iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111136

Ensembl Protein ID

Solyc02g093520.2.1

UniProt Accession

K4BDE8; K4BDE8_SOLLC

Genbank Protein ID

AGL95793.1

Protein Name

RING-finger protein

Genbank Nucleotide ID

KC757132

Gene Name

RFP1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc02g093520.2	Solyc02g093520.2.1	Solyc02g093520.2.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	88.55	0.00e+00	803.00	IUUC-Ots-000026
E3 activity/RING/RING	76.51	2.00e-180	622.00	IUUC-Ots-000013

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MGGKSSREDS WRQASSTRSS SWNQYDYPQT AYPQDSYSYS QQTAVPSYAP PPPSQQNYPP 60
QHQHNYSSQP QQNYASHEHE SRTHTHAPRP RLDRRYSRIA DNYNSLDEVT EALARAGLES 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGTTATCCT GCTGTCGTAA TTGCGTAGCT TGTAAAAGGA CAATGTAGAA GAGCCAAAGT 60
CTATATTGAG TCGGTTTTGA ATGATTACAA GTCTCAATTT GATAGCCGCC TTTCTCTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR010734--Copine
IPR002035--VWF_A
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF07002--Copine

SMART

SM00327--VWA

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

sly:101258318

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001090	Aegilops tauschii	71.50	1.00e-153	535.00
IUUC-Atr-003148	Amborella trichopoda	62.00	1.00e-146	511.00
IUUC-Ame-011404	Astyanax mexicanus	32.84	1.00e-27	117.00
IUUC-Bta-013305	Bos taurus	34.27	2.00e-25	110.00
IUUC-Bdi-014521	Brachypodium distachyon	70.05	2.00e-160	557.00
IUUC-Cpo-022547	Cavia porcellus	33.74	3.00e-27	117.00
IUUC-Dre-027464	Danio rerio	33.68	1.00e-28	120.00
IUUC-Ete-032325	Echinops telfairi	31.70	1.00e-23	103.00
IUUC-Eca-034145	Equus caballus	31.98	3.00e-25	109.00
IUUC-Eeu-035307	Erinaceus europaeus	34.80	6.00e-25	108.00
IUUC-Gmo-038771	Gadus morhua	35.08	6.00e-28	117.00
IUUC-Gga-040253	Gallus gallus	32.29	9.00e-28	117.00
IUUC-Gac-042022	Gasterosteus aculeatus	35.08	4.00e-28	118.00
IUUC-Gma-043577	Glycine max	73.63	0.00e+00	635.00
IUUC-Hvu-047606	Hordeum vulgare	70.83	6.00e-167	579.00
IUUC-Itr-048121	Ictidomys tridecemlineatus	34.27	2.00e-25	109.00
IUUC-Lch-049873	Latimeria chalumnae	34.27	7.00e-28	117.00
IUUC-Lpe-051660	Leersia perrieri	67.32	3.00e-161	560.00
IUUC-Loc-052575	Lepisosteus oculatus	35.08	5.00e-28	118.00
IUUC-Meu-056765	Macropus eugenii	34.27	2.00e-22	99.80
IUUC-Mtr-058065	Medicago truncatula	71.13	4.00e-180	623.00
IUUC-Mla-058982	Melampsora laricipopulina	26.58	1.20e-01	30.00
IUUC-Mga-059862	Meleagris gallopavo	34.88	1.00e-27	117.00
IUUC-Mmu-064072	Mus musculus	32.07	4.00e-26	112.00
IUUC-Mac-065151	Musa acuminata	72.57	2.00e-172	597.00
IUUC-Mlu-067845	Myotis lucifugus	34.82	1.00e-26	113.00
IUUC-Ont-071452	Oreochromis niloticus	35.08	4.00e-28	118.00
IUUC-Oan-073203	Ornithorhynchus anatinus	32.13	3.00e-26	112.00
IUUC-Oba-075144	Oryza barthii	71.43	2.00e-163	567.00
IUUC-Obr-076544	Oryza brachyantha	70.69	1.00e-161	561.00
IUUC-Ogl-077518	Oryza glaberrima	71.08	8.00e-162	562.00
IUUC-Ogu-078702	Oryza glumaepatula	71.43	2.00e-163	568.00
IUUC-Oin-079126	Oryza indica	67.41	4.00e-157	547.00
IUUC-Olo-080405	Oryza longistaminata	70.00	6.00e-149	519.00
IUUC-Ome-081659	Oryza meridionalis	72.91	3.00e-167	580.00
IUUC-Oni-082579	Oryza nivara	71.67	6.00e-164	569.00
IUUC-Opu-083235	Oryza punctata	71.18	2.00e-163	567.00
IUUC-Oru-084447	Oryza rufipogon	71.67	6.00e-164	569.00
IUUC-Osa-085737	Oryza sativa	72.77	1.00e-166	578.00
IUUC-Ola-087558	Oryzias latipes	35.89	9.00e-29	120.00
IUUC-Oar-089570	Ovis aries	34.27	1.00e-24	107.00
IUUC-Pfo-097293	Poecilia formosa	32.00	1.00e-28	120.00
IUUC-Pab-098607	Pongo abelii	34.68	2.00e-25	109.00
IUUC-Pop-099752	Populus trichocarpa	65.52	5.00e-173	599.00
IUUC-Pca-100751	Procavia capensis	32.66	1.00e-23	103.00
IUUC-Ppe-101440	Prunus persica	65.67	1.00e-176	611.00
IUUC-Pva-102684	Pteropus vampyrus	35.48	8.00e-26	111.00
IUUC-Pgr-103353	Puccinia graminis	25.40	2.30e-02	32.00
IUUC-Rno-104855	Rattus norvegicus	31.72	7.00e-27	114.00
IUUC-Smo-109395	Selaginella moellendorffii	59.86	1.00e-139	488.00
IUUC-Sit-110666	Setaria italica	71.60	9.00e-166	575.00
IUUC-Stu-112115	Solanum tuberosum	93.50	0.00e+00	850.00
IUUC-Sbi-114268	Sorghum bicolor	71.46	4.00e-167	580.00
IUUC-Tru-118245	Takifugu rubripes	31.76	2.00e-28	120.00
IUUC-Tsy-119089	Tarsius syrichta	34.27	3.00e-23	102.00
IUUC-Tni-119926	Tetraodon nigroviridis	35.63	1.00e-29	124.00
IUUC-Tca-121637	Theobroma cacao	66.13	1.00e-179	621.00
IUUC-Tae-124799	Triticum aestivum	70.30	3.00e-161	561.00
IUUC-Tur-126194	Triticum urartu	68.17	1.00e-137	482.00
IUUC-Tbe-127814	Tupaia belangeri	31.45	2.00e-23	102.00
IUUC-Ttr-128567	Tursiops truncatus	34.57	4.00e-25	108.00
IUUC-Vpa-130269	Vicugna pacos	31.98	2.00e-25	109.00
IUUC-Vvi-131538	Vitis vinifera	71.87	2.00e-177	614.00
IUUC-Xma-133656	Xiphophorus maculatus	33.08	2.00e-28	119.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence