iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005642

Ensembl Protein ID

fgenesh1_pm.C_scaffold_3002040

UniProt Accession

D7L2J0; D7L2J0_ARALL

Genbank Protein ID

EFH59654.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

GL348715

Gene Name

IAA7; ARALYDRAFT_319024

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_3002040	fgenesh1_pm.C_scaffold_3002040	fgenesh1_pm.C_scaffold_3002040

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	2.90e-16	60.1	126	222

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 4    vkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlk 58
           vkvs++g+++++++dl+ + +++dL +a+++ +                         l+ se+ + YeD+dGD++ l+
   Q: 126  VKVSMDGAPYLRKVDLKMYKSYQDLSDALAKmFSsftmgnygaqgmidfmnesklmnLLNSSEYVPSYEDKDGDWM-LV 203
           9******************************622566999**************9977788***************.** PP
   S: 59   sDedldkavsllaskksllrlliqk 83
           +D++++++v+      s++rl+i+k
   Q: 204  GDVPWEMFVE------SCKRLRIMK 222
           **********......********8 PP

Organism

Arabidopsis lyrata

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MIGQLMNLKA TELCLGLPGG AEAVESPAKS AVGSKRGFSE TVDLMLNLQS NKEGSVDLNN 60
VAAAPKEKTT LKDPSKPPTK AQVVGWPPVR NYRKNMMTQQ KTSGVEEASS EKAGSGGGGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCGGAC AACTTATGAA CCTCAAGGCG ACGGAGCTCT GTCTTGGTCT CCCCGGCGGC 60
GCTGAAGCCG TTGAGAGTCC GGCCAAATCG GCGGTGGGAA GCAAGAGAGG CTTCTCCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0009630--P:gravitropism
GO:0006355--P:regulation of transcription, DNA-templated
GO:0009753--P:response to jasmonic acid
GO:0009414--P:response to water deprivation
GO:0009611--P:response to wounding
GO:0006351--P:transcription, DNA-templated

KEGG

aly:ARALYDRAFT_319024

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000264	Aegilops tauschii	62.66	4.00e-48	183.00
IUUC-Ath-006734	Arabidopsis thaliana	90.91	6.00e-123	432.00
IUUC-Bol-015767	Brassica oleracea	89.21	1.00e-113	401.00
IUUC-Bra-017171	Brassica rapa	89.21	2.00e-120	424.00
IUUC-Ogu-078911	Oryza glumaepatula	55.04	8.00e-66	242.00
IUUC-Ome-081785	Oryza meridionalis	60.25	1.00e-45	176.00
IUUC-Ppa-095740	Physcomitrella patens	44.72	1.00e-32	133.00
IUUC-Sly-111331	Solanum lycopersicum	70.83	5.00e-80	289.00
IUUC-Tre-122196	Trichoderma reesei	36.54	2.50e-01	30.00
IUUC-Ttr-128931	Tursiops truncatus	31.03	1.90e-01	30.00
IUUC-Vvi-131523	Vitis vinifera	77.25	8.00e-85	305.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence