iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074831

Ensembl Protein ID

ENSOCUP00000006328.2

UniProt Accession

G1SST9; G1SST9_RABIT

Genbank Protein ID

ENSOCUP00000006328

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02033860

Gene Name

RAD23B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000007316.3	ENSOCUT00000007319.3	ENSOCUP00000006328.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.60e-19	69.4	189	226
ULD/UDP/UBQ/UBQ_PIM	2.30e-27	94.8	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e ++ ++++MG++re+++ aLra++nn+++AveyLl 
   Q: 189  YENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLM 226
           5789********************************95 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           m++t+ktl++++f++++++++tv++lKeki++e+g   +p++ qkLIyaGkiL+Ddt L+e++i+++++v+++v+k+k
   Q: 1    MQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGkdaFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKPK 78
           99*************************************************************************997 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MQVTLKTLQQ QTFKIDIDPE ETVKALKEKI ESEKGKDAFP VAGQKLIYAG KILNDDTALK 60
EYKIDEKNFV VVMVTKPKAV TTPAPATTQQ SNSATTTAVS SSTATAVTQA STPAPALAPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGGTCA CCCTGAAGAC CCTTCAGCAG CAGACCTTCA AGATCGACAT CGACCCCGAG 60
GAGACGGTAC GCGCGGCGGG GAGCGCGGGG GCGCCGGCGG CTGCGCGCGG GGCCGAGCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0071942--C:XPC complex
GO:0003684--F:damaged DNA binding
GO:0000715--P:nucleotide-excision repair, DNA damage recognition
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0007283--P:spermatogenesis

KEGG

ocu:100353489

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001195	Ailuropoda melanoleuca	87.82	4.00e-84	305.00
IUUC-Atr-003116	Amborella trichopoda	36.65	3.00e-30	125.00
IUUC-Apl-003371	Anas platyrhynchos	70.24	8.00e-115	406.00
IUUC-Aca-004599	Anolis carolinensis	74.88	9.00e-130	456.00
IUUC-Aly-006159	Arabidopsis lyrata	34.04	2.00e-55	209.00
IUUC-Ath-006674	Arabidopsis thaliana	36.58	6.00e-39	154.00
IUUC-Ago-007830	Ashbya gossypii	26.40	1.00e-16	80.50
IUUC-Acl-008212	Aspergillus clavatus	44.60	4.00e-19	89.00
IUUC-Afu-008877	Aspergillus fumigatus	43.88	1.00e-18	87.40
IUUC-Ani-009460	Aspergillus nidulans	41.13	1.00e-32	133.00
IUUC-Ate-010458	Aspergillus terreus	40.56	1.00e-28	120.00
IUUC-Ame-011107	Astyanax mexicanus	67.31	1.00e-33	137.00
IUUC-Bta-012922	Bos taurus	89.27	2.00e-126	445.00
IUUC-Bci-013933	Botrytis cinerea	34.50	3.00e-22	99.40
IUUC-Bdi-014355	Brachypodium distachyon	30.25	6.00e-46	177.00
IUUC-Cja-018772	Callithrix jacchus	89.51	5.00e-137	480.00
IUUC-Cfa-020683	Canis familiaris	87.53	7.00e-127	446.00
IUUC-Cpo-022145	Cavia porcellus	91.22	3.00e-133	468.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	36.70	1.00e-29	123.00
IUUC-Csa-023714	Chlorocebus sabaeus	92.93	2.00e-146	511.00
IUUC-Cho-024814	Choloepus hoffmanni	58.92	5.00e-93	334.00
IUUC-Cin-025741	Ciona intestinalis	41.10	4.00e-36	144.00
IUUC-Csv-025823	Ciona savignyi	39.74	7.00e-43	167.00
IUUC-Cne-027056	Cryptococcus neoformans	47.44	1.00e-15	77.00
IUUC-Cme-027260	Cyanidioschyzon merolae	26.65	2.00e-28	120.00
IUUC-Dre-028369	Danio rerio	73.36	9.00e-82	296.00
IUUC-Dno-029543	Dasypus novemcinctus	88.75	3.00e-136	478.00
IUUC-Dse-031336	Dothistroma septosporum	47.06	1.00e-17	84.00
IUUC-Dme-032027	Drosophila melanogaster	37.64	3.00e-63	235.00
IUUC-Ete-032583	Echinops telfairi	81.78	4.00e-65	241.00
IUUC-Eca-034243	Equus caballus	92.80	8.00e-90	323.00
IUUC-Eeu-034721	Erinaceus europaeus	85.85	7.00e-69	254.00
IUUC-Fca-035679	Felis catus	88.78	9.00e-130	456.00
IUUC-Fal-037148	Ficedula albicollis	71.11	9.00e-115	406.00
IUUC-Fox-037960	Fusarium oxysporum	42.96	7.00e-16	78.20
IUUC-Ggr-040116	Gaeumannomyces graminis	45.93	3.00e-16	79.30
IUUC-Gga-040544	Gallus gallus	72.38	1.00e-119	422.00
IUUC-Gac-042239	Gasterosteus aculeatus	55.82	2.00e-99	355.00
IUUC-Gma-044245	Glycine max	34.99	2.00e-57	215.00
IUUC-Ggo-045125	Gorilla gorilla	94.12	1.00e-93	336.00
IUUC-Hsa-046519	Homo sapiens	94.12	1.00e-93	336.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	90.73	1.00e-128	452.00
IUUC-Kpa-049314	Komagataella pastoris	37.08	8.00e-29	120.00
IUUC-Lch-050553	Latimeria chalumnae	67.83	6.00e-102	364.00
IUUC-Lpe-051168	Leersia perrieri	37.24	1.00e-35	143.00
IUUC-Loc-051748	Lepisosteus oculatus	74.15	3.00e-74	272.00
IUUC-Lma-053328	Leptosphaeria maculans	48.68	1.00e-13	67.40
IUUC-Laf-054293	Loxodonta africana	90.21	2.00e-119	422.00
IUUC-Mcc-055600	Macaca mulatta	94.01	9.00e-100	356.00
IUUC-Meu-056082	Macropus eugenii	66.30	3.00e-69	255.00
IUUC-Mor-057287	Magnaporthe oryzae	50.00	2.00e-16	80.10
IUUC-Mpo-057609	Magnaporthe poae	46.15	2.00e-15	76.60
IUUC-Mtr-058148	Medicago truncatula	39.23	1.00e-39	157.00
IUUC-Mla-058961	Melampsora laricipopulina	46.27	2.00e-24	107.00
IUUC-Mga-060060	Meleagris gallopavo	42.99	2.00e-27	116.00
IUUC-Mvi-060220	Microbotryum violaceum	43.61	4.00e-22	99.40
IUUC-Mmr-061159	Microcebus murinus	97.06	8.00e-95	340.00
IUUC-Mdo-061967	Monodelphis domestica	81.60	1.00e-121	429.00
IUUC-Mmu-063258	Mus musculus	85.85	1.00e-138	486.00
IUUC-Mpu-066389	Mustela putorius furo	88.66	2.00e-85	308.00
IUUC-Mlu-067999	Myotis lucifugus	80.46	2.00e-114	405.00
IUUC-Nfi-068390	Neosartorya fischeri	43.88	1.00e-18	87.40
IUUC-Nle-069655	Nomascus leucogenys	90.24	3.00e-139	488.00
IUUC-Opr-070234	Ochotona princeps	69.14	1.00e-28	120.00
IUUC-Ont-072484	Oreochromis niloticus	57.76	1.00e-102	366.00
IUUC-Oan-073572	Ornithorhynchus anatinus	55.05	3.00e-94	338.00
IUUC-Oba-074972	Oryza barthii	37.34	3.00e-36	145.00
IUUC-Obr-076909	Oryza brachyantha	37.70	4.00e-37	148.00
IUUC-Ogl-077067	Oryza glaberrima	33.73	2.00e-53	202.00
IUUC-Oin-079203	Oryza indica	33.81	2.00e-53	202.00
IUUC-Olo-080559	Oryza longistaminata	32.24	3.00e-47	182.00
IUUC-Oni-082812	Oryza nivara	37.76	3.00e-36	145.00
IUUC-Opu-083963	Oryza punctata	37.76	4.00e-36	145.00
IUUC-Oru-084942	Oryza rufipogon	31.98	1.00e-40	160.00
IUUC-Osa-085951	Oryza sativa	33.81	2.00e-53	202.00
IUUC-Ola-086540	Oryzias latipes	61.94	3.00e-64	238.00
IUUC-Olu-087843	Ostreococcus lucimarinus	41.48	5.00e-38	151.00
IUUC-Oga-088023	Otolemur garnettii	86.44	8.00e-135	473.00
IUUC-Oar-089964	Ovis aries	89.43	5.00e-113	400.00
IUUC-Ptr-091165	Pan troglodytes	94.12	2.00e-93	335.00
IUUC-Pan-092009	Papio anubis	90.07	5.00e-139	487.00
IUUC-Psi-093477	Pelodiscus sinensis	76.77	5.00e-105	374.00
IUUC-Ppa-095964	Physcomitrella patens	43.28	1.00e-27	117.00
IUUC-Pfo-097385	Poecilia formosa	58.25	4.00e-101	361.00
IUUC-Pab-097868	Pongo abelii	94.12	7.00e-93	333.00
IUUC-Pop-099774	Populus trichocarpa	34.88	2.00e-34	139.00
IUUC-Pca-100652	Procavia capensis	87.56	2.00e-66	245.00
IUUC-Pva-102137	Pteropus vampyrus	92.86	1.00e-91	330.00
IUUC-Ptt-103717	Puccinia triticina	43.38	2.00e-25	109.00
IUUC-Pte-104303	Pyrenophora teres	49.64	4.00e-20	92.00
IUUC-Pyt-104580	Pyrenophora triticirepentis	49.64	6.00e-20	91.70
IUUC-Rno-104844	Rattus norvegicus	86.06	9.00e-141	493.00
IUUC-Sce-106214	Saccharomyces cerevisiae	35.77	4.00e-13	68.90
IUUC-Sha-107073	Sarcophilus harrisii	82.35	8.00e-109	387.00
IUUC-Spo-108298	Schizosaccharomyces pombe	41.39	2.00e-36	146.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	43.36	3.00e-17	82.40
IUUC-Smo-109129	Selaginella moellendorffii	44.29	2.00e-20	93.20
IUUC-Sit-109813	Setaria italica	30.56	2.00e-49	189.00
IUUC-Sly-111480	Solanum lycopersicum	36.49	6.00e-57	214.00
IUUC-Stu-112054	Solanum tuberosum	36.07	2.00e-54	206.00
IUUC-Sar-112925	Sorex araneus	74.42	6.00e-102	363.00
IUUC-Sbi-114459	Sorghum bicolor	33.46	1.00e-36	147.00
IUUC-Sre-114894	Sporisorium reilianum	50.00	1.00e-10	60.80
IUUC-Ssc-116329	Sus scrofa	91.46	2.00e-132	465.00
IUUC-Tgu-116918	Taeniopygia guttata	74.63	1.00e-127	449.00
IUUC-Tru-118651	Takifugu rubripes	64.44	2.00e-73	269.00
IUUC-Tsy-118836	Tarsius syrichta	95.62	9.00e-48	184.00
IUUC-Tni-120493	Tetraodon nigroviridis	61.97	2.00e-69	256.00
IUUC-Tca-121594	Theobroma cacao	38.25	1.00e-37	150.00
IUUC-Tae-125620	Triticum aestivum	35.51	7.00e-36	144.00
IUUC-Tme-127092	Tuber melanosporum	39.57	1.00e-27	117.00
IUUC-Tbe-127493	Tupaia belangeri	78.60	9.00e-68	250.00
IUUC-Ttr-128464	Tursiops truncatus	85.90	8.00e-117	413.00
IUUC-Uma-129484	Ustilago maydis	47.54	1.00e-11	64.30
IUUC-Vda-129946	Verticillium dahliae	33.77	9.00e-24	104.00
IUUC-Vpa-130357	Vicugna pacos	84.05	5.00e-86	310.00
IUUC-Vvi-131039	Vitis vinifera	37.35	1.00e-39	156.00
IUUC-Xtr-132679	Xenopus tropicalis	71.15	3.00e-107	381.00
IUUC-Xma-133503	Xiphophorus maculatus	55.58	4.00e-104	370.00
IUUC-Yli-134615	Yarrowia lipolytica	41.82	8.00e-36	144.00
IUUC-Zma-135929	Zea mays	30.72	9.00e-52	197.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence