iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113935

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G277800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g031080	Sb02g031080.1	Sb02g031080.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.80e-09	36.6	135	178

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl ++   ++++vlp C H fh++C+ +w     +  ++ +CP+Cr
   Q: 135  CAVCLAEYagGEEVRVLPtCRHGFHRECVDRW-----LLTRAPTCPVCR 178
           ********99555*******************.....8999*******8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MHVCGGDGCA RGHYFGRGLL AGATHAQAPE PSLIDAQRLQ LELVLAAITI MVFVASVSYI 60
ALSTIFSCFY TGRSQQQPGN SEMWSQAQRS VPAVVEETKR ALEEIPVVMV QVTRDSNSGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCACGTAT GCGGCGGCGA CGGTTGTGCT CGGGGCCACT ACTTCGGGCG CGGCCTCCTC 60
GCCGGGGCAA CGCATGCACA GGCGCCAGAA CCTTCGCTTA TTGACGCGCA GCGCTTGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_02g031080

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014543	Brachypodium distachyon	51.27	4.00e-31	126.00
IUUC-Fox-037731	Fusarium oxysporum	36.47	3.00e-11	60.80
IUUC-Hvu-047254	Hordeum vulgare	50.62	9.00e-38	149.00
IUUC-Lpe-051345	Leersia perrieri	48.10	4.00e-34	136.00
IUUC-Ogl-077933	Oryza glaberrima	51.27	3.00e-33	134.00
IUUC-Ogu-078484	Oryza glumaepatula	51.03	9.00e-32	128.00
IUUC-Oin-079346	Oryza indica	51.03	1.00e-31	128.00
IUUC-Ome-081658	Oryza meridionalis	50.63	6.00e-34	136.00
IUUC-Oni-082719	Oryza nivara	51.03	9.00e-32	128.00
IUUC-Opu-083696	Oryza punctata	52.53	8.00e-35	139.00
IUUC-Oru-085000	Oryza rufipogon	50.00	5.00e-33	132.00
IUUC-Osa-085578	Oryza sativa	49.37	3.00e-33	133.00
IUUC-Pop-099750	Populus trichocarpa	53.06	5.00e-15	73.20
IUUC-Ptt-103814	Puccinia triticina	45.90	7.00e-10	56.60
IUUC-Sja-107932	Schizosaccharomyces japonicus	52.54	2.00e-14	73.60
IUUC-Sit-110643	Setaria italica	54.17	1.00e-34	137.00
IUUC-Tae-123646	Triticum aestivum	49.21	1.00e-35	142.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence