iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO	FFGED
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
IID	HINT	Mentha
Post-translational Modifications (PTMs)
CPLM	dbPAF	dbPTM	UniProt
PHOSIDA	BioGRID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/CARD	25.96	6.50e-01	35.00	IUUC-Hsa-046093

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Saccharomyces cerevisiae

Functional Description
(View)

Present with 279 molecules/cell in log phase SD medium.

Protein Sequence
(Fasta)

MDSKDTQKLL KEHRIPCIDV GWLVRPSAST SKSSRPGKSE SKANSVAPDI QMDTARPPVF 60
ETSVDSSSSI LSSNDKGRRH SVAASLLMDN QRANAGSTSV PTNIPPPRGR SKSVVETNLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACTCCA AGGACACGCA AAAGTTGCTT AAGGAGCACC GAATCCCCTG CATCGACGTT 60
GGATGGTTGG TCAGGCCCAG TGCCTCCACC AGCAAGAGCT CCAGACCAGG GAAATCCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0007--Acetylation
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-1017--Isopeptide bond
KW-0493--Microtubule
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0832--Ubl conjugation

Interpro

IPR032675--L_dom-like

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005874--C:microtubule
GO:0005819--C:spindle
GO:0005200--F:structural constituent of cytoskeleton
GO:0031505--P:fungal-type cell wall organization
GO:0007026--P:negative regulation of microtubule depolymerization

KEGG

sce:YJL042W

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000270	Aegilops tauschii	25.00	8.60e-01	26.90
IUUC-Aml-001822	Ailuropoda melanoleuca	26.92	6.00e-04	38.10
IUUC-Apl-003908	Anas platyrhynchos	22.08	3.50e-01	28.90
IUUC-Ame-011021	Astyanax mexicanus	26.80	1.00e-03	36.60
IUUC-Bta-012962	Bos taurus	31.82	6.20e-01	26.90
IUUC-Bdi-014037	Brachypodium distachyon	27.18	2.40e-01	28.50
IUUC-Cja-019020	Callithrix jacchus	31.82	9.10e-01	26.90
IUUC-Cpo-021856	Cavia porcellus	31.82	1.50e+00	26.20
IUUC-Csa-023906	Chlorocebus sabaeus	25.96	3.00e-03	35.80
IUUC-Dno-028994	Dasypus novemcinctus	30.16	1.10e+00	26.90
IUUC-Dme-031624	Drosophila melanogaster	27.59	3.70e-01	27.30
IUUC-Eca-033730	Equus caballus	31.82	1.40e+00	26.60
IUUC-Eeu-034589	Erinaceus europaeus	25.41	6.00e-03	34.70
IUUC-Fca-036252	Felis catus	25.00	5.00e-03	35.00
IUUC-Fal-037418	Ficedula albicollis	25.00	3.00e-01	28.90
IUUC-Gga-040775	Gallus gallus	25.00	2.90e-01	28.90
IUUC-Ggo-044861	Gorilla gorilla	25.96	3.00e-03	35.80
IUUC-Hsa-046093	Homo sapiens	25.96	5.00e-03	35.00
IUUC-Itr-048804	Ictidomys tridecemlineatus	33.33	1.00e+00	26.90
IUUC-Kpa-049357	Komagataella pastoris	33.78	2.00e-76	278.00
IUUC-Lch-049960	Latimeria chalumnae	28.43	5.70e-02	30.80
IUUC-Lma-053168	Leptosphaeria maculans	29.58	8.10e-02	29.30
IUUC-Laf-054362	Loxodonta africana	31.82	2.20e+00	25.80
IUUC-Mcc-055772	Macaca mulatta	25.96	7.00e-03	34.70
IUUC-Mmr-060596	Microcebus murinus	25.00	2.00e-02	33.10
IUUC-Mmu-063358	Mus musculus	31.82	1.60e+00	26.20
IUUC-Mpu-066412	Mustela putorius furo	27.13	5.00e-05	41.60
IUUC-Mlu-067601	Myotis lucifugus	26.88	4.40e-02	32.00
IUUC-Nle-069913	Nomascus leucogenys	25.96	1.00e-03	37.40
IUUC-Ont-072512	Oreochromis niloticus	29.03	4.10e-02	32.00
IUUC-Oan-072790	Ornithorhynchus anatinus	24.53	7.90e-02	29.60
IUUC-Ocu-074837	Oryctolagus cuniculus	26.92	1.20e-02	33.90
IUUC-Obr-076380	Oryza brachyantha	28.12	7.80e-01	27.70
IUUC-Oga-088909	Otolemur garnettii	26.88	1.70e-02	33.10
IUUC-Ptr-090774	Pan troglodytes	31.82	1.00e+00	26.90
IUUC-Pan-092545	Papio anubis	25.96	3.00e-03	35.80
IUUC-Psi-093182	Pelodiscus sinensis	23.38	3.60e-01	28.50
IUUC-Pfo-096976	Poecilia formosa	26.47	2.00e-03	36.60
IUUC-Pab-098481	Pongo abelii	25.96	6.00e-03	34.70
IUUC-Pca-100417	Procavia capensis	28.00	2.30e-01	30.00
IUUC-Pva-102127	Pteropus vampyrus	25.96	4.00e-03	35.40
IUUC-Tgu-117179	Taeniopygia guttata	25.00	3.40e-01	28.90
IUUC-Tbe-127661	Tupaia belangeri	26.92	3.00e-03	35.80
IUUC-Ttr-128532	Tursiops truncatus	31.82	1.20e+00	26.60

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence