iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000015922.1	ENSSHAT00000018913.1	ENSSHAP00000018758.1
ENSSHAG00000015922.1	ENSSHAT00000018914.1	ENSSHAP00000018759.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-18	66.8	538	568

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gHtd+ ++la  s+   ++++++D+ + +WD
   Q: 538  GHTDELWGLAIhSSkSQFLTCGHDKHVTLWD 568
           8**********966689************** PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

FSKYTYLVPE LSLLTFDLDD SASAASSMEV TDRIASLEQR VQMQEDDIQL LKSALADVVR 60
RLNITEEQQA MLNRKGPTKA RPLVQTLPLR TTVNNGTVLP KKSSGSLPSP SGARKETISP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAAGGCAGA TGGGAATTGT TGCTTGAACT CCCTGGGCGG GGATATTTGT GGCCAGGGCA 60
GCTGGAAATA TTCAGCCTTT CCCCCTGCAC TTTACTCACT GGAGAAGTTG CCTACAGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR024977--Apc4_WD40_dom
IPR005108--HELP
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:1990023--C:mitotic spindle midzone
GO:0097431--C:mitotic spindle pole
GO:0007420--P:brain development
GO:0002244--P:hematopoietic progenitor cell differentiation
GO:0007052--P:mitotic spindle organization
GO:0007405--P:neuroblast proliferation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002077	Ailuropoda melanoleuca	90.05	0.00e+00	1457.00
IUUC-Apl-004179	Anas platyrhynchos	94.33	0.00e+00	1476.00
IUUC-Aca-004993	Anolis carolinensis	88.60	0.00e+00	1409.00
IUUC-Ame-011332	Astyanax mexicanus	78.49	0.00e+00	1301.00
IUUC-Bta-013419	Bos taurus	78.23	0.00e+00	1199.00
IUUC-Cja-018976	Callithrix jacchus	92.13	0.00e+00	1475.00
IUUC-Cfa-021276	Canis familiaris	93.64	0.00e+00	1464.00
IUUC-Csa-023355	Chlorocebus sabaeus	92.29	0.00e+00	1456.00
IUUC-Cin-025784	Ciona intestinalis	55.61	0.00e+00	744.00
IUUC-Csv-026305	Ciona savignyi	48.72	0.00e+00	756.00
IUUC-Dre-028728	Danio rerio	77.42	0.00e+00	1282.00
IUUC-Dno-029055	Dasypus novemcinctus	90.60	0.00e+00	1489.00
IUUC-Dor-030628	Dipodomys ordii	90.81	0.00e+00	1429.00
IUUC-Dme-032093	Drosophila melanogaster	37.48	6.00e-118	418.00
IUUC-Ete-032845	Echinops telfairi	91.54	0.00e+00	798.00
IUUC-Eca-034266	Equus caballus	92.89	0.00e+00	1502.00
IUUC-Fca-035446	Felis catus	93.13	0.00e+00	1449.00
IUUC-Fal-036734	Ficedula albicollis	91.82	0.00e+00	1474.00
IUUC-Gmo-038689	Gadus morhua	73.66	0.00e+00	1242.00
IUUC-Gga-040934	Gallus gallus	93.88	0.00e+00	1135.00
IUUC-Gac-042476	Gasterosteus aculeatus	75.27	0.00e+00	1261.00
IUUC-Ggo-044828	Gorilla gorilla	91.79	0.00e+00	1486.00
IUUC-Hsa-045664	Homo sapiens	91.91	0.00e+00	1487.00
IUUC-Lch-050508	Latimeria chalumnae	85.87	0.00e+00	1406.00
IUUC-Loc-052823	Lepisosteus oculatus	82.45	0.00e+00	1347.00
IUUC-Laf-054164	Loxodonta africana	90.01	0.00e+00	1385.00
IUUC-Mcc-055810	Macaca mulatta	90.04	0.00e+00	1443.00
IUUC-Mga-059405	Meleagris gallopavo	90.88	0.00e+00	1459.00
IUUC-Mmr-061144	Microcebus murinus	93.28	0.00e+00	1469.00
IUUC-Mdo-062834	Monodelphis domestica	94.32	0.00e+00	1510.00
IUUC-Mmu-063955	Mus musculus	92.35	0.00e+00	1447.00
IUUC-Mpu-066240	Mustela putorius furo	92.49	0.00e+00	1427.00
IUUC-Mlu-067847	Myotis lucifugus	92.59	0.00e+00	1078.00
IUUC-Nle-069783	Nomascus leucogenys	91.52	0.00e+00	1467.00
IUUC-Opr-070409	Ochotona princeps	83.89	0.00e+00	1308.00
IUUC-Ont-072468	Oreochromis niloticus	77.97	0.00e+00	1291.00
IUUC-Oan-073315	Ornithorhynchus anatinus	93.76	0.00e+00	1466.00
IUUC-Ocu-074604	Oryctolagus cuniculus	91.58	0.00e+00	1206.00
IUUC-Ola-086734	Oryzias latipes	75.62	0.00e+00	1254.00
IUUC-Oga-089105	Otolemur garnettii	90.69	0.00e+00	1452.00
IUUC-Oar-090057	Ovis aries	93.71	0.00e+00	1481.00
IUUC-Ptr-091138	Pan troglodytes	91.67	0.00e+00	1483.00
IUUC-Pan-092691	Papio anubis	85.54	0.00e+00	1348.00
IUUC-Psi-093076	Pelodiscus sinensis	91.83	0.00e+00	1476.00
IUUC-Pma-094555	Petromyzon marinus	57.25	0.00e+00	821.00
IUUC-Pfo-096794	Poecilia formosa	74.26	0.00e+00	1234.00
IUUC-Pab-097787	Pongo abelii	89.67	0.00e+00	1455.00
IUUC-Pva-102676	Pteropus vampyrus	89.30	0.00e+00	1412.00
IUUC-Rno-105971	Rattus norvegicus	82.71	0.00e+00	1240.00
IUUC-Ssc-116169	Sus scrofa	78.61	0.00e+00	1003.00
IUUC-Tgu-117046	Taeniopygia guttata	94.39	0.00e+00	1463.00
IUUC-Tru-118596	Takifugu rubripes	74.18	0.00e+00	1254.00
IUUC-Tsy-119142	Tarsius syrichta	88.63	0.00e+00	1076.00
IUUC-Tni-120377	Tetraodon nigroviridis	76.72	0.00e+00	1267.00
IUUC-Tbe-127916	Tupaia belangeri	75.70	0.00e+00	958.00
IUUC-Ttr-129042	Tursiops truncatus	91.39	0.00e+00	1477.00
IUUC-Xtr-132117	Xenopus tropicalis	84.75	0.00e+00	1349.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence