iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121221

Ensembl Protein ID

EOY27921

UniProt Accession

A0A061GEA7; A0A061GEA7_THECC

Genbank Protein ID

EOY27921.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001884

Gene Name

TCM_029635

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_029635	EOY27921	EOY27921

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.40e-32	111.7	292	364

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpIsl+lMrdPv++++G+tydrssI +w+++g+ tcP+t+q l ++ lvPn +lr+li +wc ++++
   Q: 292  IPKDFCCPISLDLMRDPVIISTGQTYDRSSITRWMEEGHCTCPKTGQMLIHTRLVPNRALRNLIIQWCTAHGI 364
           8********************************************************************9986 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MATAAIFSSL RRRRSPSLEA FLAPVDLTEV TLVQTLAAIS SELVSSFSNN VFFFQRRNSR 60
SLVRKIEIFV VFLEYLRDSG SGSMSSLPST AILCFKELYL LLYRSKIVLD YCAQSSKLWL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGAGTAGA AGAAAAGAGA AACGAAACGA ATGGACAGGA ATCTGGATAA TTATCCGTCA 60
AAGCCATACA AGTCATTTTC ACAGCAGCTG CATTGAACTT CCTAGAGAGA GAAAGCCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001129	Aegilops tauschii	50.62	9.00e-143	499.00
IUUC-Aly-006027	Arabidopsis lyrata	74.75	0.00e+00	977.00
IUUC-Ath-007054	Arabidopsis thaliana	73.19	0.00e+00	964.00
IUUC-Bdi-014675	Brachypodium distachyon	48.51	7.00e-151	526.00
IUUC-Bol-015901	Brassica oleracea	73.19	0.00e+00	889.00
IUUC-Bra-017296	Brassica rapa	72.32	0.00e+00	872.00
IUUC-Gma-043020	Glycine max	80.17	0.00e+00	1038.00
IUUC-Hvu-047822	Hordeum vulgare	48.37	1.00e-157	549.00
IUUC-Lch-050386	Latimeria chalumnae	38.81	6.00e-11	61.20
IUUC-Lpe-051105	Leersia perrieri	49.05	3.00e-150	525.00
IUUC-Mtr-057764	Medicago truncatula	79.15	0.00e+00	1017.00
IUUC-Mac-065609	Musa acuminata	53.17	1.00e-178	619.00
IUUC-Oba-075480	Oryza barthii	52.06	8.00e-145	506.00
IUUC-Obr-076773	Oryza brachyantha	54.61	1.00e-89	322.00
IUUC-Ogl-077156	Oryza glaberrima	49.05	1.00e-156	546.00
IUUC-Ogu-078640	Oryza glumaepatula	49.05	4.00e-157	547.00
IUUC-Oin-079253	Oryza indica	46.99	7.00e-145	506.00
IUUC-Olo-080903	Oryza longistaminata	52.06	6.00e-145	506.00
IUUC-Ome-081982	Oryza meridionalis	48.99	8.00e-156	543.00
IUUC-Oni-082824	Oryza nivara	49.05	4.00e-157	547.00
IUUC-Opu-083758	Oryza punctata	48.83	2.00e-154	538.00
IUUC-Oru-084718	Oryza rufipogon	49.05	4.00e-157	547.00
IUUC-Osa-085662	Oryza sativa	50.26	4.00e-150	523.00
IUUC-Pop-099239	Populus trichocarpa	82.74	0.00e+00	1056.00
IUUC-Ppe-101890	Prunus persica	82.66	0.00e+00	1016.00
IUUC-Sit-110022	Setaria italica	50.39	4.00e-158	551.00
IUUC-Sly-111463	Solanum lycopersicum	76.55	0.00e+00	991.00
IUUC-Stu-111976	Solanum tuberosum	75.97	0.00e+00	984.00
IUUC-Sbi-114100	Sorghum bicolor	49.85	3.00e-158	551.00
IUUC-Tae-124437	Triticum aestivum	48.84	1.00e-158	552.00
IUUC-Tur-126627	Triticum urartu	52.53	4.00e-137	480.00
IUUC-Vvi-131159	Vitis vinifera	77.13	0.00e+00	978.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence