_Ub_ligase_UBR4
IPR017986--WD40_repeat_dom
IPR003126--Znf_UBR

PROSITE

PS51157--ZF_UBR

Pfam

PF13764--E3_UbLigase_R4
PF02207--zf-UBR

SMART

SM00396--ZnF_UBR1

Gene Ontology

GO:0005813--C:centrosome
GO:0005829--C:cytosol
GO:0016020--C:membrane
GO:0005654--C:nucleoplasm
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000915	Aegilops tauschii	32.95	0.00e+00	963.00
IUUC-Aml-001346	Ailuropoda melanoleuca	97.16	0.00e+00	9603.00
IUUC-Atr-002587	Amborella trichopoda	34.91	6.00e-147	517.00
IUUC-Apl-003678	Anas platyrhynchos	91.53	0.00e+00	5681.00
IUUC-Aca-004517	Anolis carolinensis	91.35	0.00e+00	935.00
IUUC-Aly-006117	Arabidopsis lyrata	32.36	0.00e+00	894.00
IUUC-Ath-007289	Arabidopsis thaliana	32.36	0.00e+00	891.00
IUUC-Ame-011965	Astyanax mexicanus	82.72	0.00e+00	4735.00
IUUC-Bta-012498	Bos taurus	96.26	0.00e+00	9476.00
IUUC-Bdi-014555	Brachypodium distachyon	33.23	0.00e+00	965.00
IUUC-Bol-015522	Brassica oleracea	32.29	0.00e+00	905.00
IUUC-Bra-017090	Brassica rapa	32.34	0.00e+00	838.00
IUUC-Cel-018504	Caenorhabditis elegans	25.60	2.00e-159	558.00
IUUC-Cja-018983	Callithrix jacchus	97.68	0.00e+00	9618.00
IUUC-Cfa-020612	Canis familiaris	97.24	0.00e+00	9634.00
IUUC-Cpo-021700	Cavia porcellus	97.25	0.00e+00	9618.00
IUUC-Csa-023771	Chlorocebus sabaeus	97.83	0.00e+00	9592.00
IUUC-Cho-024474	Choloepus hoffmanni	90.65	0.00e+00	4808.00
IUUC-Cin-025247	Ciona intestinalis	56.38	0.00e+00	1023.00
IUUC-Csv-026255	Ciona savignyi	57.42	0.00e+00	1055.00
IUUC-Dre-028796	Danio rerio	84.68	0.00e+00	5108.00
IUUC-Dno-030056	Dasypus novemcinctus	96.89	0.00e+00	9591.00
IUUC-Dor-030711	Dipodomys ordii	93.84	0.00e+00	6873.00
IUUC-Dme-032113	Drosophila melanogaster	41.57	0.00e+00	917.00
IUUC-Ete-032334	Echinops telfairi	93.68	0.00e+00	4032.00
IUUC-Eca-033327	Equus caballus	97.45	0.00e+00	9667.00
IUUC-Eeu-034698	Erinaceus europaeus	86.04	0.00e+00	1220.00
IUUC-Fca-035430	Felis catus	96.50	0.00e+00	9485.00
IUUC-Fal-037566	Ficedula albicollis	90.92	0.00e+00	5626.00
IUUC-Gmo-038674	Gadus morhua	83.39	0.00e+00	8041.00
IUUC-Ggr-039732	Gaeumannomyces graminis	42.86	2.50e-01	30.00
IUUC-Gga-040641	Gallus gallus	92.19	0.00e+00	9242.00
IUUC-Gac-041870	Gasterosteus aculeatus	83.79	0.00e+00	8315.00
IUUC-Gma-042722	Glycine max	31.13	0.00e+00	931.00
IUUC-Ggo-045360	Gorilla gorilla	97.86	0.00e+00	9642.00
IUUC-Hsa-046955	Homo sapiens	97.74	0.00e+00	9622.00
IUUC-Hvu-047255	Hordeum vulgare	32.80	0.00e+00	959.00
IUUC-Itr-048714	Ictidomys tridecemlineatus	95.56	0.00e+00	3922.00
IUUC-Lch-049893	Latimeria chalumnae	81.00	0.00e+00	4993.00
IUUC-Lpe-050948	Leersia perrieri	32.51	0.00e+00	888.00
IUUC-Loc-052019	Lepisosteus oculatus	83.56	0.00e+00	8160.00
IUUC-Laf-054238	Loxodonta africana	96.56	0.00e+00	9519.00
IUUC-Mcc-054905	Macaca mulatta	97.82	0.00e+00	9628.00
IUUC-Meu-056297	Macropus eugenii	86.88	0.00e+00	8450.00
IUUC-Mtr-058169	Medicago truncatula	31.97	0.00e+00	926.00
IUUC-Mga-059621	Meleagris gallopavo	91.53	0.00e+00	9205.00
IUUC-Mmr-061395	Microcebus murinus	99.26	0.00e+00	3000.00
IUUC-Mdo-063037	Monodelphis domestica	91.76	0.00e+00	4616.00
IUUC-Mmu-063200	Mus musculus	96.31	0.00e+00	9452.00
IUUC-Mac-065267	Musa acuminata	31.05	0.00e+00	877.00
IUUC-Mpu-066639	Mustela putorius furo	97.27	0.00e+00	9613.00
IUUC-Mlu-067172	Myotis lucifugus	97.03	0.00e+00	9621.00
IUUC-Ncr-068935	Neurospora crassa	31.11	3.60e-01	30.00
IUUC-Nle-069162	Nomascus leucogenys	97.50	0.00e+00	8381.00
IUUC-Opr-070567	Ochotona princeps	94.57	0.00e+00	3525.00
IUUC-Ont-072364	Oreochromis niloticus	82.46	0.00e+00	4991.00
IUUC-Oan-072804	Ornithorhynchus anatinus	83.51	0.00e+00	2011.00
IUUC-Oba-075215	Oryza barthii	33.83	0.00e+00	825.00
IUUC-Obr-076704	Oryza brachyantha	33.03	0.00e+00	936.00
IUUC-Ogl-077593	Oryza glaberrima	35.56	0.00e+00	649.00
IUUC-Ogu-078732	Oryza glumaepatula	32.65	0.00e+00	890.00
IUUC-Oin-079805	Oryza indica	32.60	0.00e+00	733.00
IUUC-Olo-080261	Oryza longistaminata	33.87	0.00e+00	828.00
IUUC-Ome-081392	Oryza meridionalis	33.78	0.00e+00	866.00
IUUC-Oni-082086	Oryza nivara	33.87	0.00e+00	829.00
IUUC-Opu-083535	Oryza punctata	33.94	0.00e+00	833.00
IUUC-Oru-084735	Oryza rufipogon	33.87	0.00e+00	828.00
IUUC-Ola-086799	Oryzias latipes	83.53	0.00e+00	8205.00
IUUC-Olu-087777	Ostreococcus lucimarinus	27.81	7.00e-86	313.00
IUUC-Oga-088126	Otolemur garnettii	92.36	0.00e+00	1532.00
IUUC-Oar-090428	Ovis aries	94.99	0.00e+00	9287.00
IUUC-Ptr-091407	Pan troglodytes	97.80	0.00e+00	9631.00
IUUC-Pan-091777	Papio anubis	97.34	0.00e+00	9614.00
IUUC-Psi-093587	Pelodiscus sinensis	91.58	0.00e+00	9249.00
IUUC-Ppa-095781	Physcomitrella patens	33.17	0.00e+00	974.00
IUUC-Pfo-097449	Poecilia formosa	83.75	0.00e+00	8319.00
IUUC-Pab-098450	Pongo abelii	96.48	0.00e+00	9483.00
IUUC-Pop-100041	Populus trichocarpa	32.96	0.00e+00	891.00
IUUC-Pca-100663	Procavia capensis	88.97	0.00e+00	2846.00
IUUC-Ppe-101386	Prunus persica	32.29	0.00e+00	822.00
IUUC-Pva-102701	Pteropus vampyrus	97.67	0.00e+00	4081.00
IUUC-Rno-105367	Rattus norvegicus	95.96	0.00e+00	5826.00
IUUC-Sha-107490	Sarcophilus harrisii	92.42	0.00e+00	5700.00
IUUC-Smo-109103	Selaginella moellendorffii	33.40	0.00e+00	900.00
IUUC-Sit-110670	Setaria italica	34.12	0.00e+00	889.00
IUUC-Sly-110952	Solanum lycopersicum	32.20	0.00e+00	890.00
IUUC-Stu-112624	Solanum tuberosum	31.73	2.00e-155	543.00
IUUC-Sar-113180	Sorex araneus	90.93	0.00e+00	4274.00
IUUC-Sbi-114596	Sorghum bicolor	33.04	0.00e+00	928.00
IUUC-Ssc-115377	Sus scrofa	99.26	0.00e+00	2999.00
IUUC-Tgu-117330	Taeniopygia guttata	89.97	0.00e+00	5606.00
IUUC-Tru-117635	Takifugu rubripes	83.05	0.00e+00	8249.00
IUUC-Tsy-119551	Tarsius syrichta	89.19	0.00e+00	4568.00
IUUC-Tni-119727	Tetraodon nigroviridis	82.78	0.00e+00	8233.00
IUUC-Tca-121017	Theobroma cacao	32.96	0.00e+00	935.00
IUUC-Tae-122892	Triticum aestivum	35.37	2.00e-25	109.00
IUUC-Tur-126292	Triticum urartu	33.00	0.00e+00	961.00
IUUC-Ttr-128332	Tursiops truncatus	95.81	0.00e+00	8463.00
IUUC-Vpa-130615	Vicugna pacos	95.66	0.00e+00	2629.00
IUUC-Vvi-131435	Vitis vinifera	34.14	0.00e+00	822.00
IUUC-Xtr-132130	Xenopus tropicalis	90.11	0.00e+00	2107.00
IUUC-Xma-133859	Xiphophorus maculatus	82.31	0.00e+00	5058.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence