iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016659

Ensembl Protein ID

Bra017415.1-P

UniProt Accession

M4DLN4; M4DLN4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra017415	Bra017415.1	Bra017415.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.40e-08	34.2	189	239

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +vC  Cg+++ +++  ++C+ C++wfH +C+k++   + +  +++ Cp+C++
   Q: 189  AVCGACGDSDGTDEFWICCDACEKWFHGKCVKIT-PAKAEHIKHYKCPSCSN 239
           578889999888899999999*************.888888888******86 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MEVITHPTPR TVDEVFTDFR GRRAGLIKAL TTDMVKFYQT CDPEKENLCL YGLPNETWEV 60
NLPVEEVPPE LPEPALGINF ARDGMQEKDW VSLVAVHSDS WLLSVAFYFG ARFGFGKNER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGTAA TCACTCATCC AACACCTCGA ACTGTCGATG AGGTCTTTAC TGACTTCAGA 60
GGTCGTCGAG CTGGTCTTAT CAAGGCTCTT ACTACCGGTC AGTTTTTGTC CTCCCTTAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002983	Amborella trichopoda	66.67	2.00e-80	291.00
IUUC-Aly-005868	Arabidopsis lyrata	79.92	8.00e-96	342.00
IUUC-Ath-007447	Arabidopsis thaliana	79.52	6.00e-96	343.00
IUUC-Acl-008106	Aspergillus clavatus	48.78	4.00e-06	46.60
IUUC-Afu-008783	Aspergillus fumigatus	51.22	1.00e-06	48.50
IUUC-Ani-009326	Aspergillus nidulans	52.78	5.00e-06	46.20
IUUC-Ang-009560	Aspergillus niger	54.05	4.00e-06	47.00
IUUC-Bdi-014599	Brachypodium distachyon	61.54	1.00e-74	272.00
IUUC-Bol-015206	Brassica oleracea	99.59	2.00e-114	404.00
IUUC-Csv-026156	Ciona savignyi	51.06	1.00e-08	54.70
IUUC-Fox-037812	Fusarium oxysporum	42.86	2.00e-05	43.10
IUUC-Ggr-039960	Gaeumannomyces graminis	50.00	2.00e-05	43.90
IUUC-Gma-043342	Glycine max	64.94	2.00e-78	284.00
IUUC-Meu-056467	Macropus eugenii	38.60	4.00e-04	41.20
IUUC-Mor-057044	Magnaporthe oryzae	47.50	7.00e-05	42.00
IUUC-Mpo-057588	Magnaporthe poae	50.00	2.00e-05	43.90
IUUC-Mtr-057868	Medicago truncatula	65.02	1.00e-79	288.00
IUUC-Mac-064462	Musa acuminata	60.66	2.00e-71	261.00
IUUC-Nfi-068438	Neosartorya fischeri	51.22	1.00e-06	48.50
IUUC-Ogl-077422	Oryza glaberrima	58.44	2.00e-62	231.00
IUUC-Oin-079801	Oryza indica	59.26	1.00e-62	232.00
IUUC-Olo-080963	Oryza longistaminata	45.93	1.00e-26	112.00
IUUC-Oni-082314	Oryza nivara	59.26	1.00e-62	232.00
IUUC-Oru-085108	Oryza rufipogon	57.61	7.00e-60	223.00
IUUC-Osa-085794	Oryza sativa	79.26	1.00e-51	196.00
IUUC-Olu-087829	Ostreococcus lucimarinus	65.65	2.00e-39	155.00
IUUC-Ppa-095899	Physcomitrella patens	64.92	2.00e-73	268.00
IUUC-Pop-099708	Populus trichocarpa	76.28	7.00e-98	349.00
IUUC-Ppe-101390	Prunus persica	65.85	1.00e-77	282.00
IUUC-Smo-109237	Selaginella moellendorffii	51.04	4.00e-52	197.00
IUUC-Sit-110822	Setaria italica	80.60	5.00e-52	197.00
IUUC-Sly-111877	Solanum lycopersicum	74.09	4.00e-88	317.00
IUUC-Stu-112822	Solanum tuberosum	72.06	7.00e-88	316.00
IUUC-Tca-121742	Theobroma cacao	75.00	9.00e-89	319.00
IUUC-Tre-122185	Trichoderma reesei	46.34	3.00e-05	42.70
IUUC-Tvi-122269	Trichoderma virens	46.34	7.00e-05	41.20
IUUC-Tae-125833	Triticum aestivum	60.61	1.00e-74	272.00
IUUC-Vvi-131388	Vitis vinifera	75.30	2.00e-89	321.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence