iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000007945.1	ENSLACT00000009065.1	ENSLACP00000008996.1
ENSLACG00000007945.1	ENSLACT00000009066.1	ENSLACP00000008997.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-15	55.5	813	845

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           gH++ vt ++f  +d +l+++G+ D +i+ W++
   Q: 813  GHSSHVTNVNFlyDDsHLISTGGKDMSIMQWRV 845
           8***********988899*************95 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MEDGFSSYSS LYDTSSLLQF CNDDSASAAS SMEVTDRIAS LEQRVQMQED EIQLLKSALA 60
DVVRRLNISE EQQAMLNRKG PTKDQGSTKK AATVESDKAG SAAKTARPLV QTLPLRPTVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGCTCCTGA GTGTCTGAGG CACATTATAG ACCTCCACTT TAAGTCTGTA AGCTGTTCGC 60
TTGTACTGTA CAAGATTGGG ATTGTAGTGT ACAAGAGCTA TACAGGGGAA AAAACAAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR005108--HELP
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0036368--P:cone photoresponse recovery

KEGG

lcm:102361396

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002077	Ailuropoda melanoleuca	80.91	0.00e+00	1352.00
IUUC-Apl-004179	Anas platyrhynchos	86.17	0.00e+00	1396.00
IUUC-Aca-004993	Anolis carolinensis	80.83	0.00e+00	1323.00
IUUC-Ame-011332	Astyanax mexicanus	74.94	0.00e+00	1304.00
IUUC-Bta-013419	Bos taurus	70.73	0.00e+00	1128.00
IUUC-Cel-018623	Caenorhabditis elegans	29.19	5.00e-80	292.00
IUUC-Cja-018976	Callithrix jacchus	82.80	0.00e+00	1376.00
IUUC-Cfa-021276	Canis familiaris	82.78	0.00e+00	1360.00
IUUC-Cre-022931	Chlamydomonas reinhardtii	35.46	2.00e-95	346.00
IUUC-Csa-023355	Chlorocebus sabaeus	82.61	0.00e+00	1359.00
IUUC-Cin-025784	Ciona intestinalis	53.95	0.00e+00	743.00
IUUC-Csv-026305	Ciona savignyi	47.67	0.00e+00	754.00
IUUC-Dre-028728	Danio rerio	78.49	0.00e+00	1343.00
IUUC-Dno-029055	Dasypus novemcinctus	80.07	0.00e+00	1377.00
IUUC-Dor-030628	Dipodomys ordii	82.08	0.00e+00	1352.00
IUUC-Dme-032093	Drosophila melanogaster	37.94	2.00e-121	430.00
IUUC-Eca-034266	Equus caballus	83.81	0.00e+00	1431.00
IUUC-Fca-035446	Felis catus	83.33	0.00e+00	1352.00
IUUC-Fal-036734	Ficedula albicollis	83.20	0.00e+00	1393.00
IUUC-Gmo-038689	Gadus morhua	73.07	0.00e+00	1274.00
IUUC-Gga-040934	Gallus gallus	87.11	0.00e+00	1080.00
IUUC-Gac-042476	Gasterosteus aculeatus	74.25	0.00e+00	1292.00
IUUC-Ggo-044828	Gorilla gorilla	82.51	0.00e+00	1418.00
IUUC-Hsa-045664	Homo sapiens	83.24	0.00e+00	1437.00
IUUC-Itr-048788	Ictidomys tridecemlineatus	60.00	0.00e+00	1010.00
IUUC-Loc-052823	Lepisosteus oculatus	86.65	0.00e+00	1439.00
IUUC-Laf-054164	Loxodonta africana	79.37	0.00e+00	1285.00
IUUC-Mcc-055810	Macaca mulatta	82.58	0.00e+00	1376.00
IUUC-Meu-056664	Macropus eugenii	65.79	0.00e+00	936.00
IUUC-Mga-059405	Meleagris gallopavo	85.37	0.00e+00	1399.00
IUUC-Mmr-061144	Microcebus murinus	85.68	0.00e+00	1405.00
IUUC-Mdo-062834	Monodelphis domestica	88.77	0.00e+00	1477.00
IUUC-Mmu-063955	Mus musculus	83.57	0.00e+00	1377.00
IUUC-Mpu-066240	Mustela putorius furo	82.97	0.00e+00	1331.00
IUUC-Mlu-067847	Myotis lucifugus	82.57	0.00e+00	1004.00
IUUC-Nle-069783	Nomascus leucogenys	82.70	0.00e+00	1395.00
IUUC-Opr-070409	Ochotona princeps	76.67	0.00e+00	1242.00
IUUC-Ont-072468	Oreochromis niloticus	78.42	0.00e+00	1358.00
IUUC-Oan-073315	Ornithorhynchus anatinus	82.91	0.00e+00	1360.00
IUUC-Ocu-074604	Oryctolagus cuniculus	84.53	0.00e+00	1167.00
IUUC-Ola-086734	Oryzias latipes	75.62	0.00e+00	1295.00
IUUC-Oga-089105	Otolemur garnettii	83.12	0.00e+00	1376.00
IUUC-Oar-090057	Ovis aries	83.74	0.00e+00	1391.00
IUUC-Ptr-091138	Pan troglodytes	83.35	0.00e+00	1437.00
IUUC-Pan-092691	Papio anubis	76.48	0.00e+00	1251.00
IUUC-Psi-093076	Pelodiscus sinensis	82.96	0.00e+00	1377.00
IUUC-Pma-094555	Petromyzon marinus	57.98	0.00e+00	824.00
IUUC-Pfo-096794	Poecilia formosa	72.71	0.00e+00	1233.00
IUUC-Pab-097787	Pongo abelii	82.58	0.00e+00	1419.00
IUUC-Pca-101070	Procavia capensis	59.75	0.00e+00	820.00
IUUC-Pva-102676	Pteropus vampyrus	81.38	0.00e+00	1329.00
IUUC-Rno-105971	Rattus norvegicus	75.61	0.00e+00	1181.00
IUUC-Sha-107530	Sarcophilus harrisii	85.17	0.00e+00	1382.00
IUUC-Ssc-116169	Sus scrofa	72.04	0.00e+00	923.00
IUUC-Tgu-117046	Taeniopygia guttata	86.03	0.00e+00	1375.00
IUUC-Tru-118596	Takifugu rubripes	74.26	0.00e+00	1286.00
IUUC-Tsy-119142	Tarsius syrichta	79.19	0.00e+00	1011.00
IUUC-Tni-120377	Tetraodon nigroviridis	75.94	0.00e+00	1300.00
IUUC-Tbe-127916	Tupaia belangeri	69.11	0.00e+00	896.00
IUUC-Ttr-129042	Tursiops truncatus	82.33	0.00e+00	1394.00
IUUC-Xtr-132117	Xenopus tropicalis	80.98	0.00e+00	1342.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence