iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098883

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

SPX domain-containing family protein

Genbank Nucleotide ID

CM000350

Gene Name

POPTRDRAFT_572701; POPTR_0014s12480g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s12480	POPTR_0014s12480.1	POPTR_0014s12480.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-06	29.0	216	265

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkw....pglknssskefrCPlCr 46
           C+iCl+  +d p++l CgH+f+  C   +     ++  + + ++ +CPlCr
   Q: 216  CSICLDTVFD-PVSLTCGHIFCYMCAcSAAsvtiVDGLKAAEPKEKCPLCR 265
           **********.9*************752225577777778999999****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKFCKKYQEY MQGQQKQLPG VDFKKLKKIL KKCRKDFESH QDHDGQSCPH HCPVCDGTFF 60
PSLVKEMSAV VGCFNKRAQK LLELHLASGF RKYFMWFQGR LQKDHAALIQ EGKDLVTYAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCTTTCTG TCATCTCCTC AGGTTTGGTC TAGATACACG TCTCTCAGCA CTCCAAGCCG 60
TTGATATGCA GACAGAGAAA GTAACGTCCT CTCCTTCCAT TAGATAAAGA ACTAAGTCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR033326--BAH1
IPR004331--SPX_dom
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51382--SPX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567--P:protein ubiquitination

KEGG

pop:POPTR_0014s12480g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000402	Aegilops tauschii	64.33	8.00e-118	416.00
IUUC-Atr-002937	Amborella trichopoda	69.26	1.00e-102	365.00
IUUC-Aly-006134	Arabidopsis lyrata	68.26	3.00e-127	447.00
IUUC-Ath-007603	Arabidopsis thaliana	68.36	3.00e-127	447.00
IUUC-Bdi-014332	Brachypodium distachyon	65.37	6.00e-119	419.00
IUUC-Bol-016417	Brassica oleracea	67.27	5.00e-124	436.00
IUUC-Bra-017786	Brassica rapa	67.27	7.00e-124	436.00
IUUC-Gma-043751	Glycine max	79.63	8.00e-152	528.00
IUUC-Ggo-044614	Gorilla gorilla	43.86	2.00e-08	53.10
IUUC-Hvu-047712	Hordeum vulgare	66.16	3.00e-118	417.00
IUUC-Lpe-050909	Leersia perrieri	67.38	5.00e-120	423.00
IUUC-Mtr-057944	Medicago truncatula	79.44	2.00e-147	514.00
IUUC-Mac-064602	Musa acuminata	72.84	6.00e-133	466.00
IUUC-Oan-073272	Ornithorhynchus anatinus	47.46	2.00e-09	57.40
IUUC-Oba-075836	Oryza barthii	65.33	1.00e-113	402.00
IUUC-Obr-076486	Oryza brachyantha	69.35	3.00e-125	440.00
IUUC-Ogl-077626	Oryza glaberrima	70.59	5.00e-128	449.00
IUUC-Ogu-078145	Oryza glumaepatula	65.11	5.00e-112	396.00
IUUC-Oin-079757	Oryza indica	70.59	5.00e-128	449.00
IUUC-Olo-080266	Oryza longistaminata	64.71	1.00e-111	395.00
IUUC-Ome-082016	Oryza meridionalis	65.02	8.00e-111	392.00
IUUC-Oni-082394	Oryza nivara	65.11	5.00e-112	396.00
IUUC-Oru-085105	Oryza rufipogon	65.02	2.00e-113	401.00
IUUC-Osa-085877	Oryza sativa	70.28	9.00e-128	449.00
IUUC-Ppa-095647	Physcomitrella patens	46.52	2.00e-72	265.00
IUUC-Ppe-102102	Prunus persica	83.12	7.00e-157	545.00
IUUC-Sha-107080	Sarcophilus harrisii	41.38	2.00e-08	53.90
IUUC-Smo-108884	Selaginella moellendorffii	48.67	4.00e-90	324.00
IUUC-Sly-111455	Solanum lycopersicum	73.35	8.00e-132	462.00
IUUC-Stu-112682	Solanum tuberosum	73.27	2.00e-133	467.00
IUUC-Sbi-114377	Sorghum bicolor	66.77	9.00e-121	426.00
IUUC-Tca-121488	Theobroma cacao	83.95	6.00e-161	559.00
IUUC-Tae-124688	Triticum aestivum	64.33	8.00e-118	416.00
IUUC-Tur-126565	Triticum urartu	55.22	7.00e-89	319.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence