iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113916

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768

Gene Name

SORBI_009G231900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g028460	Sb09g028460.1	Sb09g028460.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	50.23	1.00e-63	239.00	IUUC-Ath-007424
E3 activity/RING/RING	30.56	7.00e-08	55.10	IUUC-Hsa-046704
E3 activity/RING/RING	28.21	2.00e-05	43.90	IUUC-Sce-106198

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MTSMATKLVN TAEVASSEAQ TLVADMRKAI NTMKSLAVDF ERNGKSDKVN KLEEMVQEMV 60
ASYEDCAAMA QAIKAVPVVY QPSDQPTDFK TLIEVEVSKI KGASSASQQN HPLLRQFRES 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACGTCGA TGGCCACGAA GCTCGTGAAC ACCGCCGAGG TCGCCTCATC GGAGGCGCAA 60
ACCCTAGTCG CGGTAAACCC CCTCCGCCGC CCACCTCTCT TCCTCCCCTT CCGCACCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR026846--Nse2(Mms21)
IPR004181--Znf_MIZ
IPR013083--Znf_RING/FYVE/PHD

Pfam

PF11789--zf-Nse

Gene Ontology

GO:0005634--C:nucleus
GO:0030915--C:Smc5-Smc6 complex
GO:0019789--F:SUMO transferase activity
GO:0008270--F:zinc ion binding
GO:0000724--P:double-strand break repair via homologous recombination
GO:0060250--P:germ-line stem-cell niche homeostasis
GO:0032876--P:negative regulation of DNA endoreduplication
GO:0008284--P:positive regulation of cell proliferation
GO:0080038--P:positive regulation of cytokinin-activated signaling pathway
GO:0045931--P:positive regulation of mitotic cell cycle
GO:0010082--P:regulation of root meristem growth

KEGG

sbi:SORBI_09g028460

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000276	Aegilops tauschii	63.24	7.00e-73	265.00
IUUC-Atr-002438	Amborella trichopoda	52.91	6.00e-56	209.00
IUUC-Apl-004091	Anas platyrhynchos	37.88	3.00e-03	32.30
IUUC-Aca-004433	Anolis carolinensis	33.04	3.00e-08	51.20
IUUC-Aly-006133	Arabidopsis lyrata	50.45	5.00e-65	239.00
IUUC-Ath-007424	Arabidopsis thaliana	50.23	6.00e-65	239.00
IUUC-Ame-010902	Astyanax mexicanus	25.89	2.00e-10	58.20
IUUC-Bgr-012088	Blumeria graminis	25.00	2.00e-03	35.80
IUUC-Bdi-014403	Brachypodium distachyon	61.37	4.00e-87	313.00
IUUC-Bol-015454	Brassica oleracea	51.39	2.00e-67	247.00
IUUC-Bra-017093	Brassica rapa	42.19	2.00e-54	205.00
IUUC-Cel-018588	Caenorhabditis elegans	24.07	1.00e-04	38.50
IUUC-Cin-025127	Ciona intestinalis	19.41	1.00e-06	45.40
IUUC-Cme-027175	Cyanidioschyzon merolae	31.67	5.00e-04	37.70
IUUC-Dre-028325	Danio rerio	30.77	3.00e-07	47.80
IUUC-Dse-031273	Dothistroma septosporum	28.95	2.00e-05	42.70
IUUC-Dme-031933	Drosophila melanogaster	34.72	2.00e-08	51.60
IUUC-Eca-034371	Equus caballus	28.67	6.00e-09	53.50
IUUC-Fal-037038	Ficedula albicollis	29.75	3.00e-07	47.80
IUUC-Fox-037843	Fusarium oxysporum	30.77	4.00e-07	48.10
IUUC-Fso-038272	Fusarium solani	31.82	3.00e-06	45.40
IUUC-Gga-040737	Gallus gallus	38.64	2.00e-02	32.00
IUUC-Gac-042591	Gasterosteus aculeatus	32.84	5.00e-10	57.00
IUUC-Gma-043177	Glycine max	51.87	4.00e-64	237.00
IUUC-Ggo-045206	Gorilla gorilla	35.63	1.00e-07	49.30
IUUC-Hsa-046704	Homo sapiens	35.63	1.00e-07	49.30
IUUC-Hvu-047252	Hordeum vulgare	62.74	1.00e-82	298.00
IUUC-Kpa-049181	Komagataella pastoris	18.98	3.00e-05	41.60
IUUC-Lch-050495	Latimeria chalumnae	24.59	9.10e-02	32.00
IUUC-Lpe-051150	Leersia perrieri	59.45	4.00e-89	319.00
IUUC-Loc-052687	Lepisosteus oculatus	23.05	1.00e-08	52.80
IUUC-Lma-053255	Leptosphaeria maculans	22.73	2.00e-04	39.70
IUUC-Mor-057028	Magnaporthe oryzae	25.64	2.00e-06	45.80
IUUC-Mpo-057462	Magnaporthe poae	23.94	1.00e-03	37.40
IUUC-Mtr-058011	Medicago truncatula	41.36	5.00e-55	206.00
IUUC-Mdo-061863	Monodelphis domestica	23.48	8.00e-08	49.70
IUUC-Mac-065639	Musa acuminata	55.11	2.00e-68	251.00
IUUC-Ncr-068773	Neurospora crassa	29.03	5.00e-05	41.60
IUUC-Ont-071575	Oreochromis niloticus	30.30	3.00e-10	57.80
IUUC-Oba-075725	Oryza barthii	58.65	1.00e-77	281.00
IUUC-Obr-076506	Oryza brachyantha	63.09	2.00e-83	300.00
IUUC-Ogl-077564	Oryza glaberrima	65.70	6.00e-63	231.00
IUUC-Ogu-079018	Oryza glumaepatula	59.07	7.00e-78	282.00
IUUC-Oin-079792	Oryza indica	60.52	2.00e-80	290.00
IUUC-Olo-080864	Oryza longistaminata	49.02	9.00e-23	97.80
IUUC-Ome-081426	Oryza meridionalis	69.19	7.00e-77	278.00
IUUC-Oni-082286	Oryza nivara	59.49	1.00e-78	285.00
IUUC-Opu-083586	Oryza punctata	67.03	5.00e-74	269.00
IUUC-Oru-085158	Oryza rufipogon	59.49	1.00e-78	285.00
IUUC-Osa-085872	Oryza sativa	58.82	5.00e-23	98.60
IUUC-Olu-087903	Ostreococcus lucimarinus	45.83	2.00e-06	44.70
IUUC-Ptr-091582	Pan troglodytes	35.63	1.00e-07	49.30
IUUC-Psi-093714	Pelodiscus sinensis	25.11	2.00e-06	45.40
IUUC-Pma-094198	Petromyzon marinus	34.29	5.00e-12	62.40
IUUC-Pno-094931	Phaeosphaeria nodorum	26.09	7.00e-05	41.20
IUUC-Ppa-095570	Physcomitrella patens	37.38	7.00e-43	166.00
IUUC-Pab-098005	Pongo abelii	35.63	1.00e-07	49.30
IUUC-Pop-099559	Populus trichocarpa	57.67	8.00e-76	275.00
IUUC-Ppe-101873	Prunus persica	53.69	1.00e-67	248.00
IUUC-Pva-102951	Pteropus vampyrus	28.93	7.00e-06	43.10
IUUC-Pte-104390	Pyrenophora teres	24.63	3.00e-07	48.90
IUUC-Pyt-104633	Pyrenophora triticirepentis	22.58	1.00e-04	39.70
IUUC-Sce-106198	Saccharomyces cerevisiae	28.21	5.00e-06	43.90
IUUC-Sja-107983	Schizosaccharomyces japonicus	26.32	2.00e-09	55.10
IUUC-Spo-108327	Schizosaccharomyces pombe	27.01	3.00e-07	48.10
IUUC-Smo-109438	Selaginella moellendorffii	37.50	3.00e-39	154.00
IUUC-Sit-109919	Setaria italica	81.55	5.00e-113	399.00
IUUC-Sly-111667	Solanum lycopersicum	49.08	3.00e-65	240.00
IUUC-Stu-112211	Solanum tuberosum	48.85	1.00e-64	238.00
IUUC-Tgu-116472	Taeniopygia guttata	37.65	7.00e-07	46.60
IUUC-Tru-117771	Takifugu rubripes	24.22	9.00e-08	49.70
IUUC-Tni-119821	Tetraodon nigroviridis	25.12	3.00e-10	57.80
IUUC-Tca-121272	Theobroma cacao	55.07	2.00e-66	244.00
IUUC-Tre-122049	Trichoderma reesei	33.85	6.00e-07	47.80
IUUC-Tvi-122642	Trichoderma virens	30.51	2.00e-06	46.20
IUUC-Tae-122969	Triticum aestivum	65.28	7.00e-87	312.00
IUUC-Tur-126346	Triticum urartu	64.32	3.00e-73	266.00
IUUC-Tme-126988	Tuber melanosporum	28.57	5.00e-05	41.20
IUUC-Tbe-127676	Tupaia belangeri	34.62	6.00e-04	36.20
IUUC-Vvi-131486	Vitis vinifera	58.08	1.00e-68	251.00
IUUC-Yli-134676	Yarrowia lipolytica	30.77	2.00e-06	46.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence