iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131686

Ensembl Protein ID

VIT_13s0074g00010.t01

UniProt Accession

D7UBR9; D7UBR9_VITVI

Genbank Protein ID

CBI40184.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596753

Gene Name

PHF1; VIT_13s0074g00010

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_13s0074g00010	VIT_13s0074g00010.t01	VIT_13s0074g00010.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-07	32.1	112	143

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           ++++f  d  +l+s s Dg+ ++W + +gv+l
   Q: 112  RDMDFsLDtEFLASTSTDGSARIWKINDGVPL 143
           67788855599***************999986 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MTTSLSSSPL ATYVLEEGDP MAVAVHPSGD ELVCSTTTGD CKLFELYAQE GNIKLLAKKL 60
NALEGVGPQK CLAFSVEGSR FATGGVDGHL RILEWPSMQI ILDEPRAHNS FRDMDFSLDT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCATCAGACA TAACATTGGT TCGGGTGGTT GACCCAAGTG AGTCCAACCT GAACCGGTTC 60
AAACTGCCGT CCAGGCGGTA TAAGAAGCAG CTCCACAGTT ACAAGAGAGC CGCGGAATCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:0005886--C:plasma membrane
GO:0005096--F:GTPase activator activity
GO:0051020--F:GTPase binding
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0016036--P:cellular response to phosphate starvation
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006817--P:phosphate ion transport
GO:0009306--P:protein secretion
GO:0003400--P:regulation of COPII vesicle coating

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000155	Aegilops tauschii	63.02	4.00e-107	380.00
IUUC-Atr-002477	Amborella trichopoda	70.00	2.00e-138	484.00
IUUC-Bdi-014908	Brachypodium distachyon	60.33	1.00e-108	385.00
IUUC-Cel-018480	Caenorhabditis elegans	26.29	2.00e-09	55.80
IUUC-Gma-042654	Glycine max	77.08	5.00e-160	556.00
IUUC-Mtr-058623	Medicago truncatula	73.56	2.00e-156	543.00
IUUC-Oba-075552	Oryza barthii	63.39	3.00e-130	457.00
IUUC-Ogl-077345	Oryza glaberrima	63.39	3.00e-130	457.00
IUUC-Ogu-078334	Oryza glumaepatula	63.39	3.00e-130	457.00
IUUC-Oin-079600	Oryza indica	62.99	8.00e-130	455.00
IUUC-Olo-080918	Oryza longistaminata	63.69	2.00e-130	457.00
IUUC-Ome-081986	Oryza meridionalis	63.69	2.00e-130	457.00
IUUC-Oni-082430	Oryza nivara	62.60	5.00e-98	349.00
IUUC-Opu-083902	Oryza punctata	61.07	1.00e-110	391.00
IUUC-Oru-084937	Oryza rufipogon	64.68	6.00e-98	349.00
IUUC-Osa-085881	Oryza sativa	62.99	8.00e-130	455.00
IUUC-Ppa-095904	Physcomitrella patens	42.72	3.00e-64	238.00
IUUC-Pop-099307	Populus trichocarpa	76.66	3.00e-148	516.00
IUUC-Ppe-101362	Prunus persica	81.25	8.00e-160	555.00
IUUC-Smo-108754	Selaginella moellendorffii	48.55	3.00e-73	267.00
IUUC-Sly-110920	Solanum lycopersicum	69.32	9.00e-131	459.00
IUUC-Stu-112065	Solanum tuberosum	68.44	2.00e-129	454.00
IUUC-Tca-121608	Theobroma cacao	78.67	2.00e-159	554.00
IUUC-Tae-124657	Triticum aestivum	64.63	2.00e-112	397.00
IUUC-Tur-126597	Triticum urartu	63.33	8.00e-98	348.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence