iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058713

Ensembl Protein ID

KEH21499

UniProt Accession

A0A072TVG7; A0A072TVG7_MEDTR

Genbank Protein ID

KEH21499.1

Protein Name

RAD23 UV excision repair family protein

Genbank Nucleotide ID

CM001223

Gene Name

MTR_7g407040

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_7g407040	KEH21499	KEH21499

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.30e-25	89.3	144	186
ULD/UDP/UBQ/UBQ_PIM	1.20e-23	84.3	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           ++e+ ++q+ eMG   +dr+++++aLraa+nn+e+AveyL++g
   Q: 144  TLEPTIQQILEMGggsWDRDTVIRALRAAYNNPERAVEYLYSG 186
           579*************************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mk++vktlkg++fe++v+  dtv ++K++i+  +g   +p++qq LI++Gk+LkD+ttL+e+++ ++s+++++++k+k
   Q: 1    MKINVKTLKGTHFEIQVNLHDTVGDVKKNIEGAQGaavYPAAQQMLIHQGKVLKDETTLEENQVAENSFIVIMLSKNK 78
           99*************************************************************************986 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MKINVKTLKG THFEIQVNLH DTVGDVKKNI EGAQGAAVYP AAQQMLIHQG KVLKDETTLE 60
ENQVAENSFI VIMLSKNKVS SSGASAASAA PPAVQPASSL PPPLSTPQPL ASTVGQGESN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAATCATGTT TCAACAACGC ATAACCCCCT ACCATCTTCC GCCACGTGTC ACCAAATAAA 60
TTCAACAAAC TAACCCTCAC GGTGGTCTCG CTCACAGGCC ATAACTAATC AAGCAATATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

mtr:MTR_7g407040

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005486	Arabidopsis lyrata	65.44	1.00e-112	399.00
IUUC-Ame-011107	Astyanax mexicanus	47.37	6.00e-16	77.80
IUUC-Dor-030358	Dipodomys ordii	40.82	3.00e-32	131.00
IUUC-Dse-031336	Dothistroma septosporum	45.97	9.00e-20	90.50
IUUC-Ete-032583	Echinops telfairi	35.85	2.00e-18	86.30
IUUC-Eeu-034721	Erinaceus europaeus	36.99	2.00e-17	82.40
IUUC-Fox-037960	Fusarium oxysporum	47.54	1.00e-19	89.70
IUUC-Fso-038107	Fusarium solani	47.06	2.00e-18	86.30
IUUC-Gmo-039080	Gadus morhua	36.73	7.00e-28	117.00
IUUC-Ggr-040116	Gaeumannomyces graminis	47.15	2.00e-19	89.40
IUUC-Gga-040133	Gallus gallus	40.91	8.00e-24	103.00
IUUC-Gac-041621	Gasterosteus aculeatus	38.46	1.00e-31	129.00
IUUC-Gma-043331	Glycine max	66.31	1.00e-121	428.00
IUUC-Kpa-049314	Komagataella pastoris	34.63	8.00e-28	117.00
IUUC-Meu-056459	Macropus eugenii	42.80	2.00e-36	145.00
IUUC-Mpo-057609	Magnaporthe poae	46.40	1.00e-18	86.30
IUUC-Mga-060060	Meleagris gallopavo	25.15	3.60e-01	28.50
IUUC-Ncr-068685	Neurospora crassa	36.10	5.00e-28	117.00
IUUC-Pno-095064	Phaeosphaeria nodorum	35.53	5.00e-16	77.80
IUUC-Pop-099416	Populus trichocarpa	62.47	3.00e-121	427.00
IUUC-Pca-100348	Procavia capensis	41.56	2.00e-32	132.00
IUUC-Ppe-101830	Prunus persica	62.60	3.00e-106	377.00
IUUC-Pgr-103641	Puccinia graminis	35.40	4.00e-22	98.20
IUUC-Pte-104303	Pyrenophora teres	46.92	1.00e-21	96.70
IUUC-Pyt-104580	Pyrenophora triticirepentis	46.92	1.00e-21	96.70
IUUC-Sce-106214	Saccharomyces cerevisiae	32.59	5.00e-14	71.60
IUUC-Sha-106918	Sarcophilus harrisii	35.00	2.00e-38	152.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	40.82	2.00e-16	79.30
IUUC-Tre-121911	Trichoderma reesei	36.14	2.00e-25	108.00
IUUC-Tme-127092	Tuber melanosporum	36.57	1.00e-35	143.00
IUUC-Tbe-127603	Tupaia belangeri	48.15	5.00e-24	104.00
IUUC-Ttr-129232	Tursiops truncatus	41.15	2.00e-32	132.00
IUUC-Uma-129484	Ustilago maydis	50.88	2.00e-11	62.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence