iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093347

Ensembl Protein ID

ENSPSIP00000014873.1

UniProt Accession

K7G3L2; K7G3L2_PELSI

Genbank Protein ID

ENSPSIP00000014873

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01011291

Gene Name

RAD23A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000013229.1	ENSPSIT00000014944.1	ENSPSIP00000014873.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	6.80e-12	45.2	144	183
ULD/UDP/UBQ/UBQ_PIM	1.30e-16	60.3	1	57

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMGFdreealqaLraannnleaAveyLldg 41
           e+e +l ++++MG++re+++ aLra++nn+ +AveyLl+g
   Q: 144  EYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTG 183
           7899**********************************97 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 23   veelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksks 76
           v  lKeki++e+g   +p++ qkLIyaGkiL+Dd  ++e++i+++++v+++v+k+ks
   Q: 1    VRVLKEKIEAEKGkeaFPVSGQKLIYAGKILSDDVAIKEYKIDEKNFVVVMVTKTKS 57
           5679*************************************************9985 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

VRVLKEKIEA EKGKEAFPVS GQKLIYAGKI LSDDVAIKEY KIDEKNFVVV MVTKTKSSSG 60
APAPAPGDAA PASAPEPAPS AGQPPAPAAG SDAILSPPAA PSEDKPPEEP AVLPLPECTT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGCGGGTCC TCAAGGAGAA GATCGAGGCG GAGAAAGGCA AGGAGGCATT CCCCGTGTCG 60
GGCCAGAAGC TGATCTACGC TGGCAAGATC CTGAGCGACG ACGTCGCCAT CAAGGAGTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA

Gene Ontology

GO:0005829--C:cytosol
GO:0005815--C:microtubule organizing center
GO:0005654--C:nucleoplasm
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0045070--P:positive regulation of viral genome replication
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001515	Ailuropoda melanoleuca	70.59	6.00e-95	340.00
IUUC-Aca-004704	Anolis carolinensis	69.36	9.00e-84	303.00
IUUC-Ago-007830	Ashbya gossypii	32.52	3.00e-14	72.40
IUUC-Bgr-012056	Blumeria graminis	33.80	3.00e-22	99.00
IUUC-Bta-012377	Bos taurus	67.35	5.00e-92	330.00
IUUC-Cja-018946	Callithrix jacchus	70.10	1.00e-89	323.00
IUUC-Cfa-020577	Canis familiaris	67.65	3.00e-96	344.00
IUUC-Cpo-021850	Cavia porcellus	66.67	2.00e-101	361.00
IUUC-Csa-023183	Chlorocebus sabaeus	66.28	3.00e-91	328.00
IUUC-Csv-025823	Ciona savignyi	39.53	7.00e-30	123.00
IUUC-Dre-028209	Danio rerio	55.82	3.00e-75	275.00
IUUC-Dno-030017	Dasypus novemcinctus	68.24	4.00e-90	324.00
IUUC-Dor-030358	Dipodomys ordii	83.07	4.00e-66	244.00
IUUC-Eca-033599	Equus caballus	68.55	3.00e-92	331.00
IUUC-Fca-036051	Felis catus	66.47	2.00e-93	335.00
IUUC-Fox-037960	Fusarium oxysporum	37.84	1.00e-16	80.50
IUUC-Fso-038107	Fusarium solani	37.30	6.00e-18	84.70
IUUC-Gga-040133	Gallus gallus	82.81	5.00e-55	207.00
IUUC-Ggo-045084	Gorilla gorilla	67.45	3.00e-94	338.00
IUUC-Hsa-046614	Homo sapiens	67.74	1.00e-94	338.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	71.85	8.00e-99	353.00
IUUC-Lch-050563	Latimeria chalumnae	54.64	1.00e-69	256.00
IUUC-Loc-051758	Lepisosteus oculatus	60.24	9.00e-77	280.00
IUUC-Lma-053328	Leptosphaeria maculans	56.86	3.00e-09	52.40
IUUC-Laf-054589	Loxodonta africana	67.16	6.00e-88	317.00
IUUC-Mcc-055860	Macaca mulatta	66.28	3.00e-91	328.00
IUUC-Meu-056459	Macropus eugenii	86.98	1.00e-80	292.00
IUUC-Mor-057287	Magnaporthe oryzae	33.87	3.00e-15	75.90
IUUC-Mmr-060819	Microcebus murinus	67.94	6.00e-98	350.00
IUUC-Mdo-062742	Monodelphis domestica	74.45	1.00e-109	389.00
IUUC-Mmu-063929	Mus musculus	68.62	8.00e-96	343.00
IUUC-Mpu-066684	Mustela putorius furo	67.74	7.00e-96	343.00
IUUC-Mlu-067787	Myotis lucifugus	71.18	2.00e-92	332.00
IUUC-Nle-069846	Nomascus leucogenys	57.98	1.00e-74	273.00
IUUC-Ont-072271	Oreochromis niloticus	52.75	1.00e-64	239.00
IUUC-Oan-073572	Ornithorhynchus anatinus	69.12	1.00e-100	359.00
IUUC-Ocu-074968	Oryctolagus cuniculus	65.24	2.00e-71	263.00
IUUC-Ogu-078023	Oryza glumaepatula	32.84	6.00e-31	128.00
IUUC-Ola-086474	Oryzias latipes	57.31	9.00e-59	219.00
IUUC-Oga-089075	Otolemur garnettii	69.12	2.00e-90	325.00
IUUC-Oar-090387	Ovis aries	65.40	4.00e-87	314.00
IUUC-Ptr-090912	Pan troglodytes	70.59	2.00e-94	338.00
IUUC-Pan-092140	Papio anubis	81.16	1.00e-70	259.00
IUUC-Pfo-096607	Poecilia formosa	61.06	5.00e-73	267.00
IUUC-Pab-097738	Pongo abelii	68.33	2.00e-96	345.00
IUUC-Pca-100348	Procavia capensis	71.60	4.00e-92	330.00
IUUC-Pva-102412	Pteropus vampyrus	70.29	3.00e-96	344.00
IUUC-Rno-105569	Rattus norvegicus	68.24	4.00e-96	344.00
IUUC-Sha-106918	Sarcophilus harrisii	77.02	3.00e-103	367.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	36.26	2.00e-17	83.20
IUUC-Smo-109129	Selaginella moellendorffii	32.67	3.00e-28	119.00
IUUC-Ssc-115460	Sus scrofa	68.04	1.00e-95	342.00
IUUC-Tsy-119385	Tarsius syrichta	80.00	5.00e-24	103.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence