iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016841

Ensembl Protein ID

Bra017278.1-P

UniProt Accession

M4DL97; M4DL97_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra017278	Bra017278.1	Bra017278.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.90e-35	119.5	6	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceens 73
           e+p++flCpIsle+M+dPv++++Gitydr sIekwl sg+k +cPvt+q +t+ dl+Pn+tlrrliq+wc  n+
   Q: 6    EIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFSGKKnSCPVTKQDITDADLTPNHTLRRLIQSWCTLNA 79
           69**********************************999999****************************9876 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDEEIEIPPF FLCPISLEIM KDPVIVSTGI TYDRDSIEKW LFSGKKNSCP VTKQDITDAD 60
LTPNHTLRRL IQSWCTLNAS YGVERFPTPR PPICKSEIEK LIKDSASSHQ NQVKCLKRLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGAAG AGATCGAGAT TCCTCCTTTC TTTCTTTGCC CAATCTCTCT AGAGATCATG 60
AAAGATCCGG TGATAGTCTC TACGGGAATA ACCTACGATA GAGACAGCAT CGAGAAATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000639	Aegilops tauschii	46.01	2.00e-88	318.00
IUUC-Atr-002430	Amborella trichopoda	45.59	2.00e-104	372.00
IUUC-Aly-006194	Arabidopsis lyrata	90.05	0.00e+00	710.00
IUUC-Ath-007471	Arabidopsis thaliana	90.51	0.00e+00	716.00
IUUC-Bdi-014627	Brachypodium distachyon	44.47	2.00e-90	325.00
IUUC-Bol-015755	Brassica oleracea	97.57	0.00e+00	802.00
IUUC-Hvu-047293	Hordeum vulgare	46.96	1.00e-90	326.00
IUUC-Lpe-051695	Leersia perrieri	41.45	8.00e-71	260.00
IUUC-Mac-065005	Musa acuminata	46.59	4.00e-99	354.00
IUUC-Oba-075095	Oryza barthii	43.55	7.00e-79	287.00
IUUC-Obr-076623	Oryza brachyantha	40.08	2.00e-49	188.00
IUUC-Ogl-077664	Oryza glaberrima	44.74	1.00e-80	293.00
IUUC-Ogu-079030	Oryza glumaepatula	43.05	7.00e-75	274.00
IUUC-Oin-079734	Oryza indica	43.05	9.00e-75	273.00
IUUC-Ome-081360	Oryza meridionalis	42.28	3.00e-71	262.00
IUUC-Oni-082818	Oryza nivara	42.82	2.00e-76	279.00
IUUC-Opu-083355	Oryza punctata	45.21	5.00e-81	294.00
IUUC-Oru-085239	Oryza rufipogon	43.05	8.00e-75	273.00
IUUC-Osa-086041	Oryza sativa	43.05	7.00e-75	274.00
IUUC-Ppe-102059	Prunus persica	58.21	3.00e-147	514.00
IUUC-Sit-110734	Setaria italica	42.96	3.00e-86	311.00
IUUC-Sly-111579	Solanum lycopersicum	56.55	4.00e-127	447.00
IUUC-Stu-112276	Solanum tuberosum	57.66	1.00e-143	502.00
IUUC-Sbi-114657	Sorghum bicolor	47.17	4.00e-89	321.00
IUUC-Tca-121107	Theobroma cacao	62.74	2.00e-155	541.00
IUUC-Tae-124810	Triticum aestivum	45.86	2.00e-98	352.00
IUUC-Vvi-131052	Vitis vinifera	59.62	3.00e-142	498.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence