iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099371

Ensembl Protein ID

POPTR_0017s07490.1

UniProt Accession

B9IJA8; B9IJA8_POPTR

Genbank Protein ID

EEF03873.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000353

Gene Name

HAF901; POPTR_0017s07490g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0017s07490	POPTR_0017s07490.1	POPTR_0017s07490.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	2.20e-08	35.0	579	653

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgseltlkvnpsdtVaeLKekiekklgip.peqqrLiykGkiLeddktLadyglkdgstihllekks 74
           +++++ksl g+  +++v+  +tV+ +K k +kkl +  +e +++ y  k+Led+ +La+ +++++s +hl+++k 
   Q: 579  MKIILKSLGGKGSKVHVDAEETVSSVKAKASKKLDFKpSETVKIFYLRKELEDHMSLAAQNVQPNSLLHLVRTKI 653
           7899*******88************************899*******************************9986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MLLDYDAKAE DAVDYEDFDE QYEGPEIQGV SEEDYLLSKK NYILSESTLQ PPTSDNEDYD 60
EDVEEELEKE PVVSDKILEF QTASLTGQQD VGVVSGVGVE KSSQDDVELG SMDSESSDAK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGCTAG ATTATGATGC AAAGGCTGAA GATGCAGTTG ATTACGAAGA CTTTGATGAA 60
CAATACGAGG GGCCTGAGAT TCAAGGTGTT AGTGAGGAGG ACTACTTGTT GTCAAAAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0103--Bromodomain
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001487--Bromodomain
IPR018359--Bromodomain_CS
IPR022591--TFIID_sub1_DUF3591
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS00633--BROMODOMAIN_1
PS50014--BROMODOMAIN_2
PS50053--UBIQUITIN_2

Pfam

PF00439--Bromodomain
PF12157--DUF3591
PF00240--ubiquitin

PRINTS

PR00503--BROMODOMAIN

SMART

SM00297--BROMO
SM00213--UBQ

Gene Ontology

GO:0005669--C:transcription factor TFIID complex
GO:0004402--F:histone acetyltransferase activity
GO:0001129--F:RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0043565--F:sequence-specific DNA binding
GO:0017025--F:TBP-class protein binding
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter

KEGG

pop:POPTR_0017s07490g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006976	Arabidopsis thaliana	53.83	0.00e+00	1582.00
IUUC-Ago-007819	Ashbya gossypii	40.00	1.00e-07	50.80
IUUC-Acl-008194	Aspergillus clavatus	39.06	4.00e-07	48.90
IUUC-Afl-008546	Aspergillus flavus	39.06	4.00e-07	48.90
IUUC-Afu-009124	Aspergillus fumigatus	39.06	6.00e-07	48.10
IUUC-Ani-009432	Aspergillus nidulans	37.50	1.00e-05	43.90
IUUC-Aor-010076	Aspergillus oryzae	39.06	5.00e-07	48.50
IUUC-Bgr-012003	Blumeria graminis	37.50	8.00e-06	44.30
IUUC-Bol-015982	Brassica oleracea	53.04	0.00e+00	1559.00
IUUC-Bra-017875	Brassica rapa	52.84	0.00e+00	1550.00
IUUC-Cel-018283	Caenorhabditis elegans	36.67	7.00e-08	53.90
IUUC-Cin-025450	Ciona intestinalis	41.30	1.00e-13	70.90
IUUC-Cgl-026660	Colletotrichum gloeosporioides	37.50	1.00e-05	43.90
IUUC-Dse-031386	Dothistroma septosporum	40.98	1.00e-06	47.40
IUUC-Fox-037874	Fusarium oxysporum	35.94	1.00e-05	43.50
IUUC-Fso-038286	Fusarium solani	35.94	2.00e-05	43.50
IUUC-Gma-044209	Glycine max	59.96	0.00e+00	1784.00
IUUC-Hvu-047343	Hordeum vulgare	48.01	0.00e+00	660.00
IUUC-Kpa-049146	Komagataella pastoris	40.00	6.00e-07	48.10
IUUC-Lpe-051566	Leersia perrieri	47.73	0.00e+00	1281.00
IUUC-Mpo-057370	Magnaporthe poae	33.65	7.00e-11	62.80
IUUC-Mla-058950	Melampsora laricipopulina	37.70	9.00e-03	33.90
IUUC-Mvi-060295	Microbotryum violaceum	40.00	4.00e-06	46.20
IUUC-Mac-064798	Musa acuminata	49.84	0.00e+00	1482.00
IUUC-Nfi-068373	Neosartorya fischeri	38.46	4.00e-07	48.90
IUUC-Ncr-068652	Neurospora crassa	45.31	3.00e-08	52.40
IUUC-Oba-075663	Oryza barthii	48.68	0.00e+00	1279.00
IUUC-Obr-076214	Oryza brachyantha	48.80	0.00e+00	1324.00
IUUC-Ogl-077575	Oryza glaberrima	48.48	0.00e+00	1281.00
IUUC-Ogu-079017	Oryza glumaepatula	47.40	0.00e+00	1307.00
IUUC-Oin-079864	Oryza indica	49.02	0.00e+00	1154.00
IUUC-Olo-080777	Oryza longistaminata	48.59	0.00e+00	1151.00
IUUC-Ome-081474	Oryza meridionalis	48.03	0.00e+00	1332.00
IUUC-Oni-082068	Oryza nivara	48.13	0.00e+00	1324.00
IUUC-Opu-083274	Oryza punctata	49.59	0.00e+00	1319.00
IUUC-Oru-085067	Oryza rufipogon	47.81	0.00e+00	1308.00
IUUC-Pma-094160	Petromyzon marinus	37.66	3.00e-09	57.00
IUUC-Sce-106432	Saccharomyces cerevisiae	35.63	5.00e-09	55.10
IUUC-Spo-108273	Schizosaccharomyces pombe	41.67	2.00e-08	53.10
IUUC-Ssl-108545	Sclerotinia sclerotiorum	32.81	2.00e-04	39.70
IUUC-Smo-109033	Selaginella moellendorffii	48.34	0.00e+00	816.00
IUUC-Sit-110106	Setaria italica	44.36	0.00e+00	955.00
IUUC-Sly-111896	Solanum lycopersicum	57.72	0.00e+00	1686.00
IUUC-Sre-114915	Sporisorium reilianum	37.50	3.00e-06	47.00
IUUC-Tre-122112	Trichoderma reesei	37.50	5.00e-06	45.40
IUUC-Tvi-122536	Trichoderma virens	41.27	4.00e-07	48.90
IUUC-Tme-126963	Tuber melanosporum	35.48	1.00e-05	43.90
IUUC-Uma-129538	Ustilago maydis	37.50	1.00e-06	48.50
IUUC-Vda-129860	Verticillium dahliae	37.50	6.00e-06	44.70
IUUC-Vvi-131566	Vitis vinifera	64.95	0.00e+00	1835.00
IUUC-Yli-134345	Yarrowia lipolytica	30.67	2.00e-06	46.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence