iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099974

Ensembl Protein ID

POPTR_0018s05470.1

UniProt Accession

U5FFQ7; U5FFQ7_POPTR

Genbank Protein ID

ERP49690.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000354

Gene Name

POPTR_0018s05470g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0018s05470	POPTR_0018s05470.1	POPTR_0018s05470.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.70e-08	35.6	115	165

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           + C  Cge++++++  ++C++C++wfH +C+k++     +  +++ Cp+C++
   Q: 115  TLCGACGENYASDEFWICCDICEKWFHGKCVKIT-PARAEHIKQYKCPSCSN 165
           68************99******************.666666677******86 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MQEKDWLSLV AVHSDAWLLS VAFYFGSRFG FDKADRKRLF SMINDLPTIF EVVTGTAKKQ 60
VKEKSSVSNH SSNKTKSNSK QRGSESQGKY SKAMQAKDED DEGLDEEDEE DHGETLCGAC 120

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Nucleotide Sequence
(Fasta)

TGCAGAGAAG GAGAATCTTT GCCTTTACGG ATTTCCTAGT GAGCAGTGGG AGGTCAATTT 60
ACCTGCTGAA GAGGTGCCTC CAGAGCTTCC AGAACCTGCT TTAGGCATCA ACTTTGCCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Fox-037812	Fusarium oxysporum	43.18	3.00e-06	45.80
IUUC-Ggr-039960	Gaeumannomyces graminis	48.89	2.00e-05	43.90
IUUC-Olo-080963	Oryza longistaminata	45.75	7.00e-34	136.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence