iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126693

Ensembl Protein ID

TRIUR3_07258-P1

UniProt Accession

M7ZQU0; M7ZQU0_TRIUA

Genbank Protein ID

EMS50464.1

Protein Name

General transcription factor IIH subunit 2

Genbank Nucleotide ID

KD231162

Gene Name

TRIUR3_07258

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_07258	TRIUR3_07258-T1	TRIUR3_07258-P1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	43.97	3.00e-60	226.00	IUUC-Sce-106434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Triticum urartu

Protein Sequence
(Fasta)

MDYRPSRMAV VAKCAEAFIR EFFDQNPLSH VGLVTIKDGI SHRLTEIGGS PESQINALMG 60
KLECSGDSSL QNALELVNGY LNQIPSYGHK EVLFLYSALN TCDPGDIMET IEKCKKSKVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTATC GCCCTAGTCG AATGGCTGTT GTTGCTAAGT GTGCTGAGGC ATTCATAAGG 60
GAATTCTTCG ATCAGAATCC CTTGAGCCAT GTTGGGCTAG TGACAATTAA AGATGGCATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007198--Ssl1-like
IPR012170--TFIIH_SSL1/p44
IPR002035--VWF_A

Pfam

PF04056--Ssl1

Gene Ontology

GO:0000439--C:core TFIIH complex
GO:0005675--C:holo TFIIH complex
GO:0006289--P:nucleotide-excision repair
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000536	Aegilops tauschii	86.32	1.00e-136	478.00
IUUC-Aml-002041	Ailuropoda melanoleuca	43.30	9.00e-60	223.00
IUUC-Atr-003056	Amborella trichopoda	70.94	7.00e-115	405.00
IUUC-Apl-003464	Anas platyrhynchos	42.42	2.00e-54	204.00
IUUC-Aca-004745	Anolis carolinensis	44.83	3.00e-63	234.00
IUUC-Aly-005559	Arabidopsis lyrata	76.26	9.00e-112	395.00
IUUC-Ath-007556	Arabidopsis thaliana	76.26	8.00e-112	395.00
IUUC-Ago-007851	Ashbya gossypii	43.53	7.00e-59	220.00
IUUC-Acl-008100	Aspergillus clavatus	42.31	2.00e-57	215.00
IUUC-Afl-008649	Aspergillus flavus	36.23	2.00e-11	59.30
IUUC-Afu-009066	Aspergillus fumigatus	41.80	3.00e-58	218.00
IUUC-Ani-009372	Aspergillus nidulans	43.85	2.00e-59	222.00
IUUC-Ang-009726	Aspergillus niger	41.63	2.00e-60	225.00
IUUC-Aor-010135	Aspergillus oryzae	43.62	1.00e-58	219.00
IUUC-Ate-010399	Aspergillus terreus	36.71	2.00e-12	64.70
IUUC-Ame-011618	Astyanax mexicanus	44.27	4.00e-61	227.00
IUUC-Bgr-012154	Blumeria graminis	41.09	2.00e-54	206.00
IUUC-Bta-012353	Bos taurus	43.30	2.00e-62	232.00
IUUC-Bci-013932	Botrytis cinerea	42.25	4.00e-59	221.00
IUUC-Bdi-014391	Brachypodium distachyon	93.10	6.00e-133	466.00
IUUC-Bol-015128	Brassica oleracea	77.17	2.00e-111	395.00
IUUC-Bra-017932	Brassica rapa	77.17	1.00e-111	395.00
IUUC-Cel-018649	Caenorhabditis elegans	41.60	2.00e-48	185.00
IUUC-Cja-018776	Callithrix jacchus	42.91	3.00e-60	224.00
IUUC-Cfa-020584	Canis familiaris	43.30	2.00e-60	225.00
IUUC-Cpo-021300	Cavia porcellus	42.91	2.00e-59	222.00
IUUC-Cre-022657	Chlamydomonas reinhardtii	48.46	3.00e-65	241.00
IUUC-Csa-024092	Chlorocebus sabaeus	42.91	3.00e-59	221.00
IUUC-Cho-024919	Choloepus hoffmanni	41.12	9.00e-37	145.00
IUUC-Cin-025386	Ciona intestinalis	41.99	3.00e-57	214.00
IUUC-Csv-026295	Ciona savignyi	42.31	8.00e-55	206.00
IUUC-Cgl-026612	Colletotrichum gloeosporioides	42.25	3.00e-53	201.00
IUUC-Cne-026956	Cryptococcus neoformans	38.32	2.00e-52	199.00
IUUC-Cme-027150	Cyanidioschyzon merolae	37.64	9.00e-46	177.00
IUUC-Dre-027962	Danio rerio	45.59	7.00e-63	233.00
IUUC-Dno-029979	Dasypus novemcinctus	42.91	3.00e-59	221.00
IUUC-Dse-031405	Dothistroma septosporum	45.20	2.00e-59	222.00
IUUC-Dme-031710	Drosophila melanogaster	41.76	1.00e-58	219.00
IUUC-Ete-032631	Echinops telfairi	39.31	5.00e-52	197.00
IUUC-Eca-034054	Equus caballus	44.06	3.00e-62	231.00
IUUC-Fca-035724	Felis catus	43.19	9.00e-60	223.00
IUUC-Fal-036987	Ficedula albicollis	44.44	1.00e-61	229.00
IUUC-Fox-037692	Fusarium oxysporum	43.80	5.00e-60	224.00
IUUC-Fso-038442	Fusarium solani	46.12	1.00e-59	223.00
IUUC-Gmo-039273	Gadus morhua	46.04	2.00e-63	235.00
IUUC-Ggr-040009	Gaeumannomyces graminis	40.57	7.00e-54	204.00
IUUC-Gga-041089	Gallus gallus	43.30	9.00e-61	226.00
IUUC-Gac-041978	Gasterosteus aculeatus	45.00	1.00e-58	219.00
IUUC-Gma-043371	Glycine max	81.12	4.00e-124	436.00
IUUC-Hsa-046001	Homo sapiens	42.91	5.00e-59	220.00
IUUC-Itr-048355	Ictidomys tridecemlineatus	43.30	9.00e-60	223.00
IUUC-Kpa-049235	Komagataella pastoris	45.95	1.00e-61	229.00
IUUC-Lch-049926	Latimeria chalumnae	43.35	4.00e-56	211.00
IUUC-Lpe-051352	Leersia perrieri	93.73	2.00e-129	454.00
IUUC-Loc-051987	Lepisosteus oculatus	44.06	9.00e-62	229.00
IUUC-Lma-053171	Leptosphaeria maculans	39.11	2.00e-49	189.00
IUUC-Laf-054372	Loxodonta africana	43.30	2.00e-62	231.00
IUUC-Mcc-055108	Macaca mulatta	42.91	3.00e-59	221.00
IUUC-Mor-056990	Magnaporthe oryzae	41.61	2.00e-57	215.00
IUUC-Mtr-058401	Medicago truncatula	78.80	2.00e-121	428.00
IUUC-Mla-059186	Melampsora laricipopulina	46.59	4.00e-68	251.00
IUUC-Mvi-060262	Microbotryum violaceum	39.67	5.00e-62	231.00
IUUC-Mmr-061688	Microcebus murinus	37.55	4.00e-46	177.00
IUUC-Mdo-062154	Monodelphis domestica	42.75	3.00e-58	218.00
IUUC-Mmu-064232	Mus musculus	42.59	1.00e-58	219.00
IUUC-Mac-065091	Musa acuminata	81.82	7.00e-118	416.00
IUUC-Mpu-066747	Mustela putorius furo	39.47	8.00e-47	180.00
IUUC-Mlu-067799	Myotis lucifugus	39.62	2.00e-50	192.00
IUUC-Nfi-068371	Neosartorya fischeri	37.50	2.00e-13	67.80
IUUC-Ncr-068704	Neurospora crassa	45.35	5.00e-62	230.00
IUUC-Nle-069054	Nomascus leucogenys	42.91	2.00e-59	221.00
IUUC-Ont-071624	Oreochromis niloticus	45.38	2.00e-61	228.00
IUUC-Oan-072898	Ornithorhynchus anatinus	42.75	2.00e-59	221.00
IUUC-Ocu-074289	Oryctolagus cuniculus	39.24	8.00e-48	182.00
IUUC-Oba-075985	Oryza barthii	93.68	1.00e-128	452.00
IUUC-Obr-076887	Oryza brachyantha	92.89	4.00e-127	447.00
IUUC-Ogl-077823	Oryza glaberrima	93.68	1.00e-128	452.00
IUUC-Ogu-078412	Oryza glumaepatula	83.71	1.00e-139	489.00
IUUC-Oin-079569	Oryza indica	74.92	2.00e-115	408.00
IUUC-Olo-080249	Oryza longistaminata	92.63	2.00e-106	378.00
IUUC-Ome-081240	Oryza meridionalis	78.20	1.00e-139	489.00
IUUC-Oni-082152	Oryza nivara	79.15	8.00e-137	479.00
IUUC-Opu-084011	Oryza punctata	94.47	1.00e-129	455.00
IUUC-Oru-084719	Oryza rufipogon	83.71	1.00e-138	485.00
IUUC-Osa-085286	Oryza sativa	93.28	1.00e-128	452.00
IUUC-Ola-086525	Oryzias latipes	44.14	2.00e-47	182.00
IUUC-Olu-087876	Ostreococcus lucimarinus	49.20	2.00e-64	238.00
IUUC-Oga-088125	Otolemur garnettii	42.91	1.00e-60	226.00
IUUC-Oar-089701	Ovis aries	43.30	2.00e-62	232.00
IUUC-Ptr-091218	Pan troglodytes	42.53	4.00e-59	220.00
IUUC-Pan-091755	Papio anubis	42.91	3.00e-59	221.00
IUUC-Psi-094061	Pelodiscus sinensis	43.68	4.00e-59	221.00
IUUC-Pma-094430	Petromyzon marinus	45.56	1.00e-43	168.00
IUUC-Pno-094900	Phaeosphaeria nodorum	45.00	3.00e-22	99.40
IUUC-Ppa-095895	Physcomitrella patens	63.40	1.00e-108	385.00
IUUC-Pfo-096297	Poecilia formosa	46.67	2.00e-43	168.00
IUUC-Pab-097717	Pongo abelii	42.91	3.00e-59	221.00
IUUC-Pop-098938	Populus trichocarpa	82.00	4.00e-112	397.00
IUUC-Pca-100389	Procavia capensis	41.00	7.00e-55	206.00
IUUC-Ppe-102045	Prunus persica	78.49	6.00e-108	383.00
IUUC-Pva-102357	Pteropus vampyrus	47.97	1.00e-32	131.00
IUUC-Pgr-103399	Puccinia graminis	45.63	7.00e-64	236.00
IUUC-Ptt-103872	Puccinia triticina	46.59	7.00e-64	236.00
IUUC-Pte-104092	Pyrenophora teres	38.83	6.00e-53	200.00
IUUC-Pyt-104669	Pyrenophora triticirepentis	38.83	4.00e-53	201.00
IUUC-Rno-105515	Rattus norvegicus	43.51	3.00e-61	228.00
IUUC-Sce-106434	Saccharomyces cerevisiae	43.97	4.00e-61	228.00
IUUC-Sha-106808	Sarcophilus harrisii	42.37	2.00e-57	215.00
IUUC-Sja-107995	Schizosaccharomyces japonicus	40.94	1.00e-53	202.00
IUUC-Spo-108044	Schizosaccharomyces pombe	44.49	1.00e-62	233.00
IUUC-Smo-109581	Selaginella moellendorffii	60.40	1.00e-92	332.00
IUUC-Sit-110704	Setaria italica	93.92	2.00e-132	464.00
IUUC-Sly-110990	Solanum lycopersicum	74.18	2.00e-108	384.00
IUUC-Stu-112542	Solanum tuberosum	72.67	6.00e-64	236.00
IUUC-Sar-113766	Sorex araneus	41.38	2.00e-56	211.00
IUUC-Sbi-114016	Sorghum bicolor	95.60	3.00e-128	450.00
IUUC-Sre-115099	Sporisorium reilianum	39.45	3.00e-56	211.00
IUUC-Ssc-115277	Sus scrofa	42.91	1.00e-59	223.00
IUUC-Tgu-117343	Taeniopygia guttata	44.83	1.00e-61	229.00
IUUC-Tru-118397	Takifugu rubripes	45.38	6.00e-59	220.00
IUUC-Tni-120272	Tetraodon nigroviridis	43.77	7.00e-57	213.00
IUUC-Tca-121514	Theobroma cacao	81.93	3.00e-123	434.00
IUUC-Tre-121990	Trichoderma reesei	44.96	3.00e-59	221.00
IUUC-Tvi-122504	Trichoderma virens	44.19	3.00e-59	221.00
IUUC-Tae-123153	Triticum aestivum	96.17	9.00e-136	475.00
IUUC-Tme-127011	Tuber melanosporum	45.53	3.00e-59	221.00
IUUC-Tbe-127939	Tupaia belangeri	42.91	2.00e-59	221.00
IUUC-Ttr-128889	Tursiops truncatus	38.72	7.00e-45	173.00
IUUC-Uma-129450	Ustilago maydis	39.50	6.00e-55	207.00
IUUC-Vda-129919	Verticillium dahliae	44.21	4.00e-54	204.00
IUUC-Vvi-130928	Vitis vinifera	78.28	2.00e-113	401.00
IUUC-Xtr-131891	Xenopus tropicalis	38.66	6.00e-49	187.00
IUUC-Xma-133260	Xiphophorus maculatus	46.11	4.00e-43	167.00
IUUC-Yli-134578	Yarrowia lipolytica	46.90	9.00e-57	213.00
IUUC-Zma-135427	Zea mays	94.00	7.00e-126	442.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence