iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mpu-066534

Ensembl Protein ID

ENSMPUP00000012228.1

UniProt Accession

M3YLM1; M3YLM1_MUSPF

Genbank Protein ID

ENSMPUP00000012228

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEYP01094034

Gene Name

TNRC6A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMPUG00000012324.1	ENSMPUT00000012428.1	ENSMPUP00000012228.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	37.54	1.00e-32	140.00	IUUC-Dme-032014

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Mustela putorius furo

Protein Sequence
(Fasta)

VPEQIKPSVS QPQPANSNNG TSTATSTNNN AKRATAPPQQ PPQPAQALPR YPREVPPRFR 60
HQEHKQLLKR GQHFPVIAAN LGSAVKPAPE TFPVHSVNGT QVTGAGVVPR SGEMWMDLGL 120

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Nucleotide Sequence
(Fasta)

GTGCCAGAAC AGATAAAGCC CAGTGTAAGC CAGCCTCAGC CTGCCAACTC TAATAACGGC 60
ACTTCCACAG CAACCAGCAC TAATAATAAT GCCAAGCGAG CCACAGCCAA CAATCCGCAG 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019486--Argonaute_hook_dom
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR032226--TNRC6_PABC-bd
IPR033501--TNRC6A

Pfam

PF10427--Ago_hook
PF16608--TNRC6-PABC_bdg

Gene Ontology

GO:0005794--C:Golgi apparatus
GO:0035068--C:micro-ribonucleoprotein complex
GO:0005654--C:nucleoplasm
GO:0000932--C:P-body
GO:0000166--F:nucleotide binding
GO:0003723--F:RNA binding
GO:0035278--P:miRNA mediated inhibition of translation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001985	Ailuropoda melanoleuca	83.55	0.00e+00	2450.00
IUUC-Apl-003191	Anas platyrhynchos	38.94	3.00e-98	354.00
IUUC-Aca-004717	Anolis carolinensis	38.78	4.00e-95	343.00
IUUC-Ame-010681	Astyanax mexicanus	46.25	4.00e-72	267.00
IUUC-Bta-012915	Bos taurus	82.15	0.00e+00	2370.00
IUUC-Cja-019614	Callithrix jacchus	37.38	2.00e-87	317.00
IUUC-Cfa-020452	Canis familiaris	85.67	0.00e+00	2485.00
IUUC-Cpo-021452	Cavia porcellus	41.48	2.00e-95	344.00
IUUC-Csa-023169	Chlorocebus sabaeus	82.14	0.00e+00	2382.00
IUUC-Cho-024655	Choloepus hoffmanni	79.72	0.00e+00	1251.00
IUUC-Dre-028059	Danio rerio	53.37	1.00e-72	269.00
IUUC-Dno-029734	Dasypus novemcinctus	80.57	0.00e+00	2352.00
IUUC-Dor-030671	Dipodomys ordii	83.39	0.00e+00	1704.00
IUUC-Dme-032014	Drosophila melanogaster	36.42	6.00e-29	123.00
IUUC-Ete-032774	Echinops telfairi	48.48	2.00e-80	295.00
IUUC-Eca-033866	Equus caballus	38.44	4.00e-85	310.00
IUUC-Eeu-034572	Erinaceus europaeus	48.02	2.00e-45	178.00
IUUC-Fal-036856	Ficedula albicollis	36.21	1.00e-85	312.00
IUUC-Gga-040531	Gallus gallus	40.19	2.00e-92	334.00
IUUC-Gac-041681	Gasterosteus aculeatus	47.82	2.00e-75	278.00
IUUC-Ggo-045143	Gorilla gorilla	37.54	2.00e-85	311.00
IUUC-Hsa-045913	Homo sapiens	37.34	9.00e-87	316.00
IUUC-Lch-049619	Latimeria chalumnae	61.13	0.00e+00	1695.00
IUUC-Loc-052289	Lepisosteus oculatus	52.96	1.00e-80	295.00
IUUC-Laf-053607	Loxodonta africana	37.84	2.00e-79	291.00
IUUC-Mcc-055342	Macaca mulatta	37.15	7.00e-82	300.00
IUUC-Meu-056275	Macropus eugenii	77.48	0.00e+00	1147.00
IUUC-Mga-059241	Meleagris gallopavo	70.49	0.00e+00	2082.00
IUUC-Mvi-060308	Microbotryum violaceum	32.81	6.90e-01	28.90
IUUC-Mmr-061348	Microcebus murinus	84.23	0.00e+00	2443.00
IUUC-Mdo-062155	Monodelphis domestica	40.95	3.00e-96	347.00
IUUC-Mmu-064259	Mus musculus	79.81	0.00e+00	1092.00
IUUC-Mlu-067834	Myotis lucifugus	79.41	0.00e+00	2368.00
IUUC-Nle-069168	Nomascus leucogenys	81.22	0.00e+00	2362.00
IUUC-Opr-070976	Ochotona princeps	39.58	2.00e-112	401.00
IUUC-Ocu-073749	Oryctolagus cuniculus	79.93	0.00e+00	2311.00
IUUC-Oga-088116	Otolemur garnettii	81.10	0.00e+00	2384.00
IUUC-Oar-090041	Ovis aries	84.69	0.00e+00	2308.00
IUUC-Ptr-091135	Pan troglodytes	37.63	2.00e-82	301.00
IUUC-Pan-092665	Papio anubis	37.20	5.00e-82	300.00
IUUC-Psi-093057	Pelodiscus sinensis	36.90	5.00e-94	340.00
IUUC-Pma-094508	Petromyzon marinus	41.60	3.00e-45	176.00
IUUC-Pfo-097115	Poecilia formosa	44.18	1.00e-40	161.00
IUUC-Pab-097935	Pongo abelii	82.41	0.00e+00	2396.00
IUUC-Pca-100481	Procavia capensis	48.60	2.00e-71	265.00
IUUC-Pva-102376	Pteropus vampyrus	43.31	2.00e-114	408.00
IUUC-Rno-105508	Rattus norvegicus	82.39	0.00e+00	2351.00
IUUC-Sar-113036	Sorex araneus	45.59	2.00e-44	175.00
IUUC-Ssc-115574	Sus scrofa	48.06	5.00e-56	213.00
IUUC-Tgu-117233	Taeniopygia guttata	39.37	1.00e-92	335.00
IUUC-Tru-117725	Takifugu rubripes	48.68	4.00e-77	283.00
IUUC-Tsy-118786	Tarsius syrichta	40.15	1.00e-102	368.00
IUUC-Tbe-127551	Tupaia belangeri	81.46	0.00e+00	2310.00
IUUC-Ttr-128518	Tursiops truncatus	37.62	1.00e-81	298.00
IUUC-Vpa-130230	Vicugna pacos	76.93	0.00e+00	998.00
IUUC-Xtr-132265	Xenopus tropicalis	53.59	4.00e-82	300.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence