iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017143

Ensembl Protein ID

Bra019610.1-P

UniProt Accession

M4DSW7; M4DSW7_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra019610	Bra019610.1	Bra019610.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-57	189.9	112	150
UBD/Beta-Prp	2.90e-76	257.5	23	316

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt+ v+c++f +  ++++sGs D t+++WD++tg++lk
   Q: 112  GHTNYVFCVNFnPQsNMIASGSFDETVRIWDVTTGKCLK 150
           8***********666**********************97 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkl.....lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvl 98
           +h + ++++kfs d++lla++s d+ti+ + +  +        + + ghe+++++v fs d+ +++++s+D+t+k+wd+++g+ + tl+gh+++v 
   Q: 23   SHAHALSSLKFSSDGRLLASASGDQTIRTYAINLKGDpiaeaAQVFTGHESGISDVAFSTDARFIASASDDKTVKLWDVESGSLIKTLQGHTNYVF 118
           57778999**********************9987555788866777************************************************** PP
   S: 99   slsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngke 194
           +++f+p+++ ++sGs d+t+r+wd+ tg+cl+ +l  h++ v+ v ++ dg+l+vs+s+D+ +r+Wd+ tg +++tl  + +++v  + f++ngk+
   Q: 119  CVNFNPQSNMIASGSFDETVRIWDVTTGKCLK-VLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLMDDENPPVSFVRFSPNGKF 213
           ********************************.********************************************999**************** PP
   S: 195  lvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs...pnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgseds 287
           ++ g ld+t++lw++++ + ++t++gh +  +sv       n++r+vsgs+D+ +++W l s++ll++l++h + v+sva+ ++++n +++gs d+
   Q: 214  ILVGTLDNTLRLWNISSAKYIKTYTGHANSQYSVSSAfsvTNGKRIVSGSEDNCVYMWELNSRKLLQKLEGHTEPVMSVAC-HPTENLIASGSLDK 308
           ****************************9999886555589****************************************.************** PP
   S: 288  kvniwklk 295
           +++iw+++
   Q: 309  SIRIWAQE 316
           *****975 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAEEVPAAAA SYIPYVHSQT LTSHAHALSS LKFSSDGRLL ASASGDQTIR TYAINLKGDP 60
IAEAAQVFTG HESGISDVAF STDARFIASA SDDKTVKLWD VESGSLIKTL QGHTNYVFCV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGAAG AAGTTCCAGC AGCAGCAGCA TCTTACATCC CATACGTTCA CTCCCAAACC 60
CTAACTTCCC ACGCCCACGC CCTATCCTCC CTTAAATTCT CCTCCGATGG CCGCCTCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0048188--C:Set1C/COMPASS complex
GO:0010228--P:vegetative to reproductive phase transition of meristem

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002420	Ailuropoda melanoleuca	62.17	2.00e-114	405.00
IUUC-Atr-002439	Amborella trichopoda	68.89	4.00e-133	466.00
IUUC-Apl-003436	Anas platyrhynchos	57.89	2.00e-104	371.00
IUUC-Aca-004259	Anolis carolinensis	61.84	4.00e-114	404.00
IUUC-Aly-005723	Arabidopsis lyrata	85.49	9.00e-167	578.00
IUUC-Ath-007308	Arabidopsis thaliana	86.75	9.00e-168	582.00
IUUC-Ago-007915	Ashbya gossypii	36.33	2.00e-44	172.00
IUUC-Acl-008045	Aspergillus clavatus	42.58	8.00e-70	257.00
IUUC-Afl-008596	Aspergillus flavus	42.54	2.00e-69	256.00
IUUC-Afu-009074	Aspergillus fumigatus	42.53	2.00e-70	259.00
IUUC-Ani-009318	Aspergillus nidulans	42.61	2.00e-68	252.00
IUUC-Ang-009775	Aspergillus niger	42.31	2.00e-70	259.00
IUUC-Aor-010222	Aspergillus oryzae	42.54	2.00e-69	256.00
IUUC-Ate-010583	Aspergillus terreus	43.09	5.00e-69	254.00
IUUC-Ame-011349	Astyanax mexicanus	62.17	3.00e-114	404.00
IUUC-Bgr-011968	Blumeria graminis	43.92	1.00e-69	256.00
IUUC-Bta-013016	Bos taurus	62.17	2.00e-114	404.00
IUUC-Bci-013948	Botrytis cinerea	43.58	1.00e-65	243.00
IUUC-Bdi-014263	Brachypodium distachyon	62.38	2.00e-120	424.00
IUUC-Bol-015900	Brassica oleracea	95.57	0.00e+00	625.00
IUUC-Cel-018355	Caenorhabditis elegans	56.42	8.00e-103	366.00
IUUC-Cja-019936	Callithrix jacchus	62.17	2.00e-114	405.00
IUUC-Cfa-020596	Canis familiaris	62.17	2.00e-114	405.00
IUUC-Cpo-021318	Cavia porcellus	62.17	2.00e-114	405.00
IUUC-Cre-022935	Chlamydomonas reinhardtii	40.12	4.00e-69	254.00
IUUC-Csa-023053	Chlorocebus sabaeus	62.17	2.00e-114	405.00
IUUC-Cho-024642	Choloepus hoffmanni	58.47	1.00e-99	355.00
IUUC-Cin-025495	Ciona intestinalis	59.87	4.00e-112	397.00
IUUC-Csv-025988	Ciona savignyi	60.20	2.00e-111	395.00
IUUC-Cgl-026771	Colletotrichum gloeosporioides	33.03	1.00e-45	178.00
IUUC-Cne-027025	Cryptococcus neoformans	32.07	1.00e-49	190.00
IUUC-Cme-027119	Cyanidioschyzon merolae	49.23	7.00e-88	317.00
IUUC-Dre-027521	Danio rerio	62.17	2.00e-114	404.00
IUUC-Dno-029739	Dasypus novemcinctus	62.17	2.00e-114	404.00
IUUC-Dor-030966	Dipodomys ordii	62.17	2.00e-114	405.00
IUUC-Dse-031189	Dothistroma septosporum	41.82	5.00e-73	268.00
IUUC-Dme-031613	Drosophila melanogaster	60.86	9.00e-113	399.00
IUUC-Ete-033098	Echinops telfairi	54.01	2.00e-102	365.00
IUUC-Eca-033790	Equus caballus	62.17	2.00e-114	405.00
IUUC-Eeu-034805	Erinaceus europaeus	58.14	6.00e-100	356.00
IUUC-Fca-035901	Felis catus	62.17	2.00e-114	405.00
IUUC-Fal-037413	Ficedula albicollis	62.17	1.00e-114	405.00
IUUC-Fox-037876	Fusarium oxysporum	46.34	2.00e-55	208.00
IUUC-Fso-038216	Fusarium solani	36.61	5.00e-48	186.00
IUUC-Gmo-039131	Gadus morhua	62.54	1.00e-113	402.00
IUUC-Ggr-040071	Gaeumannomyces graminis	36.82	1.00e-52	201.00
IUUC-Gga-040789	Gallus gallus	62.17	1.00e-114	405.00
IUUC-Gac-042634	Gasterosteus aculeatus	62.54	5.00e-113	400.00
IUUC-Gma-043987	Glycine max	69.65	7.00e-136	476.00
IUUC-Ggo-044443	Gorilla gorilla	62.17	2.00e-114	405.00
IUUC-Hsa-046290	Homo sapiens	62.17	2.00e-114	405.00
IUUC-Hvu-047077	Hordeum vulgare	59.56	3.00e-78	284.00
IUUC-Itr-048954	Ictidomys tridecemlineatus	62.17	2.00e-114	405.00
IUUC-Kpa-049404	Komagataella pastoris	43.37	4.00e-61	227.00
IUUC-Lch-049539	Latimeria chalumnae	62.17	2.00e-114	405.00
IUUC-Lpe-051082	Leersia perrieri	62.87	2.00e-120	424.00
IUUC-Loc-051743	Lepisosteus oculatus	62.17	3.00e-114	404.00
IUUC-Lma-053188	Leptosphaeria maculans	43.17	9.00e-75	273.00
IUUC-Laf-054432	Loxodonta africana	59.06	4.00e-111	394.00
IUUC-Mcc-055603	Macaca mulatta	62.17	2.00e-114	405.00
IUUC-Meu-056440	Macropus eugenii	57.89	4.00e-98	350.00
IUUC-Mor-056965	Magnaporthe oryzae	32.29	4.00e-54	205.00
IUUC-Mpo-057333	Magnaporthe poae	38.52	3.00e-51	196.00
IUUC-Mtr-057951	Medicago truncatula	67.38	1.00e-136	478.00
IUUC-Mla-058896	Melampsora laricipopulina	38.24	2.00e-63	236.00
IUUC-Mga-060046	Meleagris gallopavo	61.84	3.00e-114	404.00
IUUC-Mvi-060453	Microbotryum violaceum	43.57	3.00e-77	282.00
IUUC-Mmr-061020	Microcebus murinus	58.31	8.00e-108	383.00
IUUC-Mdo-062204	Monodelphis domestica	60.20	2.00e-111	395.00
IUUC-Mmu-063917	Mus musculus	62.17	2.00e-114	405.00
IUUC-Mac-065310	Musa acuminata	64.71	2.00e-123	435.00
IUUC-Mpu-066072	Mustela putorius furo	62.17	2.00e-114	405.00
IUUC-Mlu-068209	Myotis lucifugus	62.17	2.00e-114	405.00
IUUC-Nfi-068538	Neosartorya fischeri	42.21	7.00e-70	257.00
IUUC-Ncr-068651	Neurospora crassa	34.48	2.00e-55	209.00
IUUC-Nle-069383	Nomascus leucogenys	60.47	6.00e-102	363.00
IUUC-Opr-070937	Ochotona princeps	59.12	5.00e-100	357.00
IUUC-Ont-071458	Oreochromis niloticus	62.88	4.00e-114	404.00
IUUC-Oan-073597	Ornithorhynchus anatinus	62.17	1.00e-114	405.00
IUUC-Ocu-074180	Oryctolagus cuniculus	28.43	1.00e-39	157.00
IUUC-Oba-075082	Oryza barthii	57.73	8.00e-103	366.00
IUUC-Obr-076318	Oryza brachyantha	69.95	8.00e-98	348.00
IUUC-Ogl-077251	Oryza glaberrima	61.78	9.00e-121	426.00
IUUC-Oin-079601	Oryza indica	55.91	7.00e-116	409.00
IUUC-Olo-080976	Oryza longistaminata	66.16	6.00e-111	393.00
IUUC-Ome-081430	Oryza meridionalis	62.18	5.00e-121	426.00
IUUC-Opu-083880	Oryza punctata	62.18	6.00e-120	423.00
IUUC-Osa-085706	Oryza sativa	61.78	9.00e-121	426.00
IUUC-Ola-087134	Oryzias latipes	62.88	3.00e-114	404.00
IUUC-Olu-087660	Ostreococcus lucimarinus	45.62	5.00e-42	162.00
IUUC-Oga-088672	Otolemur garnettii	62.17	1.00e-114	405.00
IUUC-Oar-089860	Ovis aries	59.47	6.00e-102	363.00
IUUC-Ptr-091513	Pan troglodytes	62.17	2.00e-114	405.00
IUUC-Pan-092046	Papio anubis	62.17	2.00e-114	405.00
IUUC-Psi-093192	Pelodiscus sinensis	62.17	1.00e-114	405.00
IUUC-Pma-094319	Petromyzon marinus	29.07	2.00e-39	155.00
IUUC-Pno-094881	Phaeosphaeria nodorum	47.06	8.00e-81	293.00
IUUC-Ppa-095367	Physcomitrella patens	63.35	3.00e-128	450.00
IUUC-Pfo-097434	Poecilia formosa	62.88	3.00e-114	404.00
IUUC-Pab-098758	Pongo abelii	60.47	4.00e-102	363.00
IUUC-Pop-099778	Populus trichocarpa	71.97	2.00e-140	491.00
IUUC-Pca-100281	Procavia capensis	49.63	7.00e-70	256.00
IUUC-Ppe-101341	Prunus persica	70.48	5.00e-134	469.00
IUUC-Pva-103020	Pteropus vampyrus	61.84	1.00e-113	402.00
IUUC-Pgr-103589	Puccinia graminis	34.86	4.00e-59	221.00
IUUC-Pte-104153	Pyrenophora teres	47.76	1.00e-81	296.00
IUUC-Pyt-104712	Pyrenophora triticirepentis	47.39	6.00e-66	243.00
IUUC-Rno-105858	Rattus norvegicus	62.17	2.00e-114	405.00
IUUC-Sce-106243	Saccharomyces cerevisiae	33.22	4.00e-40	157.00
IUUC-Sha-107101	Sarcophilus harrisii	62.17	1.00e-114	405.00
IUUC-Sja-107858	Schizosaccharomyces japonicus	43.89	5.00e-56	211.00
IUUC-Spo-108117	Schizosaccharomyces pombe	40.43	2.00e-53	202.00
IUUC-Ssl-108631	Sclerotinia sclerotiorum	42.71	2.00e-61	231.00
IUUC-Smo-109155	Selaginella moellendorffii	64.44	5.00e-124	436.00
IUUC-Sit-110688	Setaria italica	62.99	2.00e-121	428.00
IUUC-Sly-110891	Solanum lycopersicum	70.23	4.00e-132	463.00
IUUC-Stu-112365	Solanum tuberosum	69.90	7.00e-132	462.00
IUUC-Sar-113309	Sorex araneus	28.12	2.00e-39	156.00
IUUC-Sbi-114284	Sorghum bicolor	63.31	1.00e-120	425.00
IUUC-Sre-115180	Sporisorium reilianum	39.40	5.00e-57	214.00
IUUC-Ssc-116204	Sus scrofa	62.17	1.00e-114	405.00
IUUC-Tgu-117172	Taeniopygia guttata	62.17	1.00e-114	405.00
IUUC-Tru-118320	Takifugu rubripes	62.54	3.00e-114	404.00
IUUC-Tsy-119493	Tarsius syrichta	28.91	9.00e-39	154.00
IUUC-Tni-120660	Tetraodon nigroviridis	64.36	4.00e-71	260.00
IUUC-Tca-121051	Theobroma cacao	73.72	5.00e-142	496.00
IUUC-Tre-122237	Trichoderma reesei	40.71	2.00e-68	253.00
IUUC-Tvi-122635	Trichoderma virens	39.87	4.00e-68	251.00
IUUC-Tae-125819	Triticum aestivum	60.19	2.00e-119	421.00
IUUC-Tur-126217	Triticum urartu	56.60	1.00e-80	292.00
IUUC-Tme-127061	Tuber melanosporum	46.28	2.00e-86	312.00
IUUC-Tbe-127488	Tupaia belangeri	58.47	8.00e-102	363.00
IUUC-Ttr-129309	Tursiops truncatus	58.88	3.00e-106	377.00
IUUC-Uma-129585	Ustilago maydis	38.83	1.00e-67	249.00
IUUC-Vda-129907	Verticillium dahliae	37.11	1.00e-60	227.00
IUUC-Vpa-130384	Vicugna pacos	59.14	5.00e-101	360.00
IUUC-Vvi-131269	Vitis vinifera	73.20	2.00e-132	464.00
IUUC-Xtr-131945	Xenopus tropicalis	61.84	1.00e-113	402.00
IUUC-Xma-132997	Xiphophorus maculatus	62.88	3.00e-114	404.00
IUUC-Yli-134418	Yarrowia lipolytica	39.32	4.00e-66	244.00
IUUC-Zma-135765	Zea mays	62.01	5.00e-119	420.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence