iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043090

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000839

Gene Name

LOC100810963; GLYMA_06G183800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA06G19540	GLYMA06G19540.1	GLYMA06G19540.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.80e-31	109.6	276	347

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           vpe+f+CpIsle+M+dPv+++sG+ty r+sI+kw++sg+  cP+tr++l++++lvPn++l++liq++c+en+
   Q: 276  VPEDFRCPISLEIMTDPVTISSGQTYNRASIQKWFNSGNLICPKTREKLASTELVPNTALKKLIQKFCSENG 347
           8********************************************************************997 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MADKINNSCE HQRRPLSFPA VRPCVSTSPS TLLASLITLA QNICNFHSNS FVFHRRNVRE 60
TTRQIAILLV LFQELHDRGS IIPHSIRLCF SDLHVTFQKI HFLMQDCSRE SARLWMLTKS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTGCCTGCC AGGTGTTTGA AGAAAAGTAT CCGGTCAGCG CAAGAACAAA CCCAAACCCA 60
TCCACTTTAT AACAATAGTT GGACATTCCT GACCAAGCTC TAGAATATTC AGAAACAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100810963

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000617	Aegilops tauschii	36.21	3.00e-88	319.00
IUUC-Lpe-051010	Leersia perrieri	37.66	3.00e-89	322.00
IUUC-Mtr-058647	Medicago truncatula	60.21	0.00e+00	776.00
IUUC-Obr-076695	Oryza brachyantha	39.56	2.00e-70	260.00
IUUC-Oru-084317	Oryza rufipogon	35.73	1.00e-97	350.00
IUUC-Tur-126514	Triticum urartu	35.81	2.00e-97	349.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence