iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057730

Ensembl Protein ID

AES70363

UniProt Accession

G7IY21; G7IY21_MEDTR

Genbank Protein ID

AES70363.1

Protein Name

Transducin/WD-like repeat-protein

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g052220

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g052220	AES70363	AES70363

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-33	113.6	263	300
UBD/Beta-Prp	5.80e-52	178.2	214	512

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H ++v c++f  d  +++sGs Dg+ikvW++rt  +l+
   Q: 263  HDEPVLCVDFsRDsEMIASGSTDGKIKVWRIRTAQCLR 300
           999********777*******************99986 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkl........lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk.ghedsvlsls 101
           ks   c  fspd+++l++ s dg i+vwd+ +gkl         +++  h+++v +v+fs+d++++++gs+D+ ikvw ++t +c++ l+ +h++ v+s+s
   Q: 214  KSHAECARFSPDGQYLVSCSIDGFIEVWDYISGKLkkdlqyqaEETFMMHDEPVLCVDFSRDSEMIASGSTDGKIKVWRIRTAQCLRRLEhAHSQGVTSVS 314
           667889*****************************999999999999999999************************************999********* PP
   S: 102  fspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl......tgghtdsvysls.fdsngkel 195
           fs++g+ l+s+s d+t+r+  l++g+ l+  ++gh++ vn +++  dg  ++++s D tv++Wdlkt ++l+t+      +g  + sv+s+  f +n +++
   Q: 315  FSRDGSQLLSTSFDSTARIHGLKSGKMLK-EFRGHTSYVNDATFTNDGTRVITASSDCTVKVWDLKTTDCLQTFkpppplRG-GDASVNSVFiFPKNTEHI 413
           *****************************.*************************************************877.7888888866******** PP
   S: 196  vsgsldgtvklwdlqtgecvrtln.ghtdnvksvrfs..pnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwk 293
           v + + +++ +  lq g++v+++  g ++    v+++  p++e+++++++D+  +++ ++sg+l + ++ h + +i v++ ++ +n ++++s+d + ++wk
   Q: 414  VVCNKTSSIYIMTLQ-GQVVKSFSsGKREGGDFVAACisPKGEWIYCVGEDRNMYCFSYQSGKLEHLMTVHDKEIIGVTH-HPHRNLVATFSDDHTMKLWK 512
           **************6.66777776157777788887788***************************************99.*******************8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSTLEIEARD VIKTVLQFCK ENSLHQTFQT LQNECQVSLN TVDSIETFVA DINGGRWDAI 60
LPQVSQLKLP RNTLEDLYEQ IVLEMIELRE LDTARAILRQ TQVMGVMKQE QPERYLRLEH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATATCCCTTT ATTCCAAATC GTTTTCGTTC AAAATTGTTT GATTAACCCT AAAACCCTAC 60
ACAGACTCAT TCACTCTCTC GCAAACAATG TCTACGCTAG AAATCGAAGC TCGAGAGTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0008380--P:RNA splicing

KEGG

mtr:MTR_3g052220

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000857	Aegilops tauschii	90.65	4.00e-74	269.00
IUUC-Aml-001330	Ailuropoda melanoleuca	65.23	0.00e+00	712.00
IUUC-Atr-002570	Amborella trichopoda	86.74	0.00e+00	931.00
IUUC-Apl-003826	Anas platyrhynchos	65.79	0.00e+00	687.00
IUUC-Aca-005183	Anolis carolinensis	64.98	0.00e+00	707.00
IUUC-Aly-005632	Arabidopsis lyrata	85.10	0.00e+00	926.00
IUUC-Ath-007219	Arabidopsis thaliana	84.74	0.00e+00	917.00
IUUC-Ame-011374	Astyanax mexicanus	64.84	0.00e+00	708.00
IUUC-Bta-012890	Bos taurus	65.23	0.00e+00	712.00
IUUC-Bdi-014061	Brachypodium distachyon	84.74	0.00e+00	918.00
IUUC-Bol-016332	Brassica oleracea	86.05	0.00e+00	926.00
IUUC-Bra-017612	Brassica rapa	85.88	0.00e+00	926.00
IUUC-Cel-018238	Caenorhabditis elegans	51.37	2.00e-161	561.00
IUUC-Cja-019336	Callithrix jacchus	65.23	0.00e+00	712.00
IUUC-Cfa-021108	Canis familiaris	65.04	0.00e+00	711.00
IUUC-Cpo-022052	Cavia porcellus	65.23	0.00e+00	712.00
IUUC-Cre-022595	Chlamydomonas reinhardtii	65.36	0.00e+00	711.00
IUUC-Csa-023488	Chlorocebus sabaeus	65.23	0.00e+00	712.00
IUUC-Cho-025010	Choloepus hoffmanni	57.42	2.00e-180	624.00
IUUC-Cin-025251	Ciona intestinalis	63.11	0.00e+00	687.00
IUUC-Csv-026092	Ciona savignyi	59.89	0.00e+00	627.00
IUUC-Dre-027382	Danio rerio	64.26	0.00e+00	702.00
IUUC-Dno-029007	Dasypus novemcinctus	65.43	0.00e+00	712.00
IUUC-Dor-030180	Dipodomys ordii	56.88	5.00e-123	433.00
IUUC-Dme-031762	Drosophila melanogaster	61.72	0.00e+00	683.00
IUUC-Ete-032933	Echinops telfairi	64.80	1.00e-167	581.00
IUUC-Eca-033864	Equus caballus	65.48	0.00e+00	702.00
IUUC-Eeu-034635	Erinaceus europaeus	59.00	1.00e-147	515.00
IUUC-Fca-036119	Felis catus	65.23	0.00e+00	712.00
IUUC-Fal-037396	Ficedula albicollis	65.93	0.00e+00	698.00
IUUC-Gmo-038962	Gadus morhua	64.06	0.00e+00	697.00
IUUC-Gga-040134	Gallus gallus	65.43	0.00e+00	712.00
IUUC-Gac-041630	Gasterosteus aculeatus	63.87	0.00e+00	697.00
IUUC-Gma-043928	Glycine max	93.37	0.00e+00	991.00
IUUC-Ggo-045061	Gorilla gorilla	64.98	0.00e+00	707.00
IUUC-Hsa-046215	Homo sapiens	65.23	0.00e+00	712.00
IUUC-Hvu-047799	Hordeum vulgare	85.64	0.00e+00	644.00
IUUC-Itr-048826	Ictidomys tridecemlineatus	65.23	0.00e+00	712.00
IUUC-Lch-050209	Latimeria chalumnae	60.62	0.00e+00	649.00
IUUC-Lpe-050740	Leersia perrieri	86.33	0.00e+00	933.00
IUUC-Loc-052739	Lepisosteus oculatus	60.42	0.00e+00	648.00
IUUC-Laf-053895	Loxodonta africana	65.11	0.00e+00	707.00
IUUC-Mcc-055183	Macaca mulatta	65.23	0.00e+00	712.00
IUUC-Mga-059222	Meleagris gallopavo	66.03	1.00e-169	588.00
IUUC-Mmr-061749	Microcebus murinus	65.48	0.00e+00	704.00
IUUC-Mdo-062920	Monodelphis domestica	65.04	0.00e+00	710.00
IUUC-Mmu-063228	Mus musculus	65.23	0.00e+00	712.00
IUUC-Mac-065084	Musa acuminata	89.08	0.00e+00	960.00
IUUC-Mpu-066162	Mustela putorius furo	65.23	0.00e+00	712.00
IUUC-Mlu-067471	Myotis lucifugus	64.45	0.00e+00	706.00
IUUC-Nle-070129	Nomascus leucogenys	65.23	0.00e+00	712.00
IUUC-Opr-071176	Ochotona princeps	65.48	0.00e+00	702.00
IUUC-Ont-071830	Oreochromis niloticus	64.65	0.00e+00	708.00
IUUC-Oan-072778	Ornithorhynchus anatinus	65.43	0.00e+00	712.00
IUUC-Ocu-074570	Oryctolagus cuniculus	65.23	0.00e+00	712.00
IUUC-Oba-075507	Oryza barthii	86.13	0.00e+00	934.00
IUUC-Obr-076672	Oryza brachyantha	87.70	0.00e+00	947.00
IUUC-Ogl-077110	Oryza glaberrima	86.13	0.00e+00	934.00
IUUC-Ogu-077976	Oryza glumaepatula	86.13	0.00e+00	934.00
IUUC-Oin-079525	Oryza indica	86.13	0.00e+00	934.00
IUUC-Olo-080391	Oryza longistaminata	83.68	0.00e+00	924.00
IUUC-Oni-082778	Oryza nivara	86.13	0.00e+00	934.00
IUUC-Opu-083710	Oryza punctata	86.13	0.00e+00	933.00
IUUC-Oru-084250	Oryza rufipogon	86.13	0.00e+00	934.00
IUUC-Osa-085363	Oryza sativa	86.13	0.00e+00	934.00
IUUC-Ola-087092	Oryzias latipes	64.65	0.00e+00	705.00
IUUC-Olu-087753	Ostreococcus lucimarinus	53.98	9.00e-149	519.00
IUUC-Oga-088278	Otolemur garnettii	59.38	0.00e+00	627.00
IUUC-Oar-089664	Ovis aries	64.85	0.00e+00	707.00
IUUC-Ptr-090991	Pan troglodytes	65.23	0.00e+00	712.00
IUUC-Pan-092697	Papio anubis	65.23	0.00e+00	712.00
IUUC-Psi-093204	Pelodiscus sinensis	65.73	0.00e+00	697.00
IUUC-Ppa-095325	Physcomitrella patens	83.63	0.00e+00	908.00
IUUC-Pfo-096988	Poecilia formosa	64.65	0.00e+00	707.00
IUUC-Pab-098288	Pongo abelii	65.23	0.00e+00	712.00
IUUC-Pop-098787	Populus trichocarpa	90.41	0.00e+00	972.00
IUUC-Pca-100583	Procavia capensis	60.91	0.00e+00	632.00
IUUC-Ppe-101307	Prunus persica	89.28	0.00e+00	961.00
IUUC-Pva-102711	Pteropus vampyrus	65.23	0.00e+00	712.00
IUUC-Rno-105614	Rattus norvegicus	65.23	0.00e+00	712.00
IUUC-Sha-107017	Sarcophilus harrisii	65.23	0.00e+00	712.00
IUUC-Smo-108800	Selaginella moellendorffii	77.50	0.00e+00	824.00
IUUC-Sit-110278	Setaria italica	86.52	0.00e+00	925.00
IUUC-Sly-111777	Solanum lycopersicum	86.91	0.00e+00	939.00
IUUC-Stu-112293	Solanum tuberosum	86.91	0.00e+00	940.00
IUUC-Sar-112955	Sorex araneus	58.67	2.00e-178	617.00
IUUC-Sbi-114802	Sorghum bicolor	86.91	0.00e+00	922.00
IUUC-Ssc-116054	Sus scrofa	65.23	0.00e+00	712.00
IUUC-Tgu-116909	Taeniopygia guttata	65.36	0.00e+00	703.00
IUUC-Tru-118195	Takifugu rubripes	65.23	0.00e+00	712.00
IUUC-Tsy-119420	Tarsius syrichta	59.57	0.00e+00	628.00
IUUC-Tni-120416	Tetraodon nigroviridis	64.65	0.00e+00	704.00
IUUC-Tca-121653	Theobroma cacao	90.41	0.00e+00	963.00
IUUC-Tae-125609	Triticum aestivum	85.94	0.00e+00	927.00
IUUC-Tur-126197	Triticum urartu	83.98	0.00e+00	666.00
IUUC-Tbe-128009	Tupaia belangeri	65.49	3.00e-132	464.00
IUUC-Ttr-128719	Tursiops truncatus	58.59	0.00e+00	626.00
IUUC-Vpa-130579	Vicugna pacos	65.04	0.00e+00	705.00
IUUC-Vvi-131127	Vitis vinifera	89.65	0.00e+00	964.00
IUUC-Xtr-132950	Xenopus tropicalis	60.85	0.00e+00	651.00
IUUC-Xma-133537	Xiphophorus maculatus	64.65	0.00e+00	707.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence