iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-091218

Ensembl Protein ID

ENSPTRP00000029040.5

UniProt Accession

H2QR13; H2QR13_PANTR

Genbank Protein ID

JAA01027.1; JAA17077.1; JAA28456.1; JAA41869.1; JAA41870.1

Protein Name

General transcription factor IIH, polypeptide 2, 44kDa; General transcription factor IIH, polypeptide 2C; General transcription factor IIH, polypeptide 2D

Genbank Nucleotide ID

AACZ03042365; GABF01005068; GABD01004644; GABE01002870; GABE01002869

Gene Name

GTF2H2C; LOC461830; GTF2H2; GTF2H2D

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000016953.5	ENSPTRT00000031443.5	ENSPTRP00000029040.5

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	39.09	2.00e-71	264.00	IUUC-Sce-106434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MDEEPERTKR WEGGYERTWE ILKEDESGSL KATIEDILFK AKRKRVFEHH GQVRLGMMRH 60
LYVVVDGSRT MEDQDLKPNR LTCTLKLLEY FVEEYFDQNP ISQIGIIVTK SKRAEKLTEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTCCTTCTA GCGGGGCCGG TGAGTCCGCG TGTGGAAGTC TGTGAGGCGC AGAGGTGGGG 60
CAGGCCGTCT GGCTAGCTAG GCGGCTGGGA GCGTTTTCGT GGCGGGGAAC GGAGGTTGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007198--Ssl1-like
IPR004595--TFIIH_C1-like_dom
IPR012170--TFIIH_SSL1/p44
IPR002035--VWF_A
IPR013087--Znf_C2H2_type

PROSITE

PS50234--VWFA
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF07975--C1_4
PF04056--Ssl1

SMART

SM01047--C1_4
SM00327--VWA

Gene Ontology

GO:0000439--C:core TFIIH complex
GO:0005675--C:holo TFIIH complex
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding
GO:0006289--P:nucleotide-excision repair
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated

KEGG

ptr:461830

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000536	Aegilops tauschii	35.14	5.00e-47	181.00
IUUC-Aml-002041	Ailuropoda melanoleuca	97.47	0.00e+00	758.00
IUUC-Atr-003056	Amborella trichopoda	44.00	5.00e-72	264.00
IUUC-Apl-003464	Anas platyrhynchos	88.33	0.00e+00	644.00
IUUC-Aca-004745	Anolis carolinensis	88.80	0.00e+00	657.00
IUUC-Aly-005559	Arabidopsis lyrata	41.48	8.00e-82	297.00
IUUC-Ath-007556	Arabidopsis thaliana	41.48	1.00e-81	296.00
IUUC-Ago-007851	Ashbya gossypii	38.58	6.00e-78	284.00
IUUC-Acl-008100	Aspergillus clavatus	39.13	1.00e-77	283.00
IUUC-Afl-008649	Aspergillus flavus	39.39	1.00e-11	60.80
IUUC-Afu-009066	Aspergillus fumigatus	38.41	1.00e-78	286.00
IUUC-Ani-009372	Aspergillus nidulans	38.70	2.00e-75	275.00
IUUC-Ang-009726	Aspergillus niger	38.41	1.00e-80	293.00
IUUC-Aor-010135	Aspergillus oryzae	38.08	9.00e-76	277.00
IUUC-Ate-010399	Aspergillus terreus	37.01	2.00e-24	105.00
IUUC-Ame-011618	Astyanax mexicanus	82.47	0.00e+00	669.00
IUUC-Bgr-012154	Blumeria graminis	36.08	2.00e-75	276.00
IUUC-Bta-012353	Bos taurus	96.96	0.00e+00	757.00
IUUC-Bci-013932	Botrytis cinerea	38.10	1.00e-79	290.00
IUUC-Bdi-014391	Brachypodium distachyon	40.26	3.00e-77	281.00
IUUC-Bol-015128	Brassica oleracea	41.67	2.00e-82	299.00
IUUC-Bra-017932	Brassica rapa	41.65	2.00e-82	299.00
IUUC-Cel-018649	Caenorhabditis elegans	43.19	7.00e-84	303.00
IUUC-Cja-018776	Callithrix jacchus	99.24	0.00e+00	766.00
IUUC-Cfa-020584	Canis familiaris	98.23	0.00e+00	762.00
IUUC-Cpo-021300	Cavia porcellus	96.71	0.00e+00	757.00
IUUC-Cre-022657	Chlamydomonas reinhardtii	42.22	3.00e-74	271.00
IUUC-Csa-024092	Chlorocebus sabaeus	99.49	0.00e+00	772.00
IUUC-Cho-024919	Choloepus hoffmanni	90.45	5.00e-106	376.00
IUUC-Cin-025386	Ciona intestinalis	54.55	3.00e-109	388.00
IUUC-Csv-026295	Ciona savignyi	50.37	1.00e-106	379.00
IUUC-Cgl-026612	Colletotrichum gloeosporioides	35.15	1.00e-68	253.00
IUUC-Cne-026956	Cryptococcus neoformans	35.37	2.00e-79	289.00
IUUC-Cme-027150	Cyanidioschyzon merolae	32.15	2.00e-46	180.00
IUUC-Dre-027962	Danio rerio	82.43	0.00e+00	677.00
IUUC-Dno-029979	Dasypus novemcinctus	96.08	0.00e+00	646.00
IUUC-Dse-031405	Dothistroma septosporum	35.21	6.00e-65	241.00
IUUC-Dme-031710	Drosophila melanogaster	50.73	2.00e-109	389.00
IUUC-Ete-032631	Echinops telfairi	90.13	0.00e+00	696.00
IUUC-Eca-034054	Equus caballus	94.94	0.00e+00	733.00
IUUC-Fca-035724	Felis catus	92.66	0.00e+00	712.00
IUUC-Fal-036987	Ficedula albicollis	89.80	0.00e+00	732.00
IUUC-Fox-037692	Fusarium oxysporum	36.17	8.00e-70	257.00
IUUC-Fso-038442	Fusarium solani	37.80	1.00e-70	260.00
IUUC-Gmo-039273	Gadus morhua	77.69	0.00e+00	645.00
IUUC-Ggr-040009	Gaeumannomyces graminis	33.69	1.00e-54	207.00
IUUC-Gga-041089	Gallus gallus	88.10	0.00e+00	727.00
IUUC-Gac-041978	Gasterosteus aculeatus	77.55	1.00e-176	612.00
IUUC-Gma-043371	Glycine max	41.48	1.00e-85	309.00
IUUC-Hsa-046001	Homo sapiens	99.24	0.00e+00	770.00
IUUC-Itr-048355	Ictidomys tridecemlineatus	97.47	0.00e+00	786.00
IUUC-Kpa-049235	Komagataella pastoris	40.84	9.00e-74	270.00
IUUC-Lch-049926	Latimeria chalumnae	85.06	0.00e+00	689.00
IUUC-Lpe-051352	Leersia perrieri	40.00	3.00e-74	272.00
IUUC-Loc-051987	Lepisosteus oculatus	84.50	0.00e+00	686.00
IUUC-Lma-053171	Leptosphaeria maculans	33.26	1.00e-58	221.00
IUUC-Laf-054372	Loxodonta africana	97.96	0.00e+00	763.00
IUUC-Mcc-055108	Macaca mulatta	99.75	0.00e+00	773.00
IUUC-Mor-056990	Magnaporthe oryzae	34.31	2.00e-69	256.00
IUUC-Mtr-058401	Medicago truncatula	40.95	3.00e-84	305.00
IUUC-Mla-059186	Melampsora laricipopulina	39.56	1.00e-82	300.00
IUUC-Mvi-060262	Microbotryum violaceum	38.12	2.00e-81	296.00
IUUC-Mmr-061688	Microcebus murinus	89.14	0.00e+00	694.00
IUUC-Mdo-062154	Monodelphis domestica	94.68	0.00e+00	764.00
IUUC-Mmu-064232	Mus musculus	97.22	0.00e+00	751.00
IUUC-Mac-065091	Musa acuminata	42.08	3.00e-81	295.00
IUUC-Mpu-066747	Mustela putorius furo	90.89	0.00e+00	689.00
IUUC-Mlu-067799	Myotis lucifugus	88.64	0.00e+00	672.00
IUUC-Nfi-068371	Neosartorya fischeri	32.05	7.00e-18	82.80
IUUC-Ncr-068704	Neurospora crassa	36.98	6.00e-69	254.00
IUUC-Nle-069054	Nomascus leucogenys	98.73	0.00e+00	763.00
IUUC-Ont-071624	Oreochromis niloticus	78.06	0.00e+00	628.00
IUUC-Oan-072898	Ornithorhynchus anatinus	92.66	0.00e+00	745.00
IUUC-Ocu-074289	Oryctolagus cuniculus	98.71	2.00e-177	614.00
IUUC-Oba-075985	Oryza barthii	39.49	2.00e-73	269.00
IUUC-Obr-076887	Oryza brachyantha	40.36	7.00e-77	280.00
IUUC-Ogl-077823	Oryza glaberrima	39.49	2.00e-73	269.00
IUUC-Ogu-078412	Oryza glumaepatula	41.14	6.00e-67	248.00
IUUC-Oin-079569	Oryza indica	36.62	2.00e-49	189.00
IUUC-Olo-080249	Oryza longistaminata	36.75	2.00e-48	187.00
IUUC-Ome-081240	Oryza meridionalis	41.14	7.00e-67	248.00
IUUC-Oni-082152	Oryza nivara	41.14	6.00e-67	248.00
IUUC-Opu-084011	Oryza punctata	39.24	5.00e-73	268.00
IUUC-Oru-084719	Oryza rufipogon	40.79	1.00e-68	253.00
IUUC-Osa-085286	Oryza sativa	39.75	1.00e-74	273.00
IUUC-Ola-086525	Oryzias latipes	68.45	1.00e-149	522.00
IUUC-Olu-087876	Ostreococcus lucimarinus	41.49	9.00e-66	243.00
IUUC-Oga-088125	Otolemur garnettii	95.44	0.00e+00	750.00
IUUC-Oar-089701	Ovis aries	97.47	0.00e+00	763.00
IUUC-Pan-091755	Papio anubis	99.75	0.00e+00	773.00
IUUC-Psi-094061	Pelodiscus sinensis	93.67	0.00e+00	757.00
IUUC-Pma-094430	Petromyzon marinus	76.28	7.00e-115	405.00
IUUC-Pno-094900	Phaeosphaeria nodorum	31.11	1.00e-22	101.00
IUUC-Ppa-095895	Physcomitrella patens	42.04	2.00e-82	299.00
IUUC-Pfo-096297	Poecilia formosa	81.42	8.00e-121	426.00
IUUC-Pab-097717	Pongo abelii	99.75	0.00e+00	773.00
IUUC-Pop-098938	Populus trichocarpa	42.12	3.00e-84	305.00
IUUC-Pca-100389	Procavia capensis	86.57	1.00e-167	582.00
IUUC-Ppe-102045	Prunus persica	42.05	4.00e-82	298.00
IUUC-Pva-102357	Pteropus vampyrus	95.19	7.00e-104	369.00
IUUC-Pgr-103399	Puccinia graminis	41.91	4.00e-89	321.00
IUUC-Ptt-103872	Puccinia triticina	42.16	4.00e-89	322.00
IUUC-Pte-104092	Pyrenophora teres	34.05	1.00e-51	197.00
IUUC-Pyt-104669	Pyrenophora triticirepentis	34.32	3.00e-52	199.00
IUUC-Rno-105515	Rattus norvegicus	96.46	0.00e+00	749.00
IUUC-Sce-106434	Saccharomyces cerevisiae	39.09	5.00e-79	288.00
IUUC-Sha-106808	Sarcophilus harrisii	94.94	0.00e+00	766.00
IUUC-Sja-107995	Schizosaccharomyces japonicus	40.82	3.00e-77	282.00
IUUC-Spo-108044	Schizosaccharomyces pombe	39.03	4.00e-79	288.00
IUUC-Smo-109581	Selaginella moellendorffii	42.32	2.00e-84	305.00
IUUC-Sit-110704	Setaria italica	40.20	9.00e-78	283.00
IUUC-Sly-110990	Solanum lycopersicum	44.81	2.00e-67	248.00
IUUC-Stu-112542	Solanum tuberosum	42.01	7.00e-46	176.00
IUUC-Sar-113766	Sorex araneus	95.98	6.00e-178	616.00
IUUC-Sbi-114016	Sorghum bicolor	40.46	1.00e-75	276.00
IUUC-Sre-115099	Sporisorium reilianum	37.92	3.00e-78	285.00
IUUC-Ssc-115277	Sus scrofa	97.72	0.00e+00	746.00
IUUC-Tgu-117343	Taeniopygia guttata	88.83	0.00e+00	727.00
IUUC-Tru-118397	Takifugu rubripes	76.79	4.00e-175	607.00
IUUC-Tni-120272	Tetraodon nigroviridis	75.89	1.00e-172	598.00
IUUC-Tca-121514	Theobroma cacao	42.64	1.00e-87	316.00
IUUC-Tre-121990	Trichoderma reesei	37.23	5.00e-68	251.00
IUUC-Tvi-122504	Trichoderma virens	38.63	7.00e-68	250.00
IUUC-Tae-123153	Triticum aestivum	39.85	7.00e-77	280.00
IUUC-Tur-126693	Triticum urartu	42.53	8.00e-59	220.00
IUUC-Tme-127011	Tuber melanosporum	38.44	5.00e-76	278.00
IUUC-Tbe-127939	Tupaia belangeri	98.23	0.00e+00	763.00
IUUC-Ttr-128889	Tursiops truncatus	88.86	0.00e+00	700.00
IUUC-Uma-129450	Ustilago maydis	37.89	3.00e-79	288.00
IUUC-Vda-129919	Verticillium dahliae	37.62	4.00e-66	245.00
IUUC-Vpa-130419	Vicugna pacos	32.14	7.40e-02	32.00
IUUC-Vvi-130928	Vitis vinifera	44.16	4.00e-87	315.00
IUUC-Xtr-131891	Xenopus tropicalis	73.37	2.00e-176	611.00
IUUC-Xma-133260	Xiphophorus maculatus	80.63	2.00e-119	421.00
IUUC-Yli-134578	Yarrowia lipolytica	37.53	2.00e-74	273.00
IUUC-Zma-135427	Zea mays	40.56	1.00e-76	280.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence