iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-091165

Ensembl Protein ID

ENSPTRP00000038891.5

UniProt Accession

H2QZE6; H2QZE6_PANTR

Genbank Protein ID

ENSPTRP00000038891

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03068526

Gene Name

RAD23B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000021229.6	ENSPTRT00000048320.5	ENSPTRP00000038891.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.50e-19	69.4	168	205
ULD/UDP/UBQ/UBQ_PIM	1.20e-17	63.6	1	56

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e ++ ++++MG++re+++ aLra++nn+++AveyLl 
   Q: 168  YENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLM 205
           5789********************************95 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 23   veelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           v++lKeki++e+g   +p++ qkLIyaGkiL+Ddt L+e++i+++++v+++v+k+k
   Q: 1    VKALKEKIESEKGkdaFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKPK 56
           899**************************************************997 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

VKALKEKIES EKGKDAFPVA GQKLIYAGKI LNDDTALKEY KIDEKNFVVV MVTKPKAVST 60
PAPATTQQSA PASTTAVTCS TTTTVAQAPI PVPALAPTST PASITPASAT ASSEPAPASA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTGGGGGAG GGAGACGTAG GCGTCACCAC TACCCCAGTG TGGACCTGGT TAGCCGCTTA 60
GTTCCCAGAG TTGGTAACCC GAGAAGATGA GCCTTAAGAA AAAAAAAAGT ATCAGGTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0071942--C:XPC complex
GO:0003684--F:damaged DNA binding
GO:0000715--P:nucleotide-excision repair, DNA damage recognition
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0007283--P:spermatogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001195	Ailuropoda melanoleuca	94.40	3.00e-95	341.00
IUUC-Atr-003116	Amborella trichopoda	36.58	6.00e-31	128.00
IUUC-Apl-003371	Anas platyrhynchos	74.35	2.00e-121	428.00
IUUC-Aca-004599	Anolis carolinensis	81.66	6.00e-94	337.00
IUUC-Aly-006159	Arabidopsis lyrata	33.92	2.00e-49	189.00
IUUC-Ath-006676	Arabidopsis thaliana	39.84	2.00e-40	159.00
IUUC-Ago-007830	Ashbya gossypii	31.12	4.00e-19	89.00
IUUC-Acl-008212	Aspergillus clavatus	47.01	5.00e-19	88.60
IUUC-Afl-008605	Aspergillus flavus	44.12	1.00e-19	90.90
IUUC-Afu-008877	Aspergillus fumigatus	46.27	1.00e-18	87.00
IUUC-Aor-010032	Aspergillus oryzae	44.12	2.00e-19	89.70
IUUC-Ate-010458	Aspergillus terreus	40.73	9.00e-30	124.00
IUUC-Ame-011107	Astyanax mexicanus	67.96	7.00e-34	137.00
IUUC-Bta-012922	Bos taurus	92.76	1.00e-119	422.00
IUUC-Bci-013933	Botrytis cinerea	49.25	2.00e-19	89.70
IUUC-Bdi-014253	Brachypodium distachyon	36.65	2.00e-32	132.00
IUUC-Cja-018772	Callithrix jacchus	97.16	9.00e-131	459.00
IUUC-Cfa-020683	Canis familiaris	82.17	2.00e-125	441.00
IUUC-Cpo-022145	Cavia porcellus	91.73	3.00e-127	448.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	36.87	1.00e-29	123.00
IUUC-Csa-023714	Chlorocebus sabaeus	98.71	5.00e-147	513.00
IUUC-Cho-024814	Choloepus hoffmanni	73.33	2.00e-84	305.00
IUUC-Cin-025741	Ciona intestinalis	41.28	5.00e-36	144.00
IUUC-Csv-025823	Ciona savignyi	38.49	3.00e-32	131.00
IUUC-Cne-027056	Cryptococcus neoformans	58.70	5.00e-11	62.00
IUUC-Cme-027260	Cyanidioschyzon merolae	27.88	3.00e-24	105.00
IUUC-Dre-028369	Danio rerio	72.40	5.00e-83	300.00
IUUC-Dno-029543	Dasypus novemcinctus	90.44	2.00e-124	438.00
IUUC-Dse-031336	Dothistroma septosporum	47.41	9.00e-18	84.30
IUUC-Dme-032027	Drosophila melanogaster	36.07	1.00e-56	213.00
IUUC-Ete-032583	Echinops telfairi	84.75	4.00e-93	334.00
IUUC-Eca-034243	Equus caballus	98.72	8.00e-94	337.00
IUUC-Eeu-034721	Erinaceus europaeus	88.99	1.00e-73	269.00
IUUC-Fca-035679	Felis catus	93.02	3.00e-123	434.00
IUUC-Fal-037148	Ficedula albicollis	73.52	5.00e-119	420.00
IUUC-Fox-037960	Fusarium oxysporum	43.28	1.00e-15	77.40
IUUC-Ggr-040116	Gaeumannomyces graminis	46.27	5.00e-16	78.60
IUUC-Gga-040544	Gallus gallus	72.75	3.00e-125	441.00
IUUC-Gac-042239	Gasterosteus aculeatus	55.25	8.00e-88	317.00
IUUC-Gma-043835	Glycine max	35.85	4.00e-39	155.00
IUUC-Ggo-045125	Gorilla gorilla	100.00	3.00e-105	374.00
IUUC-Hsa-046519	Homo sapiens	100.00	3.00e-105	374.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	91.21	4.00e-117	414.00
IUUC-Kpa-049314	Komagataella pastoris	37.66	3.00e-30	125.00
IUUC-Lch-050553	Latimeria chalumnae	68.21	5.00e-100	357.00
IUUC-Lpe-050801	Leersia perrieri	37.19	2.00e-34	139.00
IUUC-Loc-051748	Lepisosteus oculatus	68.52	2.00e-75	275.00
IUUC-Lma-053328	Leptosphaeria maculans	52.94	3.00e-09	52.80
IUUC-Laf-054293	Loxodonta africana	94.57	2.00e-124	438.00
IUUC-Mcc-055600	Macaca mulatta	100.00	2.00e-113	402.00
IUUC-Meu-056082	Macropus eugenii	66.55	3.00e-70	258.00
IUUC-Mor-057287	Magnaporthe oryzae	46.77	1.00e-14	73.90
IUUC-Mpo-057609	Magnaporthe poae	46.51	3.00e-15	75.50
IUUC-Mtr-058148	Medicago truncatula	38.22	2.00e-40	159.00
IUUC-Mla-058961	Melampsora laricipopulina	46.62	4.00e-26	112.00
IUUC-Mga-060060	Meleagris gallopavo	47.88	3.00e-29	122.00
IUUC-Mvi-060220	Microbotryum violaceum	43.61	2.00e-21	97.40
IUUC-Mmr-061159	Microcebus murinus	97.52	1.00e-98	352.00
IUUC-Mdo-061967	Monodelphis domestica	82.56	5.00e-111	394.00
IUUC-Mmu-063258	Mus musculus	86.84	1.00e-135	476.00
IUUC-Mac-065180	Musa acuminata	33.17	1.00e-42	167.00
IUUC-Mpu-066389	Mustela putorius furo	94.80	1.00e-95	343.00
IUUC-Mlu-067999	Myotis lucifugus	89.72	3.00e-119	421.00
IUUC-Nfi-068390	Neosartorya fischeri	46.27	1.00e-18	87.00
IUUC-Ncr-068685	Neurospora crassa	44.78	3.00e-24	105.00
IUUC-Nle-069655	Nomascus leucogenys	98.71	2.00e-142	498.00
IUUC-Opr-070234	Ochotona princeps	83.33	6.00e-30	124.00
IUUC-Ont-072484	Oreochromis niloticus	54.24	1.00e-93	336.00
IUUC-Ocu-074831	Oryctolagus cuniculus	82.73	1.00e-120	426.00
IUUC-Ogl-077067	Oryza glaberrima	33.17	2.00e-47	182.00
IUUC-Ogu-078101	Oryza glumaepatula	35.88	1.00e-34	140.00
IUUC-Oin-079203	Oryza indica	33.25	3.00e-47	182.00
IUUC-Ome-081652	Oryza meridionalis	35.88	9.00e-35	140.00
IUUC-Opu-083789	Oryza punctata	35.82	4.00e-35	142.00
IUUC-Osa-085951	Oryza sativa	33.25	3.00e-47	182.00
IUUC-Ola-086540	Oryzias latipes	61.94	5.00e-64	238.00
IUUC-Olu-087843	Ostreococcus lucimarinus	42.79	1.00e-38	154.00
IUUC-Oga-088023	Otolemur garnettii	88.24	2.00e-124	438.00
IUUC-Oar-089964	Ovis aries	92.25	7.00e-118	416.00
IUUC-Pan-092009	Papio anubis	97.95	1.00e-140	492.00
IUUC-Psi-093477	Pelodiscus sinensis	78.73	7.00e-111	393.00
IUUC-Pno-095064	Phaeosphaeria nodorum	47.11	3.00e-13	69.70
IUUC-Ppa-095964	Physcomitrella patens	43.61	1.00e-27	117.00
IUUC-Pfo-097385	Poecilia formosa	57.03	1.00e-90	326.00
IUUC-Pab-097868	Pongo abelii	100.00	2.00e-104	371.00
IUUC-Pop-099642	Populus trichocarpa	35.15	4.00e-49	188.00
IUUC-Pca-100652	Procavia capensis	97.00	1.00e-70	259.00
IUUC-Pva-102137	Pteropus vampyrus	98.77	4.00e-99	354.00
IUUC-Ptt-103717	Puccinia triticina	45.93	2.00e-25	110.00
IUUC-Pte-104303	Pyrenophora teres	50.00	7.00e-20	91.30
IUUC-Pyt-104580	Pyrenophora triticirepentis	50.00	1.00e-19	90.90
IUUC-Rno-104844	Rattus norvegicus	87.56	1.00e-137	482.00
IUUC-Sce-106214	Saccharomyces cerevisiae	35.77	6.00e-13	68.60
IUUC-Sha-107073	Sarcophilus harrisii	84.87	1.00e-109	389.00
IUUC-Spo-108298	Schizosaccharomyces pombe	42.04	8.00e-38	150.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	43.75	7.00e-17	81.30
IUUC-Stu-112054	Solanum tuberosum	33.65	4.00e-49	188.00
IUUC-Sar-112925	Sorex araneus	87.64	3.00e-90	325.00
IUUC-Sre-114894	Sporisorium reilianum	51.61	4.00e-11	62.40
IUUC-Ssc-116329	Sus scrofa	94.57	2.00e-124	439.00
IUUC-Tgu-116918	Taeniopygia guttata	74.55	2.00e-120	425.00
IUUC-Tru-118651	Takifugu rubripes	60.77	2.00e-73	269.00
IUUC-Tsy-118836	Tarsius syrichta	99.26	4.00e-49	188.00
IUUC-Tca-121594	Theobroma cacao	34.76	9.00e-46	177.00
IUUC-Tvi-122617	Trichoderma virens	46.51	2.00e-16	79.70
IUUC-Tme-127092	Tuber melanosporum	51.49	1.00e-20	94.00
IUUC-Tbe-127493	Tupaia belangeri	83.70	3.00e-72	265.00
IUUC-Ttr-128464	Tursiops truncatus	97.74	6.00e-101	360.00
IUUC-Uma-129484	Ustilago maydis	47.54	1.00e-11	64.30
IUUC-Vda-129946	Verticillium dahliae	47.01	1.00e-17	83.60
IUUC-Vpa-130357	Vicugna pacos	89.43	2.00e-89	322.00
IUUC-Vvi-131039	Vitis vinifera	37.65	1.00e-39	157.00
IUUC-Xtr-132679	Xenopus tropicalis	71.11	5.00e-97	347.00
IUUC-Xma-133503	Xiphophorus maculatus	54.48	1.00e-93	336.00
IUUC-Yli-134615	Yarrowia lipolytica	41.67	3.00e-36	145.00
IUUC-Zma-135929	Zea mays	29.78	3.00e-44	172.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence