iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Osa-085679

UUCD1 version

UUC-OrS-00640

Ensembl Protein ID

OS11T0629300-01

UniProt Accession

Q2R0W9; Q2R0W9_ORYSJ

Genbank Protein ID

ABA94941.1; ABA94942.1; BAF28676.1; BAH00035.1; BAT14931.1

Protein Name

Os11g0629300 protein; Zinc finger, C3HC4 type family protein, expressed; cDNA clone:J013113A03, full insert sequence

Genbank Nucleotide ID

DP000010; DP000010; AP008217; AK120485; AP014967

Gene Name

Os11g0629300; LOC_Os11g41140; Os11g0629300; OSNPB_110629300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OS11G0629300	OS11T0629300-01	OS11T0629300-01

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	23571674

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	3.80e-08	34.6	170	210

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++Cled+  +++ +v++C H+fh+ C++ w        ++  CP+C
   Q: 170  CPTCLEDYtsENPRIVMQCSHHFHLGCIYEW------MERSEACPVC 210
           ********8766444699*************......999999**** PP

Organism

Oryza sativa

Protein Sequence
(Fasta)

MGALCSCLQA DYSDHHGHHA SPALGGCMCL RCFTQQLINA YTVLFRAGTV HAVSQSIEAT 60
PVDSSESSFD TYRSPPRPLP YDDPRFSPPQ RDWLVSRHGP SCHSPEESEP LRANDDEEME 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGAGAGAG AGAGAAGAAG CTCAACCCAA TCCCCTCCTC TCCCCCAATT CCGCCGCCGC 60
CCCCTGCTCG GATCCTCCCC CACCCCCGCC GCCGGCGAGA AGGGCCCGTA GGCGCGGGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

osa:4350962

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000479	Aegilops tauschii	86.67	8.00e-84	301.00
IUUC-Aly-005799	Arabidopsis lyrata	44.73	2.00e-43	167.00
IUUC-Bci-013799	Botrytis cinerea	39.53	5.00e-07	47.80
IUUC-Bdi-014798	Brachypodium distachyon	85.97	2.00e-104	370.00
IUUC-Bol-016572	Brassica oleracea	45.65	1.00e-47	181.00
IUUC-Bra-018045	Brassica rapa	42.47	3.00e-42	163.00
IUUC-Cme-027114	Cyanidioschyzon merolae	44.09	1.00e-17	82.80
IUUC-Hvu-047810	Hordeum vulgare	80.56	3.00e-103	366.00
IUUC-Lpe-051120	Leersia perrieri	95.88	4.00e-107	381.00
IUUC-Mac-064735	Musa acuminata	50.66	4.00e-56	209.00
IUUC-Oba-075895	Oryza barthii	99.09	2.00e-124	436.00
IUUC-Obr-076815	Oryza brachyantha	93.64	4.00e-123	432.00
IUUC-Ogl-077082	Oryza glaberrima	99.09	2.00e-124	436.00
IUUC-Ogu-078357	Oryza glumaepatula	98.45	4.00e-105	372.00
IUUC-Oin-079063	Oryza indica	100.00	3.00e-43	164.00
IUUC-Olo-080533	Oryza longistaminata	97.71	2.00e-96	345.00
IUUC-Ome-081401	Oryza meridionalis	100.00	3.00e-105	373.00
IUUC-Oni-082343	Oryza nivara	98.15	2.00e-126	444.00
IUUC-Opu-083596	Oryza punctata	96.30	8.00e-107	378.00
IUUC-Oru-084659	Oryza rufipogon	91.29	1.00e-127	447.00
IUUC-Sit-110241	Setaria italica	82.35	2.00e-100	357.00
IUUC-Sbi-114816	Sorghum bicolor	81.00	7.00e-95	338.00
IUUC-Tca-121439	Theobroma cacao	51.54	7.00e-52	195.00
IUUC-Tae-123613	Triticum aestivum	85.91	4.00e-105	372.00
IUUC-Tur-126608	Triticum urartu	82.22	1.00e-53	202.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence