iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115740

Ensembl Protein ID

ENSSSCP00000009035.2

UniProt Accession

F1S4U9; F1S4U9_PIG

Genbank Protein ID

ENSSSCP00000009035

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU571207

Gene Name

EML4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000008467.2	ENSSSCT00000009269.2	ENSSSCP00000009035.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-18	65.2	720	752

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH++ +t l++ ++ +++ s s+D  i  WD++
   Q: 720  GHSSYITHLDWsPEnKYIMSNSGDYEILYWDIK 752
           8***********888****************76 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

IPYFLYFIDD SISAASTSDV QDRLSALELR VQQQEDEITV LKAALADVLR RLAISEDHVA 60
SVKKSVPSKG QPGLREAISM SCITNGSGSN RKPSHTSSVS IARKETLSSA AKSGTEKKKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCCGTATT TTCTTTACTT TATAGATGAT AGTATTTCTG CTGCAAGTAC TTCTGATGTT 60
CAAGATCGCC TCTCAGCTCT TGAGTTAAGA GTTCAACAAC AAGAAGATGA AATCACTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR005108--HELP
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016020--C:membrane
GO:0015630--C:microtubule cytoskeleton
GO:0008017--F:microtubule binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001465	Ailuropoda melanoleuca	94.38	0.00e+00	1828.00
IUUC-Apl-003728	Anas platyrhynchos	87.95	0.00e+00	1343.00
IUUC-Aca-004921	Anolis carolinensis	76.48	0.00e+00	1450.00
IUUC-Ame-011846	Astyanax mexicanus	79.11	0.00e+00	1399.00
IUUC-Bta-013457	Bos taurus	94.91	0.00e+00	1809.00
IUUC-Cel-018623	Caenorhabditis elegans	28.66	4.00e-79	289.00
IUUC-Cja-019963	Callithrix jacchus	90.82	0.00e+00	1716.00
IUUC-Cfa-020344	Canis familiaris	94.59	0.00e+00	1801.00
IUUC-Cpo-022426	Cavia porcellus	91.10	0.00e+00	1696.00
IUUC-Csa-023822	Chlorocebus sabaeus	92.75	0.00e+00	1762.00
IUUC-Cho-024398	Choloepus hoffmanni	96.95	0.00e+00	751.00
IUUC-Cin-025784	Ciona intestinalis	48.78	0.00e+00	655.00
IUUC-Csv-026305	Ciona savignyi	48.54	0.00e+00	644.00
IUUC-Dno-029822	Dasypus novemcinctus	93.22	0.00e+00	1755.00
IUUC-Dor-030881	Dipodomys ordii	90.65	0.00e+00	892.00
IUUC-Dme-032093	Drosophila melanogaster	33.38	4.00e-104	372.00
IUUC-Ete-032548	Echinops telfairi	75.48	0.00e+00	1295.00
IUUC-Eca-033255	Equus caballus	93.77	0.00e+00	1821.00
IUUC-Eeu-034609	Erinaceus europaeus	83.69	4.00e-145	508.00
IUUC-Fca-035637	Felis catus	92.73	0.00e+00	1788.00
IUUC-Fal-037030	Ficedula albicollis	85.06	0.00e+00	1577.00
IUUC-Gmo-038662	Gadus morhua	79.66	0.00e+00	1232.00
IUUC-Gga-041202	Gallus gallus	87.66	0.00e+00	1609.00
IUUC-Gac-041394	Gasterosteus aculeatus	72.49	0.00e+00	1301.00
IUUC-Ggo-044734	Gorilla gorilla	92.54	0.00e+00	1724.00
IUUC-Hsa-046616	Homo sapiens	91.11	0.00e+00	1738.00
IUUC-Lch-050585	Latimeria chalumnae	76.63	0.00e+00	1437.00
IUUC-Loc-052753	Lepisosteus oculatus	80.86	0.00e+00	1417.00
IUUC-Laf-054189	Loxodonta africana	90.09	0.00e+00	1711.00
IUUC-Mcc-055697	Macaca mulatta	91.62	0.00e+00	1751.00
IUUC-Meu-056664	Macropus eugenii	54.88	0.00e+00	766.00
IUUC-Mmr-060888	Microcebus murinus	91.38	0.00e+00	1702.00
IUUC-Mdo-062025	Monodelphis domestica	85.24	0.00e+00	1507.00
IUUC-Mmu-063591	Mus musculus	88.27	0.00e+00	1714.00
IUUC-Mpu-065718	Mustela putorius furo	92.93	0.00e+00	1810.00
IUUC-Mlu-068068	Myotis lucifugus	94.40	0.00e+00	1816.00
IUUC-Nle-069281	Nomascus leucogenys	92.41	0.00e+00	1683.00
IUUC-Opr-070938	Ochotona princeps	69.29	0.00e+00	1212.00
IUUC-Ont-071488	Oreochromis niloticus	71.03	0.00e+00	1268.00
IUUC-Oan-073561	Ornithorhynchus anatinus	73.47	0.00e+00	990.00
IUUC-Ocu-074399	Oryctolagus cuniculus	92.67	0.00e+00	1744.00
IUUC-Ola-086551	Oryzias latipes	71.86	0.00e+00	1255.00
IUUC-Oga-088783	Otolemur garnettii	92.12	0.00e+00	1780.00
IUUC-Oar-089716	Ovis aries	95.02	0.00e+00	1788.00
IUUC-Ptr-090942	Pan troglodytes	88.79	0.00e+00	1673.00
IUUC-Pan-091831	Papio anubis	90.91	0.00e+00	1749.00
IUUC-Psi-093094	Pelodiscus sinensis	86.96	0.00e+00	1652.00
IUUC-Pma-094555	Petromyzon marinus	51.30	0.00e+00	712.00
IUUC-Pfo-097066	Poecilia formosa	68.33	0.00e+00	1233.00
IUUC-Pab-098351	Pongo abelii	92.54	0.00e+00	1724.00
IUUC-Pva-102783	Pteropus vampyrus	83.35	0.00e+00	1551.00
IUUC-Rno-105412	Rattus norvegicus	89.08	0.00e+00	1615.00
IUUC-Sha-106597	Sarcophilus harrisii	85.35	0.00e+00	1630.00
IUUC-Sar-113748	Sorex araneus	75.27	0.00e+00	1350.00
IUUC-Tgu-116696	Taeniopygia guttata	86.85	0.00e+00	1556.00
IUUC-Tru-118506	Takifugu rubripes	73.46	0.00e+00	1312.00
IUUC-Tsy-119375	Tarsius syrichta	82.74	0.00e+00	1545.00
IUUC-Tni-120392	Tetraodon nigroviridis	69.30	0.00e+00	1186.00
IUUC-Tbe-127468	Tupaia belangeri	86.63	0.00e+00	1603.00
IUUC-Ttr-128746	Tursiops truncatus	88.97	0.00e+00	1749.00
IUUC-Vpa-130697	Vicugna pacos	93.05	0.00e+00	1788.00
IUUC-Xtr-132731	Xenopus tropicalis	78.97	0.00e+00	1546.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence