iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pma-094319

UUCD1 version

UUC-PeM-00252

Ensembl Protein ID

ENSPMAP00000008477.1

UniProt Accession

S4RTD7; S4RTD7_PETMA

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPMAG00000007707.1	ENSPMAT00000008515.1	ENSPMAP00000008477.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.00e-62	201.6	87	126
UBD/Beta-Prp	2.00e-91	305.5	46	349

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           gHtdsv +++f  s+++l+s+s D t+k+WD+ ++ +l++
   Q: 87   GHTDSVQDISFdlSGKMLASCSADMTVKLWDFQSFECLRT 126
           8***********877********************99985 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsv 97
           h s++t v f+p  s+++++s+d+tikvwd++tg++ r+l+gh++ v++++f+ +gk+l+++s D+t+k+wd+++++c++t++gh+++v
   Q: 46   HRSPVTRVIFHPVFSVIVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDLSGKMLASCSADMTVKLWDFQSFECLRTMHGHDHNV 134
           5668888********************************************************************************** PP
   S: 98   lslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysl 186
            s++f+p+gd+lvs+s+d+t ++w+++tg+c++ t++gh+++v++v+ ++dg+l++s+s+D+tvr+W  +t+++  +l++ h++ v+++
   Q: 135  SSVAFMPNGDHLVSASRDKTMKMWEVQTGYCVK-TFTGHREWVRMVRPNQDGSLIASCSNDQTVRVWVTATKECKAELRE-HEHVVECV 221
           *********************************.*********************************************9.******** PP
   S: 187  sfdsng....................kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgd 255
           s+ ++                     ++l+sgs+d+t+k+wd++tg cv tl gh+++v+ v f+p +++++s+++D+++r+Wd++++ 
   Q: 222  SWAPDAaspvileatgaeakkggkpgPYLLSGSRDKTIKMWDISTGICVITLVGHDNWVRGVLFHPGGKFILSCADDKTLRVWDYKNKR 310
           ****9999********************************************************************************* PP
   S: 256  llktlqlhnssvisvavlsfgdnvlvlgsedskvniwklk 295
           + k+l+ h++ v+s ++ + + +++++gs d++v++w+++
   Q: 311  CQKSLAAHEHFVTSLDF-HKTAPYVITGSVDQSVKVWECR 349
           *****************.99*****************985 PP

Organism

Petromyzon marinus

Protein Sequence
(Fasta)

QVMELESKLN EAKEEFVSGG GPLGGQRRDP SEWIPRPPEK YALSGHRSPV TRVIFHPVFS 60
VIVSASEDAT IKVWDYETGD FERTLKGHTD SVQDISFDLS GKMLASCSAD MTVKLWDFQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGTGATGG AGCTGGAGTC GAAGTTGAAC GAGGCGAAGG AGGAGTTTGT GTCGGGCGGG 60
GGGCCCCTCG GGGGCCAGCG ACGCGACCCC AGCGAGTGGA TCCCGCGCCC GCCAGAAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0131--Cell cycle
KW-0132--Cell division
KW-0175--Coiled coil
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0493--Microtubule
KW-0498--Mitosis
KW-0677--Repeat
KW-0813--Transport
KW-0853--WD repeat

Interpro

IPR017252--Dynein_regulator_LIS1
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005874--C:microtubule
GO:0051301--P:cell division
GO:0007067--P:mitotic nuclear division
GO:0006810--P:transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000771	Aegilops tauschii	30.39	8.00e-35	139.00
IUUC-Aml-001589	Ailuropoda melanoleuca	88.83	0.00e+00	660.00
IUUC-Atr-002439	Amborella trichopoda	29.39	6.00e-44	169.00
IUUC-Apl-004024	Anas platyrhynchos	88.54	0.00e+00	660.00
IUUC-Aca-004564	Anolis carolinensis	88.54	0.00e+00	654.00
IUUC-Aly-005723	Arabidopsis lyrata	28.75	5.00e-39	152.00
IUUC-Ath-007308	Arabidopsis thaliana	29.07	3.00e-39	153.00
IUUC-Acl-008360	Aspergillus clavatus	46.47	3.00e-87	314.00
IUUC-Afl-008502	Aspergillus flavus	45.07	2.00e-80	291.00
IUUC-Afu-008848	Aspergillus fumigatus	47.25	3.00e-88	317.00
IUUC-Ani-009173	Aspergillus nidulans	42.60	4.00e-77	280.00
IUUC-Ang-009873	Aspergillus niger	42.60	1.00e-74	272.00
IUUC-Aor-009973	Aspergillus oryzae	46.75	6.00e-79	286.00
IUUC-Ate-010523	Aspergillus terreus	41.14	4.00e-74	270.00
IUUC-Ame-010969	Astyanax mexicanus	87.11	0.00e+00	658.00
IUUC-Bgr-011972	Blumeria graminis	47.75	4.00e-88	317.00
IUUC-Bta-013106	Bos taurus	88.83	0.00e+00	660.00
IUUC-Bci-013615	Botrytis cinerea	44.73	2.00e-83	301.00
IUUC-Bol-015900	Brassica oleracea	29.39	2.00e-40	157.00
IUUC-Bra-017143	Brassica rapa	29.39	2.00e-40	157.00
IUUC-Cel-018459	Caenorhabditis elegans	57.43	2.00e-123	434.00
IUUC-Cja-018755	Callithrix jacchus	88.83	0.00e+00	661.00
IUUC-Cfa-020749	Canis familiaris	88.83	0.00e+00	660.00
IUUC-Cpo-022371	Cavia porcellus	88.83	0.00e+00	660.00
IUUC-Cre-022578	Chlamydomonas reinhardtii	36.08	1.00e-51	194.00
IUUC-Csa-023524	Chlorocebus sabaeus	89.05	0.00e+00	653.00
IUUC-Cho-024764	Choloepus hoffmanni	79.37	3.00e-165	572.00
IUUC-Cin-025753	Ciona intestinalis	71.63	2.00e-156	543.00
IUUC-Csv-025817	Ciona savignyi	70.20	5.00e-159	552.00
IUUC-Cgl-026529	Colletotrichum gloeosporioides	48.13	1.00e-83	302.00
IUUC-Cne-027087	Cryptococcus neoformans	52.25	1.00e-102	364.00
IUUC-Cme-027119	Cyanidioschyzon merolae	27.25	5.00e-33	133.00
IUUC-Dre-028314	Danio rerio	86.53	0.00e+00	655.00
IUUC-Dno-029050	Dasypus novemcinctus	89.11	0.00e+00	661.00
IUUC-Dor-030222	Dipodomys ordii	81.09	7.00e-170	588.00
IUUC-Dse-031164	Dothistroma septosporum	43.97	2.00e-84	304.00
IUUC-Dme-031745	Drosophila melanogaster	69.54	4.00e-143	499.00
IUUC-Ete-032508	Echinops telfairi	88.45	5.00e-154	535.00
IUUC-Eca-034288	Equus caballus	89.08	0.00e+00	659.00
IUUC-Eeu-034984	Erinaceus europaeus	80.80	1.00e-168	583.00
IUUC-Fca-036498	Felis catus	88.83	0.00e+00	660.00
IUUC-Fal-036920	Ficedula albicollis	88.54	0.00e+00	660.00
IUUC-Fox-037996	Fusarium oxysporum	46.31	1.00e-87	315.00
IUUC-Fso-038160	Fusarium solani	44.64	2.00e-83	301.00
IUUC-Gmo-038983	Gadus morhua	85.10	0.00e+00	642.00
IUUC-Ggr-040051	Gaeumannomyces graminis	43.85	7.00e-83	299.00
IUUC-Gga-040623	Gallus gallus	88.54	0.00e+00	660.00
IUUC-Gac-041363	Gasterosteus aculeatus	85.67	0.00e+00	649.00
IUUC-Gma-043987	Glycine max	28.84	3.00e-39	154.00
IUUC-Ggo-045410	Gorilla gorilla	80.23	3.00e-169	586.00
IUUC-Hsa-046358	Homo sapiens	88.83	0.00e+00	661.00
IUUC-Hvu-047567	Hordeum vulgare	30.39	3.00e-36	144.00
IUUC-Itr-047890	Ictidomys tridecemlineatus	88.83	0.00e+00	660.00
IUUC-Kpa-049351	Komagataella pastoris	29.50	7.00e-37	146.00
IUUC-Lch-049936	Latimeria chalumnae	87.68	0.00e+00	658.00
IUUC-Lpe-051082	Leersia perrieri	31.96	9.00e-43	165.00
IUUC-Loc-052476	Lepisosteus oculatus	86.53	0.00e+00	650.00
IUUC-Lma-053170	Leptosphaeria maculans	45.35	3.00e-84	303.00
IUUC-Laf-053713	Loxodonta africana	88.54	0.00e+00	659.00
IUUC-Mcc-054628	Macaca mulatta	88.83	0.00e+00	660.00
IUUC-Meu-055927	Macropus eugenii	76.17	1.00e-126	444.00
IUUC-Mor-056962	Magnaporthe oryzae	43.06	9.00e-82	295.00
IUUC-Mpo-057583	Magnaporthe poae	44.13	2.00e-79	288.00
IUUC-Mtr-057951	Medicago truncatula	27.33	5.00e-37	146.00
IUUC-Mla-058819	Melampsora laricipopulina	46.98	7.00e-100	355.00
IUUC-Mga-059945	Meleagris gallopavo	88.25	0.00e+00	658.00
IUUC-Mvi-060403	Microbotryum violaceum	49.09	7.00e-108	382.00
IUUC-Mmr-061289	Microcebus murinus	88.83	0.00e+00	661.00
IUUC-Mdo-061912	Monodelphis domestica	88.25	0.00e+00	655.00
IUUC-Mmu-063253	Mus musculus	88.83	0.00e+00	660.00
IUUC-Mac-065310	Musa acuminata	31.11	3.00e-42	164.00
IUUC-Mpu-066638	Mustela putorius furo	88.83	0.00e+00	660.00
IUUC-Mlu-067267	Myotis lucifugus	88.83	0.00e+00	659.00
IUUC-Nfi-068571	Neosartorya fischeri	48.76	2.00e-86	311.00
IUUC-Ncr-068895	Neurospora crassa	49.56	8.00e-91	325.00
IUUC-Nle-069087	Nomascus leucogenys	87.59	3.00e-147	512.00
IUUC-Opr-070579	Ochotona princeps	89.11	0.00e+00	661.00
IUUC-Ont-071905	Oreochromis niloticus	85.96	0.00e+00	654.00
IUUC-Oan-073072	Ornithorhynchus anatinus	88.83	0.00e+00	660.00
IUUC-Ocu-074180	Oryctolagus cuniculus	89.11	0.00e+00	661.00
IUUC-Oba-075083	Oryza barthii	32.03	2.00e-36	145.00
IUUC-Obr-076405	Oryza brachyantha	30.72	6.00e-35	140.00
IUUC-Ogl-077251	Oryza glaberrima	30.25	2.00e-40	158.00
IUUC-Ogu-078486	Oryza glumaepatula	31.70	4.00e-36	144.00
IUUC-Oin-079679	Oryza indica	32.03	3.00e-37	148.00
IUUC-Olo-080243	Oryza longistaminata	31.37	7.00e-36	143.00
IUUC-Ome-081430	Oryza meridionalis	30.43	9.00e-41	159.00
IUUC-Oni-082961	Oryza nivara	32.03	4.00e-37	147.00
IUUC-Opu-083880	Oryza punctata	30.75	2.00e-41	160.00
IUUC-Oru-084353	Oryza rufipogon	32.03	3.00e-37	147.00
IUUC-Osa-085706	Oryza sativa	30.25	2.00e-40	158.00
IUUC-Ola-086772	Oryzias latipes	86.25	0.00e+00	653.00
IUUC-Oga-088219	Otolemur garnettii	88.83	0.00e+00	662.00
IUUC-Oar-090394	Ovis aries	88.83	0.00e+00	660.00
IUUC-Ptr-091517	Pan troglodytes	88.83	0.00e+00	660.00
IUUC-Pan-092421	Papio anubis	88.83	0.00e+00	660.00
IUUC-Psi-093370	Pelodiscus sinensis	88.83	0.00e+00	661.00
IUUC-Pno-094815	Phaeosphaeria nodorum	46.91	3.00e-86	310.00
IUUC-Ppa-095367	Physcomitrella patens	30.30	4.00e-48	183.00
IUUC-Pfo-097089	Poecilia formosa	85.67	0.00e+00	652.00
IUUC-Pab-098421	Pongo abelii	88.83	0.00e+00	660.00
IUUC-Pop-099778	Populus trichocarpa	27.88	2.00e-38	150.00
IUUC-Pca-100120	Procavia capensis	63.72	6.00e-118	415.00
IUUC-Ppe-101341	Prunus persica	29.85	4.00e-42	163.00
IUUC-Pva-102960	Pteropus vampyrus	88.54	0.00e+00	656.00
IUUC-Pgr-103538	Puccinia graminis	45.43	9.00e-96	342.00
IUUC-Ptt-103990	Puccinia triticina	47.46	1.00e-26	113.00
IUUC-Pte-104261	Pyrenophora teres	47.19	4.00e-86	310.00
IUUC-Pyt-104780	Pyrenophora triticirepentis	47.47	2.00e-86	311.00
IUUC-Rno-105123	Rattus norvegicus	88.83	0.00e+00	660.00
IUUC-Sce-106315	Saccharomyces cerevisiae	28.11	1.00e-33	135.00
IUUC-Sha-107010	Sarcophilus harrisii	87.97	0.00e+00	654.00
IUUC-Sja-107899	Schizosaccharomyces japonicus	32.16	7.00e-52	196.00
IUUC-Spo-108357	Schizosaccharomyces pombe	28.84	3.00e-31	128.00
IUUC-Ssl-108571	Sclerotinia sclerotiorum	45.01	6.00e-84	303.00
IUUC-Smo-109155	Selaginella moellendorffii	30.67	9.00e-45	172.00
IUUC-Sit-110688	Setaria italica	31.75	1.00e-41	162.00
IUUC-Sly-110891	Solanum lycopersicum	29.87	5.00e-43	166.00
IUUC-Stu-112365	Solanum tuberosum	30.19	3.00e-43	167.00
IUUC-Sar-113309	Sorex araneus	88.83	0.00e+00	660.00
IUUC-Sre-115003	Sporisorium reilianum	48.01	2.00e-101	361.00
IUUC-Ssc-116148	Sus scrofa	88.83	0.00e+00	660.00
IUUC-Tgu-117299	Taeniopygia guttata	88.54	0.00e+00	659.00
IUUC-Tru-117721	Takifugu rubripes	86.82	0.00e+00	657.00
IUUC-Tsy-119493	Tarsius syrichta	87.11	0.00e+00	648.00
IUUC-Tni-120355	Tetraodon nigroviridis	86.53	0.00e+00	634.00
IUUC-Tre-121977	Trichoderma reesei	42.82	3.00e-84	303.00
IUUC-Tvi-122661	Trichoderma virens	42.11	3.00e-83	300.00
IUUC-Tae-123971	Triticum aestivum	30.79	2.00e-41	161.00
IUUC-Tur-125983	Triticum urartu	30.07	2.00e-35	141.00
IUUC-Tme-127031	Tuber melanosporum	49.22	2.00e-87	314.00
IUUC-Tbe-127492	Tupaia belangeri	75.00	1.00e-106	378.00
IUUC-Ttr-128929	Tursiops truncatus	88.83	0.00e+00	660.00
IUUC-Uma-129347	Ustilago maydis	45.09	3.00e-99	353.00
IUUC-Vda-129837	Verticillium dahliae	45.61	2.00e-82	297.00
IUUC-Vpa-130532	Vicugna pacos	74.15	1.00e-138	484.00
IUUC-Vvi-131269	Vitis vinifera	29.75	4.00e-41	159.00
IUUC-Xtr-131985	Xenopus tropicalis	87.39	0.00e+00	655.00
IUUC-Xma-133314	Xiphophorus maculatus	85.96	0.00e+00	652.00
IUUC-Yli-134403	Yarrowia lipolytica	39.26	1.00e-65	242.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence