iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007007

UUCD1 version

UUC-ArT-00552

Ensembl Protein ID

AT5G48655.1

UniProt Accession

Q8GS41; Q8GS41_ARATH

Genbank Protein ID

AAN13007.1; AED95703.1; AED95704.1; AED95705.1; ANM70501.1; ANM70502.1; ANM70503.1; BAC42844.1

Protein Name

Putative RING zinc finger; Putative uncharacterized protein At5g48655; RING/U-box superfamily protein

Genbank Nucleotide ID

AY150482; CP002688; CP002688; CP002688; CP002688; CP002688; CP002688; AK118224

Gene Name

At5g48655; At5g48655/K15N18.13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G48655	AT5G48655.1	AT5G48655.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	PINA	HINT
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	24255109

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	6.60e-07	30.6	148	186

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+++f +  +++ CgH+f++ C+++        s++ +CP+Cr
   Q: 148  CPICMCPFTE-EMSTKCGHIFCKGCIKMA------ISRQGKCPTCR 186
           ********99.556************999......9*********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MNTSEVRVPR GNRRRKAVID LNAVPVDQEG TSASVRTLTV PITPSQPAPT MIDVDAIEDD 60
VIESSASAFA EAKSKSRNAR RRPLMVDVES GGTTRFPANI SNKRRRIPSS ESVIDCEHAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTCTCACC ACCTTCGTGT TTCTCTCTCT ATTACAGAAA AAAAGATTCA AAAACCCTAG 60
ATTTCACAAA ATCGATTGGC TGTCAAATTT CTCTCCGGCG ATTTTCCTCG AGTGAAATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567--P:protein ubiquitination
GO:0010200--P:response to chitin

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000359	Aegilops tauschii	39.69	2.00e-11	60.50
IUUC-Atr-002771	Amborella trichopoda	37.57	2.00e-24	104.00
IUUC-Aly-006041	Arabidopsis lyrata	94.09	3.00e-85	306.00
IUUC-Ame-011555	Astyanax mexicanus	41.67	2.00e-11	61.20
IUUC-Bol-015546	Brassica oleracea	74.64	1.00e-53	201.00
IUUC-Bra-016991	Brassica rapa	74.64	7.00e-59	219.00
IUUC-Csv-026318	Ciona savignyi	40.32	1.00e-09	55.50
IUUC-Dre-028145	Danio rerio	44.26	7.00e-12	62.80
IUUC-Dno-030061	Dasypus novemcinctus	48.98	2.00e-09	56.60
IUUC-Dme-032177	Drosophila melanogaster	50.00	3.00e-13	68.60
IUUC-Gma-043026	Glycine max	50.00	1.00e-28	119.00
IUUC-Kpa-049242	Komagataella pastoris	38.98	6.00e-08	50.10
IUUC-Mor-057263	Magnaporthe oryzae	33.93	1.00e-06	47.80
IUUC-Mtr-058638	Medicago truncatula	45.16	5.00e-27	114.00
IUUC-Mac-064624	Musa acuminata	34.88	1.00e-20	92.80
IUUC-Obr-076349	Oryza brachyantha	58.18	7.00e-16	77.00
IUUC-Olu-087634	Ostreococcus lucimarinus	48.08	7.00e-12	62.80
IUUC-Ptr-091254	Pan troglodytes	38.98	1.00e-10	58.90
IUUC-Pop-099483	Populus trichocarpa	55.50	2.00e-40	158.00
IUUC-Ppe-101755	Prunus persica	54.86	3.00e-27	113.00
IUUC-Sit-109959	Setaria italica	61.40	3.00e-09	55.50
IUUC-Stu-112694	Solanum tuberosum	40.29	1.00e-29	122.00
IUUC-Sbi-114398	Sorghum bicolor	59.65	2.00e-09	55.10
IUUC-Tca-121320	Theobroma cacao	56.52	8.00e-45	172.00
IUUC-Tae-122783	Triticum aestivum	39.51	3.00e-12	64.30
IUUC-Vvi-131506	Vitis vinifera	47.09	3.00e-33	134.00
IUUC-Xtr-132879	Xenopus tropicalis	42.37	8.00e-10	55.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence