iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bdi-014355

Ensembl Protein ID

BRADI3G05920.1

UniProt Accession

I1HXX4; I1HXX4_BRADI

Genbank Protein ID

KQJ93639.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100823267; BRADI_3g05920

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G05920	BRADI3G05920.1	BRADI3G05920.1
BRADI3G05920	BRADI3G05920.5	BRADI3G05920.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	5.50e-24	84.1	146	186
ULD/UDP/UBQ/UBQ_PIM	2.30e-21	76.1	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMG...FdreealqaLraannnleaAveyLldg 41
             +++q++eMG   +dr+++++aLraa+nn+e+Av+yL++g
   Q: 146  DTMINQIMEMGggsWDRDKVQRALRAAYNNPERAVDYLYSG 186
           679***********************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mkltvktlkg++fe++v+++dt+ ++K++i++ +g   +p  qq LI+ GkiLkD++tL+e++++++  ++++++ksk
   Q: 1    MKLTVKTLKGTHFEIRVQQNDTIMAVKKNIEEIQGkdnYPWGQQLLIHTGKILKDESTLEENQVSEDGSLVVMLSKSK 78
           99*************************************************************************997 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MKLTVKTLKG THFEIRVQQN DTIMAVKKNI EEIQGKDNYP WGQQLLIHTG KILKDESTLE 60
ENQVSEDGSL VVMLSKSKAS VSSGASSAQP SSIPVTRQAP PDAQIQAAES SVPPTTTSQP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGAACCCCG ATTCCCCGGC CGGGACCGCC GCGACGACCG CCATGAAGCT GACGGTGAAG 60
ACCCTCAAGG GCACCCACTT CGAGATCCGG GTGCAGCAGA ATGACACCGT GAGATCCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100823267

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000088	Aegilops tauschii	76.98	3.00e-127	447.00
IUUC-Atr-002756	Amborella trichopoda	65.51	1.00e-111	395.00
IUUC-Aca-004704	Anolis carolinensis	32.47	3.00e-35	141.00
IUUC-Aly-006159	Arabidopsis lyrata	64.05	2.00e-114	404.00
IUUC-Acl-008212	Aspergillus clavatus	37.16	3.00e-28	118.00
IUUC-Afu-008877	Aspergillus fumigatus	40.16	2.00e-29	122.00
IUUC-Ate-010458	Aspergillus terreus	39.29	7.00e-33	133.00
IUUC-Ame-011342	Astyanax mexicanus	33.06	4.00e-32	131.00
IUUC-Bol-016300	Brassica oleracea	59.46	3.00e-104	370.00
IUUC-Bra-016970	Brassica rapa	63.24	4.00e-110	390.00
IUUC-Cel-018364	Caenorhabditis elegans	26.22	1.00e-15	76.30
IUUC-Cja-018772	Callithrix jacchus	34.91	5.00e-27	114.00
IUUC-Cfa-020683	Canis familiaris	34.55	1.00e-24	107.00
IUUC-Cpo-022145	Cavia porcellus	36.10	2.00e-27	116.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	37.80	4.00e-19	88.20
IUUC-Cin-025741	Ciona intestinalis	27.43	8.00e-20	90.10
IUUC-Csv-025823	Ciona savignyi	28.08	9.00e-26	109.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	46.08	7.00e-17	80.50
IUUC-Dno-029543	Dasypus novemcinctus	33.57	9.00e-28	117.00
IUUC-Dse-031336	Dothistroma septosporum	47.93	2.00e-19	89.40
IUUC-Ete-032583	Echinops telfairi	34.78	8.00e-17	80.50
IUUC-Fox-037960	Fusarium oxysporum	49.61	1.00e-21	96.70
IUUC-Fso-038107	Fusarium solani	48.06	5.00e-21	94.40
IUUC-Ggr-040116	Gaeumannomyces graminis	49.62	6.00e-23	100.00
IUUC-Gga-040133	Gallus gallus	37.13	2.00e-23	102.00
IUUC-Gac-042239	Gasterosteus aculeatus	33.17	4.00e-42	164.00
IUUC-Gma-044245	Glycine max	64.89	6.00e-123	432.00
IUUC-Hvu-047738	Hordeum vulgare	85.66	1.00e-109	388.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	35.63	5.00e-25	107.00
IUUC-Lpe-051168	Leersia perrieri	72.01	6.00e-139	485.00
IUUC-Lma-053328	Leptosphaeria maculans	38.16	1.00e-08	50.10
IUUC-Laf-054589	Loxodonta africana	32.31	4.00e-41	160.00
IUUC-Meu-056459	Macropus eugenii	37.30	3.00e-32	131.00
IUUC-Mor-057287	Magnaporthe oryzae	50.42	4.00e-19	88.20
IUUC-Mpo-057609	Magnaporthe poae	49.21	6.00e-21	94.00
IUUC-Mtr-058239	Medicago truncatula	62.90	4.00e-111	393.00
IUUC-Mla-058961	Melampsora laricipopulina	45.04	7.00e-26	110.00
IUUC-Mac-064468	Musa acuminata	65.23	5.00e-125	439.00
IUUC-Mpu-066684	Mustela putorius furo	32.22	6.00e-41	160.00
IUUC-Mlu-067787	Myotis lucifugus	32.82	2.00e-41	162.00
IUUC-Nfi-068390	Neosartorya fischeri	40.16	3.00e-29	121.00
IUUC-Ont-072484	Oreochromis niloticus	33.18	4.00e-45	174.00
IUUC-Oan-073572	Ornithorhynchus anatinus	32.39	4.00e-40	157.00
IUUC-Ocu-074831	Oryctolagus cuniculus	33.70	4.00e-26	111.00
IUUC-Oba-074972	Oryza barthii	72.28	8.00e-140	488.00
IUUC-Obr-076909	Oryza brachyantha	79.30	4.00e-149	520.00
IUUC-Ogl-077067	Oryza glaberrima	77.84	3.00e-154	536.00
IUUC-Ogu-078023	Oryza glumaepatula	78.31	5.00e-134	469.00
IUUC-Oin-079203	Oryza indica	79.13	2.00e-155	540.00
IUUC-Olo-080559	Oryza longistaminata	74.80	3.00e-145	506.00
IUUC-Oni-082812	Oryza nivara	72.01	1.00e-139	488.00
IUUC-Opu-083963	Oryza punctata	72.63	2.00e-134	471.00
IUUC-Oru-084942	Oryza rufipogon	71.10	6.00e-128	449.00
IUUC-Osa-085951	Oryza sativa	79.40	2.00e-155	540.00
IUUC-Ola-086540	Oryzias latipes	35.27	5.00e-29	121.00
IUUC-Pno-095064	Phaeosphaeria nodorum	45.95	4.00e-13	68.20
IUUC-Pop-100054	Populus trichocarpa	62.20	1.00e-108	385.00
IUUC-Ppe-101522	Prunus persica	63.81	6.00e-118	416.00
IUUC-Pva-102412	Pteropus vampyrus	32.22	4.00e-41	160.00
IUUC-Sce-106214	Saccharomyces cerevisiae	31.11	7.00e-13	67.40
IUUC-Ssl-108382	Sclerotinia sclerotiorum	43.93	2.00e-18	85.90
IUUC-Smo-109518	Selaginella moellendorffii	52.88	5.00e-80	290.00
IUUC-Sit-109813	Setaria italica	77.84	3.00e-143	500.00
IUUC-Sly-111349	Solanum lycopersicum	65.43	2.00e-119	421.00
IUUC-Stu-112306	Solanum tuberosum	64.86	3.00e-112	397.00
IUUC-Sar-112925	Sorex araneus	32.97	2.00e-24	105.00
IUUC-Sbi-114459	Sorghum bicolor	80.76	9.00e-151	525.00
IUUC-Tru-118651	Takifugu rubripes	30.17	2.00e-40	159.00
IUUC-Tca-121594	Theobroma cacao	62.73	2.00e-114	404.00
IUUC-Tvi-122617	Trichoderma virens	34.63	2.00e-34	139.00
IUUC-Tae-123231	Triticum aestivum	89.95	7.00e-161	558.00
IUUC-Tur-126144	Triticum urartu	74.02	3.00e-144	504.00
IUUC-Vda-129946	Verticillium dahliae	48.85	1.00e-22	99.80
IUUC-Vpa-130357	Vicugna pacos	33.33	2.00e-11	62.40
IUUC-Zma-135929	Zea mays	79.67	2.00e-152	531.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence