iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126489

Ensembl Protein ID

TRIUR3_31770-P1

UniProt Accession

M7Z236; M7Z236_TRIUA

Genbank Protein ID

EMS57183.1

Protein Name

DNA repair protein RAD16

Genbank Nucleotide ID

KD149329

Gene Name

TRIUR3_31770

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_31770	TRIUR3_31770-T1	TRIUR3_31770-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.70e-06	27.8	340	379

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C iC+e  +d ++v++C Hvf+++Cl  +    + + ++ +CP C
   Q: 340  CGICHELAED-VVVTSCDHVFCKTCLMEY----SATLGNVSCPSC 379
           9*****9999.99*************999....7899999***** PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MRRVGCTLVI CPVVAVIQWA QEIERHTAKG SARVLLYHGA RRGSQKYDFD TFDFVVTTYS 60
TIEADYRKHI MPPKIRCDYC NKQFYPEKLK IHLRYYCGPD ALRTEKQAKQ ESKKWADTKV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGCCGGG TAGGGTGCAC CCTTGTGATC TGCCCCGTGG TGGCCGTCAT CCAGTGGGCG 60
CAGGAGATCG AGCGGCACAC GGCCAAAGGC AGCGCGCGCG TGCTGCTCTA CCATGGCGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0732--Signal

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF00176--SNF2_N

SMART

SM00490--HELICc
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000449	Aegilops tauschii	91.19	0.00e+00	1087.00
IUUC-Atr-002602	Amborella trichopoda	59.70	2.00e-161	562.00
IUUC-Aly-005572	Arabidopsis lyrata	55.54	0.00e+00	680.00
IUUC-Ath-007571	Arabidopsis thaliana	56.80	0.00e+00	690.00
IUUC-Ago-007980	Ashbya gossypii	40.69	2.00e-97	348.00
IUUC-Acl-008061	Aspergillus clavatus	38.30	2.00e-87	316.00
IUUC-Afl-008389	Aspergillus flavus	37.84	1.00e-88	320.00
IUUC-Afu-008775	Aspergillus fumigatus	37.26	3.00e-83	302.00
IUUC-Ani-009475	Aspergillus nidulans	39.64	1.00e-64	240.00
IUUC-Ang-009813	Aspergillus niger	38.22	3.00e-86	312.00
IUUC-Aor-009994	Aspergillus oryzae	37.84	2.00e-88	319.00
IUUC-Ate-010405	Aspergillus terreus	38.30	2.00e-86	313.00
IUUC-Bgr-012279	Blumeria graminis	35.94	8.00e-79	288.00
IUUC-Bci-013844	Botrytis cinerea	36.29	1.00e-79	290.00
IUUC-Bdi-015009	Brachypodium distachyon	80.74	0.00e+00	976.00
IUUC-Bol-016388	Brassica oleracea	54.92	6.00e-142	498.00
IUUC-Bra-017729	Brassica rapa	50.79	1.00e-172	598.00
IUUC-Cgl-026730	Colletotrichum gloeosporioides	36.25	1.00e-82	300.00
IUUC-Cne-026934	Cryptococcus neoformans	41.74	7.00e-86	311.00
IUUC-Dse-031540	Dothistroma septosporum	36.85	2.00e-89	323.00
IUUC-Fox-037709	Fusarium oxysporum	38.51	4.00e-86	311.00
IUUC-Fso-038218	Fusarium solani	38.04	7.00e-84	304.00
IUUC-Ggr-040094	Gaeumannomyces graminis	36.33	1.00e-85	310.00
IUUC-Gma-042935	Glycine max	58.48	0.00e+00	692.00
IUUC-Hvu-047660	Hordeum vulgare	86.89	0.00e+00	868.00
IUUC-Kpa-049222	Komagataella pastoris	39.92	1.00e-95	343.00
IUUC-Lpe-050970	Leersia perrieri	71.47	0.00e+00	845.00
IUUC-Lma-053125	Leptosphaeria maculans	35.95	2.00e-84	307.00
IUUC-Meu-056270	Macropus eugenii	30.59	4.00e-56	212.00
IUUC-Mor-056942	Magnaporthe oryzae	35.91	1.00e-85	310.00
IUUC-Mpo-057611	Magnaporthe poae	36.46	3.00e-85	309.00
IUUC-Mtr-058123	Medicago truncatula	58.25	0.00e+00	689.00
IUUC-Mla-059170	Melampsora laricipopulina	43.49	1.00e-101	363.00
IUUC-Mvi-060400	Microbotryum violaceum	43.43	5.00e-103	368.00
IUUC-Mdo-062919	Monodelphis domestica	33.54	7.00e-58	218.00
IUUC-Mac-065269	Musa acuminata	67.53	9.00e-151	525.00
IUUC-Nfi-068347	Neosartorya fischeri	37.79	6.00e-87	314.00
IUUC-Ncr-068941	Neurospora crassa	38.44	8.00e-87	314.00
IUUC-Obr-076549	Oryza brachyantha	76.95	0.00e+00	936.00
IUUC-Ogl-077889	Oryza glaberrima	77.45	0.00e+00	938.00
IUUC-Ogu-078593	Oryza glumaepatula	79.68	0.00e+00	885.00
IUUC-Oin-080110	Oryza indica	67.91	0.00e+00	773.00
IUUC-Olo-080282	Oryza longistaminata	76.79	0.00e+00	877.00
IUUC-Ome-081180	Oryza meridionalis	79.07	0.00e+00	926.00
IUUC-Oni-082941	Oryza nivara	79.68	0.00e+00	886.00
IUUC-Opu-083720	Oryza punctata	83.36	0.00e+00	973.00
IUUC-Oru-085272	Oryza rufipogon	79.93	0.00e+00	889.00
IUUC-Osa-085537	Oryza sativa	77.24	0.00e+00	919.00
IUUC-Olu-087669	Ostreococcus lucimarinus	36.00	3.00e-93	336.00
IUUC-Pop-099503	Populus trichocarpa	59.07	0.00e+00	693.00
IUUC-Ppe-102071	Prunus persica	58.81	0.00e+00	715.00
IUUC-Pgr-103403	Puccinia graminis	43.43	2.00e-101	362.00
IUUC-Ptt-103966	Puccinia triticina	43.46	3.00e-101	362.00
IUUC-Pte-104264	Pyrenophora teres	36.40	5.00e-84	305.00
IUUC-Pyt-104815	Pyrenophora triticirepentis	36.40	7.00e-84	304.00
IUUC-Sce-106159	Saccharomyces cerevisiae	41.45	1.00e-99	356.00
IUUC-Sja-107959	Schizosaccharomyces japonicus	43.13	8.00e-99	354.00
IUUC-Spo-108338	Schizosaccharomyces pombe	43.19	2.00e-98	353.00
IUUC-Ssl-108523	Sclerotinia sclerotiorum	36.50	6.00e-80	291.00
IUUC-Smo-109139	Selaginella moellendorffii	52.64	2.00e-127	448.00
IUUC-Sit-110565	Setaria italica	76.01	0.00e+00	877.00
IUUC-Sly-110871	Solanum lycopersicum	53.40	1.00e-159	556.00
IUUC-Stu-112856	Solanum tuberosum	56.99	0.00e+00	671.00
IUUC-Sbi-114800	Sorghum bicolor	74.51	0.00e+00	928.00
IUUC-Sre-114938	Sporisorium reilianum	42.32	5.00e-99	355.00
IUUC-Tca-121230	Theobroma cacao	57.03	0.00e+00	694.00
IUUC-Tre-122065	Trichoderma reesei	37.93	1.00e-84	306.00
IUUC-Tvi-122398	Trichoderma virens	37.93	1.00e-84	306.00
IUUC-Tae-125864	Triticum aestivum	90.26	0.00e+00	1103.00
IUUC-Uma-129441	Ustilago maydis	42.00	2.00e-98	353.00
IUUC-Vda-129735	Verticillium dahliae	38.14	2.00e-88	320.00
IUUC-Vvi-131253	Vitis vinifera	56.68	0.00e+00	679.00
IUUC-Yli-134350	Yarrowia lipolytica	41.03	2.00e-101	362.00
IUUC-Zma-135113	Zea mays	74.72	0.00e+00	919.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence