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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-007275
Ensembl Protein ID AT1G14650.3
UniProt Accession Q8RXF1; Q0WWB5; Q9MA20; SF3A1_ARATH
Genbank Protein ID AAF63169.1; AEE29196.1; AEE29197.1; ANM61051.1; AAL91182.1; BAE98583.1
Protein Name Probable splicing factor 3A subunit 1
Genbank Nucleotide ID AC010657; CP002684; CP002684; CP002684; AY081293; AK226440
Gene Name At1g14650; T5E21.13
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G14650 AT1G14650.3 AT1G14650.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
Mentha
Protein 3D Structure
PDBMMDB
Post-translational Modifications (PTMs)
dbPPTdbPTMUniProt
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
ULD/UDP/UBQ/UBQ_Other 3.70e-06 27.6 720 780
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   ULD/UDP/UBQ/UBQ_Other
   S: 15   lkv.npsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekks 74
           + v + s++V+ LKeki ++  ip+++q+L  k   L+d+ +La+y++  g  + l ++++
   Q: 720  ITVqSLSENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRER 780
           44427788***********************9999*************8887777766666 PP
   
Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MFSSMQILPL EAPPTDGKLG PLPPSQLTDQ EVEERELQAE QNNSNLAPPA AVATHTRTIG 60
IIHPPPDIRT IVEKTAQFVS KNGLEFEKRI IVSNEKNAKF NFLKSSDPYH AFYQHKLTEY 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007275|ULD,UBQ_Other|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTGGATACGA AGTTTGGTTC ATAAATCCTA GGGCTCAATT TAATCTGTTT CATTAAAGAG 60
AGTATCTTCT TCTTCATTTT CCTTCTACTG TTAGTTCTAT CGACTTTCAT CAAATCGTCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007275|ULD,UBQ_Other|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0002--3D-structure
KW-0007--Acetylation
KW-0181--Complete proteome
KW-0507--mRNA processing
KW-0508--mRNA splicing
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0747--Spliceosome
Interpro

IPR022030--SF3A1
IPR000061--Surp
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
PROSITE

PS50128--SURP
PS50053--UBIQUITIN_2
Pfam

PF12230--PRP21_like_P
PF01805--Surp
PF00240--ubiquitin
SMART

SM00648--SWAP
SM00213--UBQ
Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005686--C:U2 snRNP
GO:0071004--C:U2-type prespliceosome
GO:0005684--C:U2-type spliceosomal complex
GO:0003723--F:RNA binding
GO:0000389--P:mRNA 3'-splice site recognition
GO:0000398--P:mRNA splicing, via spliceosome
GO:0000381--P:regulation of alternative mRNA splicing, via spliceosome
KEGG ath:AT1G14650
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000319 Aegilops tauschii 67.45 1.00e-129 456.00
IUUC-Aml-002416 Ailuropoda melanoleuca 44.40 1.00e-55 211.00
IUUC-Atr-003001 Amborella trichopoda 67.22 0.00e+00 659.00
IUUC-Apl-003584 Anas platyrhynchos 44.16 2.00e-46 179.00
IUUC-Aca-004690 Anolis carolinensis 44.04 8.00e-54 204.00
IUUC-Aly-005487 Arabidopsis lyrata 93.14 0.00e+00 1184.00
IUUC-Acl-008320 Aspergillus clavatus 38.08 3.00e-33 135.00
IUUC-Afl-008707 Aspergillus flavus 40.28 6.00e-43 167.00
IUUC-Afu-008786 Aspergillus fumigatus 35.11 8.00e-32 130.00
IUUC-Ani-009307 Aspergillus nidulans 38.65 4.00e-41 161.00
IUUC-Ang-009761 Aspergillus niger 39.50 2.00e-41 163.00
IUUC-Aor-010067 Aspergillus oryzae 40.28 6.00e-43 167.00
IUUC-Ate-010515 Aspergillus terreus 39.50 7.00e-44 171.00
IUUC-Ame-011842 Astyanax mexicanus 44.20 8.00e-55 207.00
IUUC-Bgr-012204 Blumeria graminis 36.04 7.00e-38 150.00
IUUC-Bta-013525 Bos taurus 44.77 1.00e-55 210.00
IUUC-Bci-013842 Botrytis cinerea 34.51 8.00e-31 127.00
IUUC-Bdi-014436 Brachypodium distachyon 66.47 5.00e-172 597.00
IUUC-Bol-015186 Brassica oleracea 83.44 0.00e+00 1058.00
IUUC-Bra-017856 Brassica rapa 87.14 0.00e+00 974.00
IUUC-Cel-018261 Caenorhabditis elegans 40.79 5.00e-48 185.00
IUUC-Cja-018989 Callithrix jacchus 44.40 1.00e-55 210.00
IUUC-Cfa-020629 Canis familiaris 44.40 1.00e-55 210.00
IUUC-Cpo-021759 Cavia porcellus 45.13 2.00e-55 209.00
IUUC-Cre-022603 Chlamydomonas reinhardtii 46.76 1.00e-27 116.00
IUUC-Csa-023750 Chlorocebus sabaeus 44.40 1.00e-55 211.00
IUUC-Cho-024581 Choloepus hoffmanni 43.58 1.00e-46 181.00
IUUC-Cin-025640 Ciona intestinalis 42.14 2.00e-52 200.00
IUUC-Csv-025855 Ciona savignyi 42.09 3.00e-54 206.00
IUUC-Cgl-026573 Colletotrichum gloeosporioides 35.44 5.00e-37 148.00
IUUC-Cne-026952 Cryptococcus neoformans 31.56 8.00e-49 187.00
IUUC-Dre-028055 Danio rerio 44.93 7.00e-48 184.00
IUUC-Dno-029259 Dasypus novemcinctus 44.40 8.00e-56 211.00
IUUC-Dor-031081 Dipodomys ordii 44.53 1.00e-55 210.00
IUUC-Dse-031438 Dothistroma septosporum 33.33 2.00e-37 150.00
IUUC-Dme-031975 Drosophila melanogaster 38.13 5.00e-67 248.00
IUUC-Ete-033177 Echinops telfairi 44.16 7.00e-53 201.00
IUUC-Eca-033670 Equus caballus 44.40 1.00e-55 210.00
IUUC-Eeu-035100 Erinaceus europaeus 38.34 7.00e-35 141.00
IUUC-Fca-036176 Felis catus 44.40 1.00e-55 210.00
IUUC-Fal-036776 Ficedula albicollis 44.12 2.00e-44 173.00
IUUC-Fox-037706 Fusarium oxysporum 34.25 7.00e-37 147.00
IUUC-Fso-038313 Fusarium solani 36.04 2.00e-36 145.00
IUUC-Gmo-038887 Gadus morhua 41.47 4.00e-54 205.00
IUUC-Ggr-039932 Gaeumannomyces graminis 33.33 1.00e-27 117.00
IUUC-Gga-041184 Gallus gallus 44.49 6.00e-46 178.00
IUUC-Gac-042118 Gasterosteus aculeatus 43.15 4.00e-50 192.00
IUUC-Gma-043382 Glycine max 71.29 0.00e+00 701.00
IUUC-Ggo-045641 Gorilla gorilla 44.40 1.00e-55 210.00
IUUC-Hsa-045751 Homo sapiens 44.40 1.00e-55 210.00
IUUC-Hvu-047702 Hordeum vulgare 68.59 3.00e-101 361.00
IUUC-Itr-047960 Ictidomys tridecemlineatus 44.40 1.00e-55 211.00
IUUC-Kpa-049400 Komagataella pastoris 28.03 2.00e-36 146.00
IUUC-Lch-050152 Latimeria chalumnae 43.77 4.00e-49 189.00
IUUC-Lpe-051570 Leersia perrieri 67.07 9.00e-158 550.00
IUUC-Loc-051753 Lepisosteus oculatus 44.20 2.00e-55 209.00
IUUC-Lma-053219 Leptosphaeria maculans 31.50 8.00e-28 117.00
IUUC-Laf-053643 Loxodonta africana 44.40 2.00e-55 210.00
IUUC-Mcc-055091 Macaca mulatta 44.40 1.00e-55 211.00
IUUC-Meu-056036 Macropus eugenii 41.24 2.00e-46 180.00
IUUC-Mor-057214 Magnaporthe oryzae 33.70 2.00e-28 119.00
IUUC-Mpo-057385 Magnaporthe poae 31.08 1.00e-06 46.20
IUUC-Mtr-057954 Medicago truncatula 73.18 0.00e+00 737.00
IUUC-Mla-059020 Melampsora laricipopulina 33.23 2.00e-33 137.00
IUUC-Mga-060176 Meleagris gallopavo 44.16 2.00e-46 180.00
IUUC-Mvi-060278 Microbotryum violaceum 31.92 9.00e-57 214.00
IUUC-Mmr-061602 Microcebus murinus 44.40 2.00e-55 210.00
IUUC-Mdo-062047 Monodelphis domestica 44.77 2.00e-55 210.00
IUUC-Mmu-063377 Mus musculus 44.40 7.00e-56 211.00
IUUC-Mac-065503 Musa acuminata 58.74 0.00e+00 780.00
IUUC-Mpu-066047 Mustela putorius furo 44.40 1.00e-55 211.00
IUUC-Mlu-067039 Myotis lucifugus 44.40 2.00e-55 210.00
IUUC-Nfi-068434 Neosartorya fischeri 36.43 1.00e-39 156.00
IUUC-Ncr-068912 Neurospora crassa 36.33 1.00e-35 143.00
IUUC-Nle-069540 Nomascus leucogenys 44.40 1.00e-55 211.00
IUUC-Opr-071157 Ochotona princeps 44.04 1.00e-53 204.00
IUUC-Ont-072229 Oreochromis niloticus 42.39 2.00e-53 203.00
IUUC-Oan-073616 Ornithorhynchus anatinus 54.00 2.00e-08 51.60
IUUC-Ocu-074002 Oryctolagus cuniculus 44.40 1.00e-55 210.00
IUUC-Oba-075659 Oryza barthii 70.83 2.00e-105 375.00
IUUC-Obr-076465 Oryza brachyantha 72.48 4.00e-135 474.00
IUUC-Ogl-077461 Oryza glaberrima 66.00 2.00e-161 562.00
IUUC-Ogu-078515 Oryza glumaepatula 66.53 9.00e-163 566.00
IUUC-Oin-080201 Oryza indica 66.00 5.00e-159 554.00
IUUC-Olo-080751 Oryza longistaminata 70.83 3.00e-105 375.00
IUUC-Ome-081201 Oryza meridionalis 66.33 6.00e-162 563.00
IUUC-Oni-082951 Oryza nivara 66.00 1.00e-158 552.00
IUUC-Opu-083560 Oryza punctata 66.27 6.00e-162 563.00
IUUC-Oru-084440 Oryza rufipogon 66.40 9.00e-163 566.00
IUUC-Osa-085699 Oryza sativa 66.00 2.00e-161 562.00
IUUC-Ola-086705 Oryzias latipes 40.86 2.00e-54 206.00
IUUC-Olu-087794 Ostreococcus lucimarinus 46.92 4.00e-97 348.00
IUUC-Oga-088896 Otolemur garnettii 44.40 1.00e-55 211.00
IUUC-Oar-090155 Ovis aries 44.77 1.00e-55 210.00
IUUC-Ptr-090754 Pan troglodytes 44.40 1.00e-55 210.00
IUUC-Pan-092464 Papio anubis 44.40 1.00e-55 211.00
IUUC-Psi-093166 Pelodiscus sinensis 44.04 1.00e-46 180.00
IUUC-Pma-094280 Petromyzon marinus 44.73 2.00e-56 213.00
IUUC-Pno-095106 Phaeosphaeria nodorum 31.18 7.00e-23 101.00
IUUC-Ppa-095510 Physcomitrella patens 58.32 1.00e-144 506.00
IUUC-Pfo-096212 Poecilia formosa 48.77 1.00e-28 121.00
IUUC-Pab-098482 Pongo abelii 44.40 1.00e-55 211.00
IUUC-Pop-098977 Populus trichocarpa 67.93 0.00e+00 813.00
IUUC-Pca-100776 Procavia capensis 42.06 2.00e-17 84.00
IUUC-Ppe-101595 Prunus persica 67.45 0.00e+00 836.00
IUUC-Pva-102981 Pteropus vampyrus 43.32 7.00e-47 181.00
IUUC-Pgr-103503 Puccinia graminis 28.79 2.00e-43 170.00
IUUC-Ptt-103994 Puccinia triticina 28.79 2.00e-40 160.00
IUUC-Pte-104226 Pyrenophora teres 31.14 2.00e-27 116.00
IUUC-Pyt-104732 Pyrenophora triticirepentis 31.23 1.00e-29 123.00
IUUC-Rno-105225 Rattus norvegicus 44.40 8.00e-56 211.00
IUUC-Sce-106278 Saccharomyces cerevisiae 22.13 2.00e-09 55.50
IUUC-Sha-107353 Sarcophilus harrisii 44.89 2.00e-55 210.00
IUUC-Sja-107876 Schizosaccharomyces japonicus 29.62 1.00e-44 173.00
IUUC-Spo-108266 Schizosaccharomyces pombe 36.69 6.00e-39 154.00
IUUC-Ssl-108518 Sclerotinia sclerotiorum 35.09 2.00e-39 156.00
IUUC-Smo-109675 Selaginella moellendorffii 56.93 2.00e-137 482.00
IUUC-Sit-110019 Setaria italica 64.65 2.00e-163 568.00
IUUC-Sly-111621 Solanum lycopersicum 72.56 3.00e-177 614.00
IUUC-Stu-112579 Solanum tuberosum 71.92 0.00e+00 660.00
IUUC-Sar-113166 Sorex araneus 40.43 7.00e-40 158.00
IUUC-Sbi-114746 Sorghum bicolor 58.41 6.00e-170 590.00
IUUC-Sre-115196 Sporisorium reilianum 27.74 3.00e-37 149.00
IUUC-Ssc-115512 Sus scrofa 44.40 1.00e-55 210.00
IUUC-Tgu-117284 Taeniopygia guttata 44.16 2.00e-46 180.00
IUUC-Tru-118236 Takifugu rubripes 42.18 5.00e-48 185.00
IUUC-Tsy-119219 Tarsius syrichta 40.43 3.00e-47 182.00
IUUC-Tni-119929 Tetraodon nigroviridis 37.99 1.00e-36 147.00
IUUC-Tca-121156 Theobroma cacao 65.92 0.00e+00 824.00
IUUC-Tre-122179 Trichoderma reesei 37.46 5.00e-36 144.00
IUUC-Tvi-122326 Trichoderma virens 36.40 3.00e-39 155.00
IUUC-Tae-124313 Triticum aestivum 58.53 3.00e-168 584.00
IUUC-Tur-126352 Triticum urartu 67.52 1.00e-130 459.00
IUUC-Tme-126996 Tuber melanosporum 36.13 3.00e-41 162.00
IUUC-Tbe-127271 Tupaia belangeri 40.43 4.00e-47 182.00
IUUC-Ttr-128433 Tursiops truncatus 44.40 1.00e-55 210.00
IUUC-Uma-129357 Ustilago maydis 27.77 2.00e-37 150.00
IUUC-Vda-130010 Verticillium dahliae 35.34 4.00e-35 141.00
IUUC-Vvi-131734 Vitis vinifera 73.01 0.00e+00 712.00
IUUC-Xtr-132013 Xenopus tropicalis 41.82 3.00e-55 209.00
IUUC-Xma-134244 Xiphophorus maculatus 42.47 3.00e-48 186.00
IUUC-Yli-134579 Yarrowia lipolytica 29.77 9.00e-32 130.00
IUUC-Zma-135716 Zea mays 58.46 0.00e+00 689.00
Created Date 25-Jun-2017

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