iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-111976

Ensembl Protein ID

PGSC0003DMT400073254

UniProt Accession

M1CRP1; M1CRP1_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400028462	PGSC0003DMT400073254	PGSC0003DMT400073254

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.60e-31	108.8	296	368

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +vp++f+CpIsl+lMrdPv++++G+tydr+ I +w+++g+ tcP+t+q l+++ lvPn +lr+li +wc++++
   Q: 296  SVPKDFCCPISLDLMRDPVIVATGQTYDRAPISRWMEEGHCTCPKTGQLLDHTRLVPNRALRNLIMHWCAARK 368
           59*******************************************************************9876 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MASAAIFSSL RRQRSPTLEA FLAPVDLTDV GLLQTLTALS SELISAYSGK KLPFYQRKNC 60
KSLLRKIQVF SVLLECLLEN NKNRSRGSSD LPFTAFLCFK ELYLLLYRSK ILLDYCSHSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACCCATTTC GTTCTTGGTC TTAAATTCAA ACCTTTCTTG ATAGTTTTTT TCCAGAAAGG 60
TAGAATCTTG GTGTTGTTTT TACAGTTTTT TGGTATACCC ATATAGAAAT CTCACTGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001129	Aegilops tauschii	49.01	1.00e-135	475.00
IUUC-Aly-006027	Arabidopsis lyrata	67.83	0.00e+00	871.00
IUUC-Ath-007054	Arabidopsis thaliana	66.90	0.00e+00	857.00
IUUC-Bdi-014675	Brachypodium distachyon	46.42	3.00e-139	487.00
IUUC-Bol-015991	Brassica oleracea	65.07	0.00e+00	779.00
IUUC-Bra-017296	Brassica rapa	65.80	0.00e+00	785.00
IUUC-Gma-043020	Glycine max	75.87	0.00e+00	1002.00
IUUC-Hvu-047822	Hordeum vulgare	46.88	2.00e-149	521.00
IUUC-Lch-050386	Latimeria chalumnae	38.96	1.00e-10	60.10
IUUC-Lpe-051105	Leersia perrieri	48.74	2.00e-143	501.00
IUUC-Mtr-057764	Medicago truncatula	73.34	0.00e+00	958.00
IUUC-Mac-065609	Musa acuminata	47.69	2.00e-164	571.00
IUUC-Oba-075480	Oryza barthii	51.59	9.00e-142	495.00
IUUC-Obr-076773	Oryza brachyantha	55.08	2.00e-89	320.00
IUUC-Ogl-077156	Oryza glaberrima	48.42	7.00e-152	530.00
IUUC-Ogu-078640	Oryza glumaepatula	48.42	3.00e-152	531.00
IUUC-Oin-079253	Oryza indica	46.21	3.00e-139	488.00
IUUC-Olo-080903	Oryza longistaminata	51.31	2.00e-141	494.00
IUUC-Ome-081982	Oryza meridionalis	47.96	6.00e-151	526.00
IUUC-Oni-082824	Oryza nivara	48.42	3.00e-152	531.00
IUUC-Opu-083758	Oryza punctata	48.26	9.00e-150	522.00
IUUC-Oru-084718	Oryza rufipogon	48.42	3.00e-152	531.00
IUUC-Osa-085662	Oryza sativa	49.57	1.00e-145	508.00
IUUC-Pop-099239	Populus trichocarpa	74.75	0.00e+00	941.00
IUUC-Ppe-101890	Prunus persica	74.52	0.00e+00	922.00
IUUC-Sit-110022	Setaria italica	48.82	2.00e-148	518.00
IUUC-Sly-111463	Solanum lycopersicum	98.07	0.00e+00	1322.00
IUUC-Sbi-114100	Sorghum bicolor	48.58	5.00e-150	523.00
IUUC-Tca-121221	Theobroma cacao	75.14	0.00e+00	993.00
IUUC-Tae-124437	Triticum aestivum	47.04	8.00e-150	523.00
IUUC-Tur-126627	Triticum urartu	50.98	5.00e-131	459.00
IUUC-Vvi-131159	Vitis vinifera	71.47	0.00e+00	881.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence