iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007341

Ensembl Protein ID

AT4G05230.1

UniProt Accession

Q9M0X2; Q9M0X2_ARATH

Genbank Protein ID

AEE82493.1; CAB81065.1

Protein Name

Putative uncharacterized protein AT4g05230; Ubiquitin-like superfamily protein

Genbank Nucleotide ID

CP002687; AL161503

Gene Name

At4g05230; C17L7.150; C17L7_150

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT4G05230	AT4G05230.1	AT4G05230.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_PIM	4.20e-19	69.1	1	74

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkks 74
           m++++ t +g++fe+e+   dtv e K+ki+k + +p+++q L+++G++L+D+  ++++ i + s + l ++ +
   Q: 1    MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCVILNHSRIQLSISSP 74
           89*****************************************************************9988765 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MDVFFETRSG STFEIELGYW DTVLEIKQKI EKYQRIPVSK QTLLFQGNVL QDHLDIEQCV 60
ILNHSRIQLS ISSPDQSRNN IQVFKTEQFP QSNSTEQTSN GHHESTVMIP MSNNNNNNNP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGTGT TCTTCGAGAC TCGGAGTGGT TCCACATTCG AGATTGAATT AGGTTATTGG 60
GATACAGTGT TGGAGATCAA ACAAAAGATC GAGAAGTATC AACGTATCCC AGTTTCCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

SMART

SM00213--UBQ

KEGG

ath:AT4G05230

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000418	Aegilops tauschii	52.38	6.00e-18	83.60
IUUC-Aly-006255	Arabidopsis lyrata	90.82	3.00e-101	360.00
IUUC-Bdi-014814	Brachypodium distachyon	29.33	1.00e-17	82.00
IUUC-Bol-015457	Brassica oleracea	77.40	1.00e-84	304.00
IUUC-Bra-016985	Brassica rapa	77.40	1.00e-83	301.00
IUUC-Gma-043557	Glycine max	45.69	2.00e-39	154.00
IUUC-Hvu-047481	Hordeum vulgare	53.57	5.00e-19	87.40
IUUC-Lpe-051654	Leersia perrieri	38.28	8.00e-25	105.00
IUUC-Mtr-057824	Medicago truncatula	45.50	9.00e-39	152.00
IUUC-Mac-065110	Musa acuminata	53.88	3.00e-56	210.00
IUUC-Obr-076204	Oryza brachyantha	68.09	2.00e-15	75.10
IUUC-Ogl-077464	Oryza glaberrima	51.16	9.00e-18	83.20
IUUC-Ogu-078789	Oryza glumaepatula	51.16	1.00e-17	83.20
IUUC-Oin-079834	Oryza indica	52.56	4.00e-17	81.30
IUUC-Ome-081807	Oryza meridionalis	51.25	2.00e-16	79.00
IUUC-Oni-082949	Oryza nivara	52.38	7.00e-18	83.60
IUUC-Opu-083919	Oryza punctata	50.00	8.00e-17	80.50
IUUC-Oru-084806	Oryza rufipogon	52.38	7.00e-18	83.60
IUUC-Pop-099086	Populus trichocarpa	41.67	2.00e-36	144.00
IUUC-Ppe-101213	Prunus persica	43.01	3.00e-39	154.00
IUUC-Sit-109925	Setaria italica	47.67	2.00e-17	82.80
IUUC-Sly-110909	Solanum lycopersicum	43.98	3.00e-28	117.00
IUUC-Sbi-114011	Sorghum bicolor	31.88	3.00e-22	97.40
IUUC-Tca-121426	Theobroma cacao	46.23	4.00e-35	140.00
IUUC-Tae-124195	Triticum aestivum	56.25	3.00e-06	44.30
IUUC-Tur-126620	Triticum urartu	36.65	8.00e-28	115.00
IUUC-Vvi-131461	Vitis vinifera	39.08	2.00e-41	162.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence