iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Nle-069256

Ensembl Protein ID

ENSNLEP00000021988.1

UniProt Accession

G1S8Z9; G1S8Z9_NOMLE

Genbank Protein ID

ENSNLEP00000021988

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01023389

Gene Name

KDM5B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000018101.2	ENSNLET00000023102.1	ENSNLEP00000021988.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	9.90e-22	76.9	329	375

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vCl+Cg+g +++  l+ C+ C++ +H  Cl ++   ++p+ + w CpkC 
   Q: 329  VCLLCGSGNDED-RLLLCDGCDDSYHTFCLIPP-LHDVPKGD-WRCPKCL 375
           8********988.6*******************.*******7.******5 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

GPGPLGEFLP PPECPVFEPS WEEFTDPICT SHHARPVPIQ IMMCPPRPPK DWQPPFACDV 60
DKLHFTPRIQ RLNELEAQTR VKLNFLDQIA KYWELQGSTL KIPHVERKIL DLFQLNKLVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCCCGGGCC CGCTGGGCGA GTTCCTGCCT CCCCCCGAAT GCCCGGTCTT CGAGCCCAGC 60
TGGGAAGAGT TCGCGGACCC CTTCGCTTTC ATCCACAAGA TCCGGCCCAT AGCCGAGNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0034648--F:histone demethylase activity (H3-dimethyl-K4 specific)
GO:0034647--F:histone demethylase activity (H3-trimethyl-K4 specific)
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0003714--F:transcription corepressor activity
GO:0008270--F:zinc ion binding
GO:0045892--P:negative regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000552	Aegilops tauschii	34.25	2.00e-101	364.00
IUUC-Aml-001963	Ailuropoda melanoleuca	94.32	0.00e+00	2782.00
IUUC-Apl-003770	Anas platyrhynchos	83.63	0.00e+00	2159.00
IUUC-Aca-004867	Anolis carolinensis	79.15	0.00e+00	2456.00
IUUC-Ath-007218	Arabidopsis thaliana	35.56	4.00e-09	58.50
IUUC-Acl-008162	Aspergillus clavatus	31.34	4.00e-114	406.00
IUUC-Ani-009139	Aspergillus nidulans	30.69	2.00e-108	387.00
IUUC-Ame-010620	Astyanax mexicanus	60.65	0.00e+00	1875.00
IUUC-Bta-012733	Bos taurus	89.34	0.00e+00	2650.00
IUUC-Bol-015336	Brassica oleracea	36.45	2.00e-14	75.90
IUUC-Cja-019050	Callithrix jacchus	95.15	0.00e+00	2892.00
IUUC-Cfa-021015	Canis familiaris	94.38	0.00e+00	2774.00
IUUC-Cpo-022340	Cavia porcellus	94.25	0.00e+00	2734.00
IUUC-Csa-023441	Chlorocebus sabaeus	95.87	0.00e+00	2867.00
IUUC-Cho-024823	Choloepus hoffmanni	92.17	0.00e+00	1664.00
IUUC-Cgl-026613	Colletotrichum gloeosporioides	29.79	3.00e-107	384.00
IUUC-Cne-026851	Cryptococcus neoformans	28.86	3.00e-113	404.00
IUUC-Dre-027707	Danio rerio	59.28	0.00e+00	1793.00
IUUC-Dno-028978	Dasypus novemcinctus	93.28	0.00e+00	2807.00
IUUC-Dor-030854	Dipodomys ordii	86.84	0.00e+00	1929.00
IUUC-Ete-032760	Echinops telfairi	91.10	0.00e+00	1853.00
IUUC-Eca-034370	Equus caballus	94.58	0.00e+00	2710.00
IUUC-Eeu-035012	Erinaceus europaeus	81.30	0.00e+00	1750.00
IUUC-Fca-035494	Felis catus	95.11	0.00e+00	2776.00
IUUC-Fal-037631	Ficedula albicollis	81.21	0.00e+00	2398.00
IUUC-Gmo-039522	Gadus morhua	56.99	0.00e+00	1683.00
IUUC-Gga-040802	Gallus gallus	80.88	0.00e+00	2410.00
IUUC-Gac-041563	Gasterosteus aculeatus	60.25	0.00e+00	1817.00
IUUC-Gma-042675	Glycine max	32.30	4.00e-100	360.00
IUUC-Ggo-044856	Gorilla gorilla	79.03	0.00e+00	2198.00
IUUC-Hsa-045888	Homo sapiens	98.39	0.00e+00	2956.00
IUUC-Hvu-047583	Hordeum vulgare	43.04	1.00e-15	79.00
IUUC-Itr-048297	Ictidomys tridecemlineatus	94.06	0.00e+00	2802.00
IUUC-Lch-050483	Latimeria chalumnae	64.12	0.00e+00	1990.00
IUUC-Lpe-051537	Leersia perrieri	31.88	1.00e-90	328.00
IUUC-Loc-052550	Lepisosteus oculatus	68.58	0.00e+00	2073.00
IUUC-Laf-053761	Loxodonta africana	92.46	0.00e+00	2711.00
IUUC-Mcc-055505	Macaca mulatta	98.13	0.00e+00	2941.00
IUUC-Mpo-057317	Magnaporthe poae	28.65	5.00e-105	376.00
IUUC-Mga-059358	Meleagris gallopavo	80.86	0.00e+00	2415.00
IUUC-Mmr-060863	Microcebus murinus	94.20	0.00e+00	2830.00
IUUC-Mdo-061957	Monodelphis domestica	86.72	0.00e+00	2659.00
IUUC-Mmu-063944	Mus musculus	90.13	0.00e+00	2724.00
IUUC-Mac-065069	Musa acuminata	36.04	2.00e-08	55.80
IUUC-Mpu-066719	Mustela putorius furo	91.93	0.00e+00	2801.00
IUUC-Mlu-068086	Myotis lucifugus	85.80	0.00e+00	2540.00
IUUC-Nfi-068430	Neosartorya fischeri	28.85	7.00e-141	495.00
IUUC-Ont-071756	Oreochromis niloticus	60.37	0.00e+00	1851.00
IUUC-Oan-073568	Ornithorhynchus anatinus	87.13	0.00e+00	2661.00
IUUC-Ocu-073961	Oryctolagus cuniculus	89.98	0.00e+00	2724.00
IUUC-Ogl-077886	Oryza glaberrima	38.83	1.00e-16	82.40
IUUC-Olo-080668	Oryza longistaminata	38.83	4.00e-16	81.60
IUUC-Osa-085487	Oryza sativa	38.83	1.00e-16	82.40
IUUC-Ola-086448	Oryzias latipes	61.76	0.00e+00	1844.00
IUUC-Oga-088501	Otolemur garnettii	90.56	0.00e+00	2394.00
IUUC-Oar-090162	Ovis aries	88.93	0.00e+00	2638.00
IUUC-Ptr-090816	Pan troglodytes	98.65	0.00e+00	2988.00
IUUC-Pan-092764	Papio anubis	96.00	0.00e+00	2869.00
IUUC-Psi-093918	Pelodiscus sinensis	80.97	0.00e+00	2224.00
IUUC-Pfo-096672	Poecilia formosa	60.22	0.00e+00	1780.00
IUUC-Pab-097854	Pongo abelii	91.85	0.00e+00	2182.00
IUUC-Pca-100241	Procavia capensis	91.95	0.00e+00	1810.00
IUUC-Pva-103035	Pteropus vampyrus	83.09	0.00e+00	2197.00
IUUC-Rno-105574	Rattus norvegicus	88.77	0.00e+00	2662.00
IUUC-Sce-106207	Saccharomyces cerevisiae	35.59	5.00e-74	272.00
IUUC-Ssl-108489	Sclerotinia sclerotiorum	28.77	1.00e-131	464.00
IUUC-Sar-113477	Sorex araneus	88.78	0.00e+00	2414.00
IUUC-Ssc-116132	Sus scrofa	91.28	0.00e+00	2391.00
IUUC-Tgu-117452	Taeniopygia guttata	81.84	0.00e+00	2403.00
IUUC-Tru-117561	Takifugu rubripes	63.07	0.00e+00	1718.00
IUUC-Tsy-119271	Tarsius syrichta	95.70	0.00e+00	2193.00
IUUC-Tni-119650	Tetraodon nigroviridis	59.26	0.00e+00	1784.00
IUUC-Tur-126632	Triticum urartu	34.38	5.00e-101	363.00
IUUC-Tme-127087	Tuber melanosporum	30.23	7.00e-137	482.00
IUUC-Tbe-127890	Tupaia belangeri	91.47	0.00e+00	1563.00
IUUC-Ttr-128546	Tursiops truncatus	86.53	0.00e+00	1970.00
IUUC-Vda-129733	Verticillium dahliae	27.93	7.00e-126	445.00
IUUC-Vpa-130432	Vicugna pacos	90.08	0.00e+00	1584.00
IUUC-Xtr-132008	Xenopus tropicalis	68.77	0.00e+00	2085.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence