iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-036988

Ensembl Protein ID

ENSFALP00000000119.1

UniProt Accession

U3JBG5; U3JBG5_FICAL

Genbank Protein ID

ENSFALP00000000119

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01011670

Gene Name

USP39

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000000111.1	ENSFALT00000000120.1	ENSFALP00000000119.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	5.70e-51	173.3	144	474

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaee.fsg 86
           +Gl+N+ +  Y N+vLQ+Lsn+p+lr+++le+++ +  ++ p +    l++ + +l+++lw   + k +vsp+e+l+a+  ++++ f+ 
   Q: 144  VGLNNIKANDYANAVLQALSNVPPLRNYFLEEENYRHIQRPPGDIMFLLVQRFGELMRKLWnpRNFKAHVSPHEMLQAVVLCSKKnFQI 232
           6******************************99999999999*******************999999**************99999*** PP
   S: 87   yeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlk................sqikclec 159
           ++q D  Efl+++l++l+ +l                          +k+k+k++++d+Fqg+++                 q+  ++ 
   Q: 233  TKQGDGVEFLSWFLNALHAAL------------------------GGTKRKKKTIVTDVFQGSMRiftkklphpdlpaeekAQLLQNSE 297
           *********************........................46788899999999999999999999999999996677777777 PP
   S: 160  dnvssreepfldlslpvpgkeetkke.........slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsf 239
            ++   e++fl+l+l++p     k e          l ++L++f    e e    y++ k     +  k+++l++lP++Li+ +kRf  
   Q: 298  YQERMVESTFLYLTLDLPTAPLYKDEkeqliipqvPLFSILAKFNGSTEKE----YKTYK----ENFLKRFQLTRLPPYLIFCIKRF-- 376
           7777999***********776665555556677777777777777777776....44444....34899******************.. PP
   S: 240  seeqksrekinkkvefple.LdlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvkn.ekgkWllfdDskVtevkeeevleet 326
           ++++ + ek+ + v+fp++ +dl+++++++ ++ + +++Y+Lia +vH G++s+G Y  +v +  +gkW+++ D +Vt +  + +    
   Q: 377  TKNNFFVEKNPTIVNFPITnVDLREYLSEEVQAAHAHTTYDLIANIVHDGKPSEGSYRIHVLHhGTGKWYELQDLQVTDILPQMITL-- 463
           88889********************************************************9935666******************9.. PP
   S: 327  gstaYvlfYkrr 338
            s+aY+ ++krr
   Q: 464  -SEAYIQIWKRR 474
           .********985 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

LLTPSCPPVR YGRFDPEDQR SRHCPYLDTI NKSVLDFDFE KLCSISLSHI NVYACLVCGK 60
YFQGRGLKSH AYIHSVQLSH HVFLNLHTLK FYCLPDNYEI IDSSLEDITY VLKPTFTAQH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC 60
CCCCCCCCCC CGGGGATACG GGGGAGTGAG GGGAACACCG GGATGGGCAG CGGGGAACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR033809--USP39
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

SMART

SM00290--ZnF_UBP

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0000245--P:spliceosomal complex assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000483	Aegilops tauschii	54.00	1.00e-132	466.00
IUUC-Aml-001846	Ailuropoda melanoleuca	93.87	0.00e+00	916.00
IUUC-Atr-002758	Amborella trichopoda	51.14	1.00e-133	469.00
IUUC-Apl-003336	Anas platyrhynchos	90.42	3.00e-174	604.00
IUUC-Aca-004846	Anolis carolinensis	93.85	0.00e+00	875.00
IUUC-Aly-005683	Arabidopsis lyrata	51.09	4.00e-119	421.00
IUUC-Ath-007661	Arabidopsis thaliana	50.87	3.00e-119	422.00
IUUC-Ago-007802	Ashbya gossypii	31.90	1.00e-58	220.00
IUUC-Acl-008304	Aspergillus clavatus	42.15	5.00e-94	338.00
IUUC-Afl-008735	Aspergillus flavus	57.26	7.00e-40	158.00
IUUC-Afu-009100	Aspergillus fumigatus	41.39	7.00e-92	331.00
IUUC-Ani-009138	Aspergillus nidulans	42.41	2.00e-97	349.00
IUUC-Ang-009661	Aspergillus niger	45.38	4.00e-98	351.00
IUUC-Aor-010235	Aspergillus oryzae	39.29	1.00e-82	300.00
IUUC-Ate-010346	Aspergillus terreus	37.30	2.00e-74	273.00
IUUC-Ame-011688	Astyanax mexicanus	89.37	0.00e+00	845.00
IUUC-Bgr-011998	Blumeria graminis	46.96	2.00e-116	412.00
IUUC-Bta-013407	Bos taurus	92.86	0.00e+00	911.00
IUUC-Bci-013977	Botrytis cinerea	47.61	1.00e-115	409.00
IUUC-Bdi-014361	Brachypodium distachyon	52.24	1.00e-137	483.00
IUUC-Bol-016317	Brassica oleracea	51.31	5.00e-119	421.00
IUUC-Bra-017952	Brassica rapa	51.09	3.00e-119	421.00
IUUC-Cel-018491	Caenorhabditis elegans	61.97	1.00e-179	622.00
IUUC-Cja-019134	Callithrix jacchus	93.45	0.00e+00	912.00
IUUC-Cfa-020098	Canis familiaris	93.45	0.00e+00	912.00
IUUC-Cpo-021595	Cavia porcellus	93.02	0.00e+00	907.00
IUUC-Cre-022886	Chlamydomonas reinhardtii	51.61	8.00e-32	128.00
IUUC-Csa-024121	Chlorocebus sabaeus	93.45	0.00e+00	912.00
IUUC-Cho-025057	Choloepus hoffmanni	72.91	4.00e-81	295.00
IUUC-Cin-025473	Ciona intestinalis	64.06	1.00e-65	242.00
IUUC-Csv-025815	Ciona savignyi	78.60	3.00e-118	418.00
IUUC-Cgl-026416	Colletotrichum gloeosporioides	43.63	7.00e-110	390.00
IUUC-Cne-026802	Cryptococcus neoformans	43.98	1.00e-105	377.00
IUUC-Dre-027870	Danio rerio	87.74	0.00e+00	840.00
IUUC-Dno-029655	Dasypus novemcinctus	92.44	0.00e+00	908.00
IUUC-Dor-030762	Dipodomys ordii	93.45	0.00e+00	910.00
IUUC-Dse-031441	Dothistroma septosporum	44.52	9.00e-109	387.00
IUUC-Dme-032101	Drosophila melanogaster	64.72	0.00e+00	629.00
IUUC-Ete-032841	Echinops telfairi	88.16	0.00e+00	866.00
IUUC-Eca-033463	Equus caballus	93.45	0.00e+00	910.00
IUUC-Eeu-034438	Erinaceus europaeus	67.02	1.00e-179	622.00
IUUC-Fca-035774	Felis catus	93.45	0.00e+00	913.00
IUUC-Fox-037895	Fusarium oxysporum	43.97	2.00e-107	382.00
IUUC-Fso-038450	Fusarium solani	45.45	1.00e-109	389.00
IUUC-Gmo-038874	Gadus morhua	87.89	0.00e+00	827.00
IUUC-Ggr-040115	Gaeumannomyces graminis	42.28	3.00e-103	369.00
IUUC-Gac-041650	Gasterosteus aculeatus	87.26	0.00e+00	850.00
IUUC-Gma-043697	Glycine max	51.39	9.00e-133	466.00
IUUC-Ggo-044707	Gorilla gorilla	86.47	0.00e+00	831.00
IUUC-Hsa-046041	Homo sapiens	93.45	0.00e+00	911.00
IUUC-Hvu-047816	Hordeum vulgare	51.82	4.00e-125	441.00
IUUC-Itr-048945	Ictidomys tridecemlineatus	91.74	0.00e+00	635.00
IUUC-Lch-050419	Latimeria chalumnae	90.57	0.00e+00	905.00
IUUC-Lpe-051593	Leersia perrieri	54.88	3.00e-137	481.00
IUUC-Loc-052930	Lepisosteus oculatus	87.29	0.00e+00	854.00
IUUC-Lma-053256	Leptosphaeria maculans	46.54	4.00e-113	401.00
IUUC-Laf-053555	Loxodonta africana	93.23	0.00e+00	906.00
IUUC-Mcc-055630	Macaca mulatta	93.45	0.00e+00	912.00
IUUC-Meu-056579	Macropus eugenii	89.20	3.00e-169	588.00
IUUC-Mor-057078	Magnaporthe oryzae	43.82	3.00e-105	375.00
IUUC-Mpo-057607	Magnaporthe poae	38.16	8.00e-86	310.00
IUUC-Mtr-058644	Medicago truncatula	50.54	2.00e-132	465.00
IUUC-Mla-059120	Melampsora laricipopulina	41.51	2.00e-102	366.00
IUUC-Mvi-060429	Microbotryum violaceum	46.23	4.00e-73	268.00
IUUC-Mmr-061313	Microcebus murinus	92.86	0.00e+00	911.00
IUUC-Mdo-062801	Monodelphis domestica	93.49	0.00e+00	919.00
IUUC-Mmu-064424	Mus musculus	92.65	0.00e+00	930.00
IUUC-Mac-064694	Musa acuminata	52.90	1.00e-133	469.00
IUUC-Mpu-065980	Mustela putorius furo	93.82	0.00e+00	807.00
IUUC-Mlu-067007	Myotis lucifugus	93.45	0.00e+00	908.00
IUUC-Nfi-068274	Neosartorya fischeri	41.39	5.00e-92	331.00
IUUC-Ncr-068829	Neurospora crassa	48.18	2.00e-109	389.00
IUUC-Nle-069171	Nomascus leucogenys	92.68	0.00e+00	910.00
IUUC-Opr-070494	Ochotona princeps	85.08	0.00e+00	816.00
IUUC-Ont-072290	Oreochromis niloticus	88.15	0.00e+00	867.00
IUUC-Oan-073099	Ornithorhynchus anatinus	93.07	0.00e+00	911.00
IUUC-Ocu-074642	Oryctolagus cuniculus	93.45	0.00e+00	911.00
IUUC-Oba-075886	Oryza barthii	54.23	6.00e-137	480.00
IUUC-Obr-076220	Oryza brachyantha	54.01	2.00e-136	479.00
IUUC-Ogl-077682	Oryza glaberrima	54.23	5.00e-137	481.00
IUUC-Ogu-078492	Oryza glumaepatula	54.01	8.00e-137	480.00
IUUC-Oin-079956	Oryza indica	54.23	4.00e-137	481.00
IUUC-Olo-080239	Oryza longistaminata	48.53	1.00e-109	391.00
IUUC-Ome-081573	Oryza meridionalis	54.23	3.00e-137	481.00
IUUC-Oni-082975	Oryza nivara	54.23	4.00e-137	481.00
IUUC-Opu-083724	Oryza punctata	54.45	5.00e-137	481.00
IUUC-Oru-084566	Oryza rufipogon	54.23	5.00e-137	481.00
IUUC-Osa-086008	Oryza sativa	54.23	4.00e-137	481.00
IUUC-Ola-086967	Oryzias latipes	89.18	0.00e+00	852.00
IUUC-Olu-087614	Ostreococcus lucimarinus	43.63	2.00e-98	352.00
IUUC-Oga-088047	Otolemur garnettii	75.13	4.00e-165	574.00
IUUC-Oar-089393	Ovis aries	93.45	0.00e+00	911.00
IUUC-Ptr-090561	Pan troglodytes	93.45	0.00e+00	911.00
IUUC-Pan-091812	Papio anubis	93.45	0.00e+00	912.00
IUUC-Psi-093507	Pelodiscus sinensis	93.58	8.00e-162	562.00
IUUC-Pno-095104	Phaeosphaeria nodorum	45.57	3.00e-111	395.00
IUUC-Ppa-095995	Physcomitrella patens	51.76	5.00e-138	484.00
IUUC-Pfo-096754	Poecilia formosa	87.90	0.00e+00	857.00
IUUC-Pab-098053	Pongo abelii	93.45	0.00e+00	911.00
IUUC-Pop-099230	Populus trichocarpa	51.56	1.00e-136	479.00
IUUC-Pca-100407	Procavia capensis	85.50	0.00e+00	820.00
IUUC-Ppe-101699	Prunus persica	52.49	1.00e-131	462.00
IUUC-Pva-103159	Pteropus vampyrus	91.12	0.00e+00	868.00
IUUC-Pgr-103433	Puccinia graminis	43.03	3.00e-108	385.00
IUUC-Ptt-103701	Puccinia triticina	40.29	4.00e-96	345.00
IUUC-Pte-104281	Pyrenophora teres	46.22	4.00e-112	398.00
IUUC-Pyt-104714	Pyrenophora triticirepentis	46.22	6.00e-112	397.00
IUUC-Rno-105531	Rattus norvegicus	92.65	0.00e+00	931.00
IUUC-Sce-106368	Saccharomyces cerevisiae	31.26	4.00e-48	185.00
IUUC-Sha-107093	Sarcophilus harrisii	93.28	0.00e+00	915.00
IUUC-Sja-108004	Schizosaccharomyces japonicus	44.13	8.00e-116	410.00
IUUC-Spo-108018	Schizosaccharomyces pombe	46.30	4.00e-113	401.00
IUUC-Ssl-108460	Sclerotinia sclerotiorum	44.92	5.00e-108	384.00
IUUC-Smo-108892	Selaginella moellendorffii	53.15	1.00e-137	482.00
IUUC-Sit-110782	Setaria italica	54.19	9.00e-139	486.00
IUUC-Sly-111308	Solanum lycopersicum	52.29	4.00e-138	484.00
IUUC-Stu-112447	Solanum tuberosum	52.51	2.00e-138	485.00
IUUC-Sar-113352	Sorex araneus	86.90	0.00e+00	734.00
IUUC-Sbi-114806	Sorghum bicolor	54.53	2.00e-138	485.00
IUUC-Sre-115059	Sporisorium reilianum	50.55	6.00e-72	265.00
IUUC-Ssc-115677	Sus scrofa	91.45	0.00e+00	635.00
IUUC-Tru-118478	Takifugu rubripes	86.34	0.00e+00	864.00
IUUC-Tsy-119082	Tarsius syrichta	81.19	0.00e+00	689.00
IUUC-Tni-120419	Tetraodon nigroviridis	85.15	0.00e+00	839.00
IUUC-Tca-121294	Theobroma cacao	51.92	2.00e-137	482.00
IUUC-Tre-121962	Trichoderma reesei	45.47	3.00e-104	372.00
IUUC-Tvi-122280	Trichoderma virens	45.14	5.00e-112	397.00
IUUC-Tae-124442	Triticum aestivum	54.84	2.00e-138	485.00
IUUC-Tur-126551	Triticum urartu	54.84	4.00e-138	484.00
IUUC-Tme-126959	Tuber melanosporum	46.58	3.00e-115	408.00
IUUC-Tbe-127737	Tupaia belangeri	94.03	0.00e+00	872.00
IUUC-Ttr-129211	Tursiops truncatus	93.47	2.00e-140	492.00
IUUC-Uma-129591	Ustilago maydis	39.73	6.00e-97	347.00
IUUC-Vda-129674	Verticillium dahliae	43.46	3.00e-97	348.00
IUUC-Vpa-130793	Vicugna pacos	87.17	0.00e+00	804.00
IUUC-Xtr-132430	Xenopus tropicalis	88.80	0.00e+00	883.00
IUUC-Xma-133515	Xiphophorus maculatus	87.96	0.00e+00	848.00
IUUC-Yli-134488	Yarrowia lipolytica	38.16	3.00e-79	288.00
IUUC-Zma-134748	Zea mays	54.29	3.00e-138	484.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence