iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0009s16750	POPTR_0009s16750.1	POPTR_0009s16750.1
POPTR_0009s16750	POPTR_0009s16750.2	POPTR_0009s16750.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	7.90e-08	33.3	522	556
ULD/UDP/UBQ/UBQ_PIM	6.20e-22	78.4	26	96

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 6    kleqlveMGF.dreealqaLraannnleaAveyLl 39
           +l ql+eMGF d++e+++aLra+ +n+ aAve+Ll
   Q: 522  QLSQLQEMGFfDTQENIRALRATAGNVHAAVERLL 556
           799******99***********************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 2    kltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvk 72
            +++++++g++f+++ s ++tv  +K ++a++++vpp+qq+LIy+G+iLkDd  L ++g++ ++++h+v  
   Q: 26   VINIRCSNGTKFTVRTSLESTVGVFKSLLAQNCDVPPDQQRLIYKGRILKDDLALHSYGLQADHTIHMVRG 96
           689*****************************************************************975 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGAAGDSSES KVINEQQGQG EEGAVVINIR CSNGTKFTVR TSLESTVGVF KSLLAQNCDV 60
PPDQQRLIYK GRILKDDLAL HSYGLQADHT IHMVRGFSPA PSAPAHAPVA AANPENPDTT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAAAAAAAC CCCATAAAAA CTCGAAACCC TCGATCGCCC TATCTCTCTC TCTGCCCTTC 60
CCAATTTTTA CTTTGATTTC AATTACTCTG ATTTCCAATT CCTCTTTGAT TTCTCTTACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR015496--Ubiquilin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001461	Ailuropoda melanoleuca	39.51	6.00e-48	184.00
IUUC-Atr-002470	Amborella trichopoda	66.58	5.00e-124	437.00
IUUC-Apl-003241	Anas platyrhynchos	37.96	3.00e-45	176.00
IUUC-Aca-004511	Anolis carolinensis	37.85	1.00e-47	183.00
IUUC-Aly-005736	Arabidopsis lyrata	64.91	1.00e-166	579.00
IUUC-Ath-007271	Arabidopsis thaliana	62.54	2.00e-165	575.00
IUUC-Acl-008361	Aspergillus clavatus	28.09	1.00e-15	77.40
IUUC-Afl-008403	Aspergillus flavus	29.24	2.00e-16	79.70
IUUC-Aor-010091	Aspergillus oryzae	29.24	2.00e-16	79.70
IUUC-Ate-010419	Aspergillus terreus	29.54	2.00e-16	79.30
IUUC-Ame-011329	Astyanax mexicanus	34.36	2.00e-55	209.00
IUUC-Bta-013048	Bos taurus	35.45	1.00e-53	204.00
IUUC-Bdi-014506	Brachypodium distachyon	65.65	1.00e-132	466.00
IUUC-Bra-016907	Brassica rapa	62.48	1.00e-157	548.00
IUUC-Cel-018631	Caenorhabditis elegans	33.17	4.00e-45	175.00
IUUC-Cja-019976	Callithrix jacchus	36.06	2.00e-54	206.00
IUUC-Cfa-020092	Canis familiaris	35.56	8.00e-55	207.00
IUUC-Cpo-022388	Cavia porcellus	35.48	7.00e-54	204.00
IUUC-Csa-024087	Chlorocebus sabaeus	35.41	5.00e-53	201.00
IUUC-Cho-024834	Choloepus hoffmanni	36.28	8.00e-55	207.00
IUUC-Cin-025136	Ciona intestinalis	42.04	2.00e-43	169.00
IUUC-Csv-026009	Ciona savignyi	38.58	2.00e-39	156.00
IUUC-Cgl-026590	Colletotrichum gloeosporioides	32.05	3.00e-09	55.80
IUUC-Dre-028009	Danio rerio	39.10	1.00e-47	184.00
IUUC-Dor-030519	Dipodomys ordii	35.32	3.00e-51	195.00
IUUC-Dme-032013	Drosophila melanogaster	31.64	7.00e-53	201.00
IUUC-Ete-032273	Echinops telfairi	35.14	7.00e-55	207.00
IUUC-Eca-033667	Equus caballus	34.68	4.00e-51	195.00
IUUC-Fca-036179	Felis catus	34.65	3.00e-51	196.00
IUUC-Fal-037642	Ficedula albicollis	33.78	4.00e-53	201.00
IUUC-Fox-037726	Fusarium oxysporum	27.65	3.00e-11	62.80
IUUC-Gmo-039317	Gadus morhua	35.36	6.00e-52	197.00
IUUC-Gac-041826	Gasterosteus aculeatus	35.44	2.00e-52	199.00
IUUC-Ggo-044969	Gorilla gorilla	34.96	5.00e-51	195.00
IUUC-Hsa-046669	Homo sapiens	35.62	1.00e-54	206.00
IUUC-Itr-048337	Ictidomys tridecemlineatus	35.53	5.00e-54	204.00
IUUC-Lch-050192	Latimeria chalumnae	40.19	1.00e-50	193.00
IUUC-Lpe-050974	Leersia perrieri	53.42	9.00e-125	439.00
IUUC-Loc-052846	Lepisosteus oculatus	39.94	2.00e-46	180.00
IUUC-Lma-053152	Leptosphaeria maculans	28.05	3.00e-17	82.80
IUUC-Laf-054278	Loxodonta africana	34.68	1.00e-51	196.00
IUUC-Mcc-055680	Macaca mulatta	35.84	1.00e-54	206.00
IUUC-Meu-056843	Macropus eugenii	36.58	2.00e-39	156.00
IUUC-Mmr-061094	Microcebus murinus	35.36	8.00e-55	207.00
IUUC-Mdo-061917	Monodelphis domestica	37.16	1.00e-41	163.00
IUUC-Mmu-063397	Mus musculus	52.89	2.00e-35	143.00
IUUC-Mpu-066282	Mustela putorius furo	39.82	7.00e-48	184.00
IUUC-Mlu-068158	Myotis lucifugus	35.07	5.00e-54	205.00
IUUC-Ncr-068732	Neurospora crassa	31.05	7.00e-13	67.80
IUUC-Nle-069321	Nomascus leucogenys	35.62	1.00e-54	206.00
IUUC-Opr-071098	Ochotona princeps	40.06	1.00e-47	183.00
IUUC-Ont-072038	Oreochromis niloticus	36.51	8.00e-53	201.00
IUUC-Oan-072808	Ornithorhynchus anatinus	35.96	4.00e-56	211.00
IUUC-Ocu-074301	Oryctolagus cuniculus	31.78	9.00e-57	214.00
IUUC-Oba-075114	Oryza barthii	63.69	9.00e-94	337.00
IUUC-Ogl-077147	Oryza glaberrima	63.69	9.00e-94	337.00
IUUC-Ogu-078322	Oryza glumaepatula	63.38	1.00e-93	336.00
IUUC-Oin-080117	Oryza indica	63.38	2.00e-93	335.00
IUUC-Olo-080375	Oryza longistaminata	72.45	2.00e-63	236.00
IUUC-Oni-082060	Oryza nivara	63.38	2.00e-93	335.00
IUUC-Opu-083339	Oryza punctata	58.86	6.00e-78	284.00
IUUC-Oru-084808	Oryza rufipogon	63.38	2.00e-93	335.00
IUUC-Osa-085932	Oryza sativa	63.38	2.00e-93	335.00
IUUC-Ola-086802	Oryzias latipes	34.06	3.00e-49	189.00
IUUC-Oga-088495	Otolemur garnettii	38.94	7.00e-48	184.00
IUUC-Oar-089711	Ovis aries	34.97	9.00e-54	204.00
IUUC-Ptr-091439	Pan troglodytes	35.62	7.00e-53	201.00
IUUC-Pan-092641	Papio anubis	35.84	1.00e-54	206.00
IUUC-Psi-093518	Pelodiscus sinensis	36.73	5.00e-43	168.00
IUUC-Pno-094908	Phaeosphaeria nodorum	29.25	8.00e-14	70.50
IUUC-Pfo-096638	Poecilia formosa	32.05	1.00e-55	210.00
IUUC-Pab-098699	Pongo abelii	35.68	6.00e-56	211.00
IUUC-Pca-100194	Procavia capensis	40.74	2.00e-30	126.00
IUUC-Ppe-101901	Prunus persica	71.33	0.00e+00	682.00
IUUC-Pgr-103261	Puccinia graminis	26.98	2.00e-12	66.20
IUUC-Ptt-103817	Puccinia triticina	27.23	3.00e-11	62.00
IUUC-Rno-105804	Rattus norvegicus	52.89	2.00e-35	143.00
IUUC-Sce-106332	Saccharomyces cerevisiae	27.59	3.00e-14	72.40
IUUC-Sha-106881	Sarcophilus harrisii	34.32	3.00e-50	192.00
IUUC-Sar-113648	Sorex araneus	37.08	3.00e-36	145.00
IUUC-Sre-115081	Sporisorium reilianum	45.33	2.00e-13	69.70
IUUC-Ssc-115820	Sus scrofa	35.62	3.00e-54	206.00
IUUC-Tgu-116845	Taeniopygia guttata	36.42	5.00e-45	175.00
IUUC-Tru-118652	Takifugu rubripes	34.59	9.00e-51	194.00
IUUC-Tni-119780	Tetraodon nigroviridis	35.50	7.00e-50	191.00
IUUC-Tae-125598	Triticum aestivum	58.78	8.00e-86	310.00
IUUC-Tur-126783	Triticum urartu	59.08	1.00e-92	333.00
IUUC-Ttr-128630	Tursiops truncatus	34.73	7.00e-53	201.00
IUUC-Uma-129639	Ustilago maydis	45.33	2.00e-13	69.70
IUUC-Vda-129991	Verticillium dahliae	27.66	2.00e-13	69.70
IUUC-Vvi-131599	Vitis vinifera	69.84	2.00e-179	621.00
IUUC-Xtr-132978	Xenopus tropicalis	36.79	8.00e-43	167.00
IUUC-Xma-134155	Xiphophorus maculatus	30.60	9.00e-45	174.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence