iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058401

Ensembl Protein ID

AES81177

UniProt Accession

G7L5Y2; G7L5Y2_MEDTR

Genbank Protein ID

AES81177.1

Protein Name

General transcription factor IIH subunit 2

Genbank Nucleotide ID

CM001223

Gene Name

MTR_7g089440

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_7g089440	AES81177	AES81177

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	40.00	8.00e-79	288.00	IUUC-Sce-106434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MNNIAGKPLN GDLEDDDEDE ANDDGLEAWE RAYTEDRSWE SLQEDESGLL RPIDTTAIHH 60
AQYRRRLRAL ASNAATARIQ KGLIRYLYIV VDLSKAASER DFRPSRMAVI AKQVELFIRE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACCAATTCA ATTTCATTTC CTTTTCCCCT TTCTCTTTCA TCTGATGCGC GTTCCTCTTT 60
TTTCTTCTCC CAGCGAAAGC AAAACCACCG AACAACATCC ACCACCACAC CACTGCCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007198--Ssl1-like
IPR004595--TFIIH_C1-like_dom
IPR012170--TFIIH_SSL1/p44
IPR002035--VWF_A
IPR013087--Znf_C2H2_type

PROSITE

PS50234--VWFA
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF07975--C1_4
PF04056--Ssl1

SMART

SM01047--C1_4
SM00327--VWA

Gene Ontology

GO:0000439--C:core TFIIH complex
GO:0008270--F:zinc ion binding
GO:0006289--P:nucleotide-excision repair
GO:0006351--P:transcription, DNA-templated

KEGG

mtr:MTR_7g089440

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000536	Aegilops tauschii	72.00	3.00e-118	417.00
IUUC-Aml-002041	Ailuropoda melanoleuca	41.71	1.00e-80	292.00
IUUC-Atr-003056	Amborella trichopoda	72.19	4.00e-140	489.00
IUUC-Apl-003464	Anas platyrhynchos	40.79	4.00e-73	267.00
IUUC-Aca-004745	Anolis carolinensis	43.54	1.00e-79	289.00
IUUC-Aly-005559	Arabidopsis lyrata	75.57	7.00e-170	589.00
IUUC-Ath-007556	Arabidopsis thaliana	75.57	7.00e-170	589.00
IUUC-Ago-007851	Ashbya gossypii	40.75	2.00e-80	292.00
IUUC-Acl-008100	Aspergillus clavatus	37.35	3.00e-80	291.00
IUUC-Afl-008649	Aspergillus flavus	36.47	1.00e-10	57.00
IUUC-Afu-009066	Aspergillus fumigatus	38.24	5.00e-81	294.00
IUUC-Ani-009372	Aspergillus nidulans	38.71	6.00e-80	290.00
IUUC-Ang-009726	Aspergillus niger	37.75	6.00e-84	303.00
IUUC-Aor-010135	Aspergillus oryzae	37.50	7.00e-79	286.00
IUUC-Ate-010399	Aspergillus terreus	33.97	2.00e-20	91.30
IUUC-Ame-011618	Astyanax mexicanus	41.60	9.00e-90	323.00
IUUC-Bgr-012154	Blumeria graminis	38.65	1.00e-75	276.00
IUUC-Bta-012353	Bos taurus	41.21	2.00e-83	301.00
IUUC-Bci-013932	Botrytis cinerea	39.04	2.00e-79	289.00
IUUC-Bdi-014391	Brachypodium distachyon	74.30	4.00e-159	553.00
IUUC-Bol-015128	Brassica oleracea	75.68	2.00e-174	604.00
IUUC-Bra-017932	Brassica rapa	75.68	7.00e-175	605.00
IUUC-Cel-018649	Caenorhabditis elegans	38.46	2.00e-68	252.00
IUUC-Cja-018776	Callithrix jacchus	41.46	7.00e-81	293.00
IUUC-Cfa-020584	Canis familiaris	41.71	2.00e-81	295.00
IUUC-Cpo-021300	Cavia porcellus	41.21	1.00e-79	289.00
IUUC-Cre-022657	Chlamydomonas reinhardtii	50.90	3.00e-95	341.00
IUUC-Csa-024092	Chlorocebus sabaeus	41.46	4.00e-80	291.00
IUUC-Cho-024919	Choloepus hoffmanni	42.38	2.00e-39	154.00
IUUC-Cin-025386	Ciona intestinalis	40.05	4.00e-85	307.00
IUUC-Csv-026295	Ciona savignyi	39.15	3.00e-82	298.00
IUUC-Cgl-026612	Colletotrichum gloeosporioides	38.68	5.00e-71	261.00
IUUC-Cne-026956	Cryptococcus neoformans	38.35	3.00e-78	285.00
IUUC-Cme-027150	Cyanidioschyzon merolae	34.15	1.00e-54	207.00
IUUC-Dre-027962	Danio rerio	41.21	8.00e-89	319.00
IUUC-Dno-029979	Dasypus novemcinctus	40.86	3.00e-72	264.00
IUUC-Dse-031405	Dothistroma septosporum	39.79	3.00e-75	275.00
IUUC-Dme-031710	Drosophila melanogaster	39.41	2.00e-82	298.00
IUUC-Ete-032631	Echinops telfairi	39.20	5.00e-74	270.00
IUUC-Eca-034054	Equus caballus	42.46	7.00e-82	296.00
IUUC-Fca-035724	Felis catus	39.45	2.00e-76	278.00
IUUC-Fal-036987	Ficedula albicollis	41.21	6.00e-89	320.00
IUUC-Fox-037692	Fusarium oxysporum	40.24	7.00e-82	296.00
IUUC-Fso-038442	Fusarium solani	41.69	2.00e-82	299.00
IUUC-Gmo-039273	Gadus morhua	42.21	8.00e-88	316.00
IUUC-Ggr-040009	Gaeumannomyces graminis	40.88	7.00e-64	237.00
IUUC-Gga-041089	Gallus gallus	40.95	3.00e-87	315.00
IUUC-Gac-041978	Gasterosteus aculeatus	40.20	7.00e-82	296.00
IUUC-Gma-043371	Glycine max	86.15	0.00e+00	713.00
IUUC-Hsa-046001	Homo sapiens	41.46	7.00e-80	290.00
IUUC-Itr-048355	Ictidomys tridecemlineatus	42.00	1.00e-86	313.00
IUUC-Kpa-049235	Komagataella pastoris	40.73	1.00e-76	279.00
IUUC-Lch-049926	Latimeria chalumnae	41.71	9.00e-85	306.00
IUUC-Lpe-051352	Leersia perrieri	73.92	4.00e-155	540.00
IUUC-Loc-051987	Lepisosteus oculatus	41.85	2.00e-88	318.00
IUUC-Lma-053171	Leptosphaeria maculans	35.48	1.00e-63	236.00
IUUC-Laf-054372	Loxodonta africana	41.71	5.00e-84	303.00
IUUC-Mcc-055108	Macaca mulatta	41.46	4.00e-80	291.00
IUUC-Mor-056990	Magnaporthe oryzae	37.13	3.00e-76	278.00
IUUC-Mla-059186	Melampsora laricipopulina	39.76	2.00e-87	315.00
IUUC-Mvi-060262	Microbotryum violaceum	40.54	2.00e-89	322.00
IUUC-Mmr-061688	Microcebus murinus	37.73	2.00e-67	248.00
IUUC-Mdo-062154	Monodelphis domestica	41.46	7.00e-85	306.00
IUUC-Mmu-064232	Mus musculus	40.85	2.00e-79	288.00
IUUC-Mac-065091	Musa acuminata	73.82	4.00e-167	580.00
IUUC-Mpu-066747	Mustela putorius furo	38.69	2.00e-67	248.00
IUUC-Mlu-067799	Myotis lucifugus	38.89	2.00e-69	255.00
IUUC-Nfi-068371	Neosartorya fischeri	37.50	3.00e-12	63.90
IUUC-Ncr-068704	Neurospora crassa	39.01	7.00e-80	290.00
IUUC-Nle-069054	Nomascus leucogenys	41.46	3.00e-80	291.00
IUUC-Ont-071624	Oreochromis niloticus	42.46	7.00e-87	313.00
IUUC-Oan-072898	Ornithorhynchus anatinus	41.21	1.00e-84	306.00
IUUC-Ocu-074289	Oryctolagus cuniculus	40.45	6.00e-64	236.00
IUUC-Oba-075985	Oryza barthii	73.42	6.00e-154	536.00
IUUC-Obr-076887	Oryza brachyantha	73.67	2.00e-159	554.00
IUUC-Ogl-077823	Oryza glaberrima	73.42	6.00e-154	536.00
IUUC-Ogu-078412	Oryza glumaepatula	77.27	3.00e-140	491.00
IUUC-Oin-079569	Oryza indica	76.11	3.00e-118	417.00
IUUC-Olo-080249	Oryza longistaminata	76.63	9.00e-118	416.00
IUUC-Ome-081240	Oryza meridionalis	77.27	1.00e-139	489.00
IUUC-Oni-082152	Oryza nivara	77.27	1.00e-139	488.00
IUUC-Opu-084011	Oryza punctata	73.91	5.00e-154	536.00
IUUC-Oru-084719	Oryza rufipogon	74.79	5.00e-143	499.00
IUUC-Osa-085286	Oryza sativa	73.42	2.00e-154	538.00
IUUC-Ola-086525	Oryzias latipes	40.00	5.00e-74	270.00
IUUC-Olu-087876	Ostreococcus lucimarinus	46.15	5.00e-87	313.00
IUUC-Oga-088125	Otolemur garnettii	41.21	3.00e-82	297.00
IUUC-Oar-089701	Ovis aries	41.21	2.00e-83	301.00
IUUC-Ptr-091218	Pan troglodytes	41.21	5.00e-80	290.00
IUUC-Pan-091755	Papio anubis	41.46	4.00e-80	291.00
IUUC-Psi-094061	Pelodiscus sinensis	40.70	1.00e-84	306.00
IUUC-Pma-094430	Petromyzon marinus	42.46	2.00e-58	218.00
IUUC-Pno-094900	Phaeosphaeria nodorum	30.39	1.00e-37	150.00
IUUC-Ppa-095895	Physcomitrella patens	59.65	5.00e-148	516.00
IUUC-Pfo-096297	Poecilia formosa	42.86	2.00e-58	218.00
IUUC-Pab-097717	Pongo abelii	41.46	4.00e-80	291.00
IUUC-Pop-098938	Populus trichocarpa	77.63	8.00e-176	608.00
IUUC-Pca-100389	Procavia capensis	38.86	8.00e-66	243.00
IUUC-Ppe-102045	Prunus persica	80.25	6.00e-180	622.00
IUUC-Pva-102357	Pteropus vampyrus	46.92	6.00e-40	156.00
IUUC-Pgr-103399	Puccinia graminis	40.43	1.00e-85	310.00
IUUC-Ptt-103872	Puccinia triticina	41.25	6.00e-87	313.00
IUUC-Pte-104092	Pyrenophora teres	38.54	4.00e-62	231.00
IUUC-Pyt-104669	Pyrenophora triticirepentis	38.68	4.00e-62	231.00
IUUC-Rno-105515	Rattus norvegicus	41.10	7.00e-83	300.00
IUUC-Sce-106434	Saccharomyces cerevisiae	40.85	2.00e-81	295.00
IUUC-Sha-106808	Sarcophilus harrisii	41.21	2.00e-83	301.00
IUUC-Sja-107995	Schizosaccharomyces japonicus	41.77	9.00e-80	290.00
IUUC-Spo-108044	Schizosaccharomyces pombe	41.62	5.00e-88	317.00
IUUC-Smo-109581	Selaginella moellendorffii	57.65	9.00e-137	479.00
IUUC-Sit-110704	Setaria italica	73.87	5.00e-158	550.00
IUUC-Sly-110990	Solanum lycopersicum	75.08	5.00e-142	496.00
IUUC-Stu-112542	Solanum tuberosum	73.87	2.00e-93	334.00
IUUC-Sar-113766	Sorex araneus	41.16	3.00e-69	254.00
IUUC-Sbi-114016	Sorghum bicolor	74.75	1.00e-158	551.00
IUUC-Sre-115099	Sporisorium reilianum	38.06	2.00e-82	298.00
IUUC-Ssc-115277	Sus scrofa	41.46	4.00e-78	284.00
IUUC-Tgu-117343	Taeniopygia guttata	40.45	1.00e-87	316.00
IUUC-Tru-118397	Takifugu rubripes	40.95	1.00e-82	299.00
IUUC-Tni-120272	Tetraodon nigroviridis	41.50	1.00e-83	302.00
IUUC-Tca-121514	Theobroma cacao	82.07	0.00e+00	665.00
IUUC-Tre-121990	Trichoderma reesei	39.76	7.00e-77	280.00
IUUC-Tvi-122504	Trichoderma virens	40.92	3.00e-75	274.00
IUUC-Tae-123153	Triticum aestivum	73.92	9.00e-157	545.00
IUUC-Tur-126693	Triticum urartu	78.80	1.00e-121	428.00
IUUC-Tme-127011	Tuber melanosporum	40.24	8.00e-82	296.00
IUUC-Tbe-127939	Tupaia belangeri	41.46	5.00e-80	290.00
IUUC-Ttr-128889	Tursiops truncatus	35.68	6.00e-68	250.00
IUUC-Uma-129450	Ustilago maydis	38.16	5.00e-83	301.00
IUUC-Vda-129919	Verticillium dahliae	38.18	9.00e-70	256.00
IUUC-Vvi-130928	Vitis vinifera	79.45	0.00e+00	640.00
IUUC-Xtr-131891	Xenopus tropicalis	36.97	6.00e-75	273.00
IUUC-Xma-133260	Xiphophorus maculatus	42.06	1.00e-57	215.00
IUUC-Yli-134578	Yarrowia lipolytica	41.32	1.00e-77	283.00
IUUC-Zma-135427	Zea mays	74.18	5.00e-157	546.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence