iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114746

Ensembl Protein ID

Sb03g010420.1

UniProt Accession

C5XGI9; C5XGI9_SORBI

Genbank Protein ID

EES00535.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G123000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g010420	Sb03g010420.1	Sb03g010420.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	1.30e-12	48.2	742	800

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 18   npsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekksgg 76
           + sdtV+ LKe+i ++l +p+++q+L ++   L+d+ tLa+y++ +g +i l+++++gg
   Q: 742  SLSDTVGSLKEQIAGELQLPANKQKLSVRTSFLKDNLTLAYYNVGPGVVINLTLRERGG 800
           7799**************************************************99875 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAAAMGTTIL TLPAPEGNGT GGGGGDDLQL QVASPKPPPP GAKADPPATV ATHTRTIGII 60
HPPPDIRVII EKTATFVAKN GPEFERRIIS HNQGNAKFNF LQPSDPYHAY YQHRVSEIGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCCATGGC TGCCGCCATG GGCACCACCA TCCTGACCCT CCCCGCACCG GAGGGCAACG 60
GCACTGGCGG CGGCGGCGGC GACGACCTGC AGCTGCAGGT GGCGTCGCCT AAGCCTCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR022030--SF3A1
IPR000061--Surp
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50128--SURP
PS50053--UBIQUITIN_2

Pfam

PF12230--PRP21_like_P
PF01805--Surp
PF00240--ubiquitin

SMART

SM00648--SWAP
SM00213--UBQ

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005686--C:U2 snRNP
GO:0071004--C:U2-type prespliceosome
GO:0003723--F:RNA binding
GO:0000389--P:mRNA 3'-splice site recognition
GO:0000381--P:regulation of alternative mRNA splicing, via spliceosome

KEGG

sbi:SORBI_03g010420

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000319	Aegilops tauschii	80.80	0.00e+00	800.00
IUUC-Aml-002416	Ailuropoda melanoleuca	45.78	2.00e-33	137.00
IUUC-Atr-003001	Amborella trichopoda	66.09	4.00e-170	590.00
IUUC-Apl-003584	Anas platyrhynchos	48.03	7.00e-28	118.00
IUUC-Aca-004690	Anolis carolinensis	47.37	4.00e-33	135.00
IUUC-Aly-005487	Arabidopsis lyrata	66.07	5.00e-167	580.00
IUUC-Ath-007275	Arabidopsis thaliana	66.40	5.00e-170	590.00
IUUC-Acl-008320	Aspergillus clavatus	44.85	4.00e-23	102.00
IUUC-Afl-008707	Aspergillus flavus	44.69	7.00e-30	124.00
IUUC-Afu-008786	Aspergillus fumigatus	44.09	2.00e-30	125.00
IUUC-Ani-009307	Aspergillus nidulans	44.92	6.00e-31	127.00
IUUC-Ang-009761	Aspergillus niger	45.78	6.00e-30	124.00
IUUC-Aor-010067	Aspergillus oryzae	44.69	7.00e-30	124.00
IUUC-Ate-010515	Aspergillus terreus	44.92	2.00e-30	126.00
IUUC-Ame-011842	Astyanax mexicanus	48.68	1.00e-33	137.00
IUUC-Bgr-012204	Blumeria graminis	33.88	3.00e-39	155.00
IUUC-Bta-013525	Bos taurus	45.78	2.00e-33	137.00
IUUC-Bci-013842	Botrytis cinerea	41.32	1.00e-25	110.00
IUUC-Bdi-014436	Brachypodium distachyon	80.47	0.00e+00	998.00
IUUC-Bol-015903	Brassica oleracea	59.13	0.00e+00	699.00
IUUC-Bra-017856	Brassica rapa	56.93	2.00e-176	611.00
IUUC-Cel-018261	Caenorhabditis elegans	33.83	2.00e-38	153.00
IUUC-Cja-018989	Callithrix jacchus	45.78	2.00e-33	136.00
IUUC-Cfa-020629	Canis familiaris	45.78	2.00e-33	137.00
IUUC-Cpo-021759	Cavia porcellus	45.78	2.00e-33	136.00
IUUC-Cre-022603	Chlamydomonas reinhardtii	46.48	3.00e-26	111.00
IUUC-Csa-023750	Chlorocebus sabaeus	45.78	2.00e-33	137.00
IUUC-Cho-024581	Choloepus hoffmanni	47.48	3.00e-30	126.00
IUUC-Cin-025640	Ciona intestinalis	44.64	2.00e-37	150.00
IUUC-Csv-025855	Ciona savignyi	34.83	1.00e-49	190.00
IUUC-Cgl-026573	Colletotrichum gloeosporioides	40.72	2.00e-24	106.00
IUUC-Cne-026952	Cryptococcus neoformans	38.46	8.00e-24	104.00
IUUC-Dre-028055	Danio rerio	46.39	4.00e-28	119.00
IUUC-Dno-029259	Dasypus novemcinctus	45.78	1.00e-33	137.00
IUUC-Dor-031081	Dipodomys ordii	47.37	1.00e-32	134.00
IUUC-Dse-031438	Dothistroma septosporum	47.62	7.00e-11	61.60
IUUC-Dme-031975	Drosophila melanogaster	36.14	9.00e-46	177.00
IUUC-Ete-033177	Echinops telfairi	46.39	2.00e-33	136.00
IUUC-Eca-033670	Equus caballus	45.78	2.00e-33	137.00
IUUC-Eeu-035100	Erinaceus europaeus	41.57	2.00e-26	113.00
IUUC-Fca-036176	Felis catus	45.78	2.00e-33	137.00
IUUC-Fal-036776	Ficedula albicollis	47.37	2.00e-26	114.00
IUUC-Fox-037706	Fusarium oxysporum	39.76	5.00e-23	101.00
IUUC-Fso-038313	Fusarium solani	42.77	9.00e-25	107.00
IUUC-Gmo-038887	Gadus morhua	44.58	7.00e-33	134.00
IUUC-Ggr-039932	Gaeumannomyces graminis	37.95	3.00e-22	99.00
IUUC-Gga-041184	Gallus gallus	48.03	7.00e-28	118.00
IUUC-Gac-042118	Gasterosteus aculeatus	45.18	9.00e-28	117.00
IUUC-Gma-043382	Glycine max	75.95	9.00e-149	520.00
IUUC-Ggo-045641	Gorilla gorilla	45.78	2.00e-33	137.00
IUUC-Hsa-045751	Homo sapiens	45.78	2.00e-33	137.00
IUUC-Hvu-047702	Hordeum vulgare	77.17	0.00e+00	705.00
IUUC-Itr-047960	Ictidomys tridecemlineatus	45.78	2.00e-33	137.00
IUUC-Kpa-049400	Komagataella pastoris	27.27	1.00e-23	103.00
IUUC-Lch-050152	Latimeria chalumnae	46.71	2.00e-27	116.00
IUUC-Lpe-051570	Leersia perrieri	87.41	3.00e-177	614.00
IUUC-Loc-051753	Lepisosteus oculatus	46.39	6.00e-34	138.00
IUUC-Lma-053219	Leptosphaeria maculans	37.68	7.00e-26	111.00
IUUC-Laf-053643	Loxodonta africana	48.03	4.00e-33	135.00
IUUC-Mcc-055091	Macaca mulatta	45.78	2.00e-33	137.00
IUUC-Meu-056036	Macropus eugenii	41.57	3.00e-26	113.00
IUUC-Mor-057214	Magnaporthe oryzae	38.55	7.00e-22	97.80
IUUC-Mpo-057385	Magnaporthe poae	32.43	5.00e-08	50.80
IUUC-Mtr-057954	Medicago truncatula	66.28	5.00e-180	623.00
IUUC-Mla-059020	Melampsora laricipopulina	35.36	1.00e-22	101.00
IUUC-Mga-060176	Meleagris gallopavo	48.03	7.00e-28	118.00
IUUC-Mvi-060278	Microbotryum violaceum	30.96	1.00e-39	157.00
IUUC-Mmr-061602	Microcebus murinus	45.78	3.00e-33	136.00
IUUC-Mdo-062047	Monodelphis domestica	45.78	3.00e-33	136.00
IUUC-Mmu-063377	Mus musculus	47.37	3.00e-33	135.00
IUUC-Mac-065503	Musa acuminata	62.61	0.00e+00	777.00
IUUC-Mpu-066047	Mustela putorius furo	45.78	2.00e-33	137.00
IUUC-Mlu-067039	Myotis lucifugus	45.78	2.00e-33	136.00
IUUC-Nfi-068434	Neosartorya fischeri	46.71	1.00e-28	120.00
IUUC-Ncr-068912	Neurospora crassa	37.95	1.00e-24	107.00
IUUC-Nle-069540	Nomascus leucogenys	45.78	2.00e-33	137.00
IUUC-Opr-071157	Ochotona princeps	45.78	2.00e-33	136.00
IUUC-Ont-072229	Oreochromis niloticus	47.37	6.00e-33	135.00
IUUC-Oan-073616	Ornithorhynchus anatinus	51.92	3.00e-09	53.90
IUUC-Ocu-074002	Oryctolagus cuniculus	45.78	2.00e-33	137.00
IUUC-Oba-075659	Oryza barthii	87.86	5.00e-149	520.00
IUUC-Obr-076465	Oryza brachyantha	88.80	0.00e+00	629.00
IUUC-Ogl-077461	Oryza glaberrima	82.94	0.00e+00	744.00
IUUC-Ogu-078515	Oryza glumaepatula	84.33	0.00e+00	740.00
IUUC-Oin-080201	Oryza indica	83.73	0.00e+00	732.00
IUUC-Olo-080751	Oryza longistaminata	87.54	4.00e-148	517.00
IUUC-Ome-081201	Oryza meridionalis	85.12	0.00e+00	749.00
IUUC-Oni-082951	Oryza nivara	83.73	0.00e+00	730.00
IUUC-Opu-083560	Oryza punctata	82.94	0.00e+00	731.00
IUUC-Oru-084440	Oryza rufipogon	83.33	0.00e+00	749.00
IUUC-Osa-085699	Oryza sativa	82.94	0.00e+00	744.00
IUUC-Ola-086705	Oryzias latipes	47.37	5.00e-33	135.00
IUUC-Olu-087794	Ostreococcus lucimarinus	47.42	1.00e-74	273.00
IUUC-Oga-088896	Otolemur garnettii	45.78	2.00e-33	137.00
IUUC-Oar-090155	Ovis aries	45.78	2.00e-33	137.00
IUUC-Ptr-090754	Pan troglodytes	45.78	2.00e-33	136.00
IUUC-Pan-092464	Papio anubis	45.78	2.00e-33	137.00
IUUC-Psi-093166	Pelodiscus sinensis	45.78	1.00e-27	117.00
IUUC-Pma-094280	Petromyzon marinus	46.00	3.00e-31	129.00
IUUC-Pno-095106	Phaeosphaeria nodorum	35.71	3.00e-18	85.90
IUUC-Ppa-095459	Physcomitrella patens	66.30	5.00e-122	431.00
IUUC-Pfo-096212	Poecilia formosa	47.37	2.00e-27	117.00
IUUC-Pab-098482	Pongo abelii	45.78	2.00e-33	137.00
IUUC-Pop-099479	Populus trichocarpa	65.45	4.00e-36	145.00
IUUC-Pca-100776	Procavia capensis	46.90	4.00e-20	92.80
IUUC-Ppe-101595	Prunus persica	72.75	2.00e-144	505.00
IUUC-Pva-102981	Pteropus vampyrus	47.14	1.00e-29	124.00
IUUC-Pgr-103503	Puccinia graminis	30.05	8.00e-33	135.00
IUUC-Ptt-103994	Puccinia triticina	30.98	1.00e-29	124.00
IUUC-Pte-104226	Pyrenophora teres	38.27	1.00e-24	107.00
IUUC-Pyt-104732	Pyrenophora triticirepentis	38.27	6.00e-25	108.00
IUUC-Rno-105225	Rattus norvegicus	47.37	4.00e-33	135.00
IUUC-Sce-106278	Saccharomyces cerevisiae	24.68	1.00e-05	42.70
IUUC-Sha-107353	Sarcophilus harrisii	45.78	2.00e-33	136.00
IUUC-Sja-107876	Schizosaccharomyces japonicus	29.24	9.00e-41	160.00
IUUC-Spo-108266	Schizosaccharomyces pombe	34.03	2.00e-40	159.00
IUUC-Ssl-108518	Sclerotinia sclerotiorum	43.11	1.00e-29	123.00
IUUC-Smo-108952	Selaginella moellendorffii	55.48	4.00e-103	368.00
IUUC-Sit-110019	Setaria italica	91.23	0.00e+00	812.00
IUUC-Sly-111653	Solanum lycopersicum	65.89	8.00e-160	556.00
IUUC-Stu-112703	Solanum tuberosum	66.13	1.00e-153	536.00
IUUC-Sar-113166	Sorex araneus	63.49	2.00e-21	96.70
IUUC-Sre-115196	Sporisorium reilianum	31.48	1.00e-32	134.00
IUUC-Ssc-115512	Sus scrofa	45.78	2.00e-33	136.00
IUUC-Tgu-117284	Taeniopygia guttata	48.03	7.00e-28	118.00
IUUC-Tru-118236	Takifugu rubripes	45.96	4.00e-27	115.00
IUUC-Tsy-119219	Tarsius syrichta	41.57	1.00e-26	114.00
IUUC-Tni-119929	Tetraodon nigroviridis	44.58	7.00e-34	137.00
IUUC-Tca-121156	Theobroma cacao	75.88	4.00e-148	517.00
IUUC-Tre-122179	Trichoderma reesei	33.56	3.00e-28	119.00
IUUC-Tvi-122326	Trichoderma virens	42.17	2.00e-25	109.00
IUUC-Tae-124733	Triticum aestivum	75.13	0.00e+00	771.00
IUUC-Tur-126352	Triticum urartu	81.75	0.00e+00	826.00
IUUC-Tme-126996	Tuber melanosporum	32.56	1.00e-40	159.00
IUUC-Tbe-127271	Tupaia belangeri	42.76	4.00e-26	112.00
IUUC-Ttr-128433	Tursiops truncatus	45.78	2.00e-33	137.00
IUUC-Uma-129357	Ustilago maydis	28.50	2.00e-32	133.00
IUUC-Vda-130010	Verticillium dahliae	40.96	7.00e-24	104.00
IUUC-Vvi-131734	Vitis vinifera	75.27	2.00e-146	512.00
IUUC-Xtr-132013	Xenopus tropicalis	42.77	1.00e-33	137.00
IUUC-Xma-134244	Xiphophorus maculatus	47.37	3.00e-27	116.00
IUUC-Yli-134579	Yarrowia lipolytica	29.07	4.00e-23	101.00
IUUC-Zma-135716	Zea mays	91.35	0.00e+00	1149.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence